##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548180_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1485553 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.084493114685237 31.0 31.0 33.0 30.0 34.0 2 31.476911291620024 31.0 31.0 34.0 30.0 34.0 3 31.5516921981242 31.0 31.0 34.0 30.0 34.0 4 35.381562286905954 37.0 35.0 37.0 33.0 37.0 5 35.234808182542125 37.0 35.0 37.0 33.0 37.0 6 35.283159873797835 37.0 35.0 37.0 32.0 37.0 7 35.71120855331314 37.0 35.0 37.0 35.0 37.0 8 35.707111762421135 37.0 35.0 37.0 35.0 37.0 9 37.41640453083801 39.0 37.0 39.0 35.0 39.0 10 36.743027680601095 39.0 37.0 39.0 32.0 39.0 11 36.44007988944185 39.0 35.0 39.0 32.0 39.0 12 35.84844229724554 37.0 35.0 39.0 31.0 39.0 13 35.57379979038109 37.0 35.0 39.0 30.0 39.0 14 36.4770230345198 38.0 35.0 40.0 30.0 41.0 15 36.72377155173864 38.0 35.0 41.0 31.0 41.0 16 36.81757298460573 38.0 35.0 41.0 31.0 41.0 17 36.68372653146673 38.0 35.0 40.0 31.0 41.0 18 36.6109219933587 38.0 35.0 40.0 31.0 41.0 19 36.5243575961275 38.0 35.0 40.0 31.0 41.0 20 36.36537572203752 38.0 35.0 40.0 30.0 41.0 21 36.22413067726295 38.0 34.0 40.0 30.0 41.0 22 36.143910718769376 38.0 34.0 40.0 30.0 41.0 23 36.06507139092311 38.0 34.0 40.0 30.0 41.0 24 35.89104259491247 38.0 34.0 40.0 30.0 41.0 25 35.75882651107029 37.0 34.0 40.0 29.0 41.0 26 35.696219522292374 37.0 34.0 40.0 29.0 41.0 27 35.67519637468337 37.0 34.0 40.0 29.0 41.0 28 35.67618859778143 37.0 34.0 40.0 29.0 41.0 29 35.677693761178496 37.0 34.0 40.0 29.0 41.0 30 35.604195878571815 37.0 34.0 40.0 29.0 41.0 31 35.437786467396315 37.0 34.0 40.0 28.0 41.0 32 35.25673133169937 37.0 34.0 40.0 27.0 41.0 33 35.093516017267646 37.0 34.0 40.0 26.0 41.0 34 34.88941559136564 37.0 34.0 40.0 25.0 41.0 35 34.69707105704071 37.0 33.0 40.0 24.0 41.0 36 34.51577089474425 37.0 33.0 40.0 24.0 41.0 37 34.43085706130983 37.0 33.0 40.0 23.0 41.0 38 34.35000501496749 37.0 33.0 40.0 23.0 41.0 39 34.294505817025716 37.0 33.0 40.0 23.0 41.0 40 34.14600219581529 37.0 33.0 40.0 23.0 41.0 41 34.07970297929458 36.0 33.0 40.0 23.0 41.0 42 34.03659378022864 36.0 33.0 40.0 23.0 41.0 43 33.91636851731308 36.0 33.0 40.0 23.0 41.0 44 33.76094895301615 36.0 33.0 40.0 22.0 41.0 45 33.66853892119635 36.0 32.0 40.0 23.0 41.0 46 33.549797954027895 35.0 32.0 40.0 22.0 41.0 47 33.504492939666235 35.0 32.0 40.0 22.0 41.0 48 33.38247709775417 35.0 32.0 40.0 22.0 41.0 49 33.26437764253446 35.0 32.0 39.0 21.0 41.0 50 33.125238884105784 35.0 32.0 39.0 20.0 41.0 51 32.78295220702324 35.0 31.0 39.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 2.0 12 2.0 13 15.0 14 24.0 15 84.0 16 221.0 17 537.0 18 1097.0 19 2112.0 20 3512.0 21 5409.0 22 7877.0 23 11387.0 24 15666.0 25 21439.0 26 28429.0 27 33726.0 28 36679.0 29 40887.0 30 47127.0 31 56197.0 32 68414.0 33 85079.0 34 129003.0 35 161708.0 36 119140.0 37 145951.0 38 199456.0 39 264320.0 40 51.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.102998681299155 25.04851728615539 29.27973623290451 15.568747799640942 2 31.85110191289035 25.235720300790344 29.408442512653536 13.504735273665766 3 29.09939934825617 24.84946683154354 32.4525614367175 13.598572383482784 4 26.261735528789615 27.676023676031754 31.73289677312085 14.32934402205778 5 23.338043139490814 31.52381638352856 30.976074229596655 14.16206624738397 6 22.191197486727166 40.56240336090332 27.26520023183286 9.981198920536661 7 86.94587133545555 3.654329397874058 7.88029777463342 1.519501492036972 8 87.82392819374334 2.905382709334504 7.5193547453372584 1.7513343515848978 9 82.41173488929712 5.748229783790952 9.103074747249003 2.736960579662927 10 42.30424629750672 34.0941050235165 14.019627707661725 9.58202097131506 11 36.60232923362546 21.861017412371016 25.956327374385165 15.580325979618365 12 34.45417295781436 20.216377335578066 28.60759595921519 16.721853747392384 13 24.998165666253577 28.636002889159794 28.816743663807348 17.549087780779278 14 19.14250114267212 31.010270249529974 30.950292584646927 18.896936023150975 15 18.696337323542142 24.650147116932214 39.713022692559605 16.94049286696604 16 22.97986002518927 22.53470593105732 37.193624192472434 17.29180985128097 17 22.20728577169579 22.860981735421085 29.232615732996397 25.69911675988672 18 23.942801098311538 24.363721792490743 32.2583576620962 19.435119447101517 19 27.097518567159838 25.37021567052808 27.85831269567629 19.67395306663579 20 28.54566615933595 25.658593129965745 27.809643950771196 17.98609675992711 21 25.69662610489158 25.650448014981624 30.173746746161196 18.4791791339656 22 24.75421610672928 23.102306009950503 29.89075448671303 22.252723396607188 23 22.26019536159262 26.097890819109114 29.82330485684456 21.818608962453713 24 22.496807586131226 24.04135025811937 34.031367443638835 19.430474712110573 25 21.7477935825918 25.565833060146627 31.601699838376685 21.084673518884887 26 20.433737470154213 29.93491312662692 28.104618280195993 21.526731123022874 27 19.632823601715994 29.03767149337654 31.384945538799357 19.94455936610811 28 18.92116942310372 27.062582082227966 34.10608709349313 19.910161401175188 29 19.948127061101154 25.289639615685207 33.89774716889939 20.864486154314253 30 21.531577803013423 26.824219667692773 31.6260005533293 20.018201975964505 31 26.166888693974567 25.901936854491225 28.249480159913514 19.681694291620698 32 27.200914406958216 25.063124641126905 28.45452164951368 19.281439302401193 33 26.434869708452002 25.979079844340795 27.77033199084785 19.81571845635935 34 21.341076353384903 26.166821378974696 30.098219316308473 22.39388295133193 35 21.595527052888723 26.562835523202473 30.923299269699566 20.91833815420924 36 26.193410803922852 26.499155533326647 27.618738611143463 19.688695051607045 37 21.511921823051754 29.496490532481843 29.050394028351732 19.94119361611467 38 21.94765181720208 29.77719408193447 26.725805137884677 21.54934896297877 39 21.585227857908805 28.921418488603233 28.071230040261103 21.42212361322686 40 24.131013837944522 25.67636428993109 27.78891093081162 22.403710941312763 41 19.976130101046547 25.06622113112087 28.69140313405176 26.266245633780823 42 21.974577817149573 25.658054609966797 27.461423456450223 24.90594411643341 43 21.98157857713592 26.016439669267942 28.038851525324237 23.963130228271893 44 21.19742614366502 27.540922471295204 28.571582434285414 22.690068950754366 45 20.498427185028067 30.010171296480166 26.62792912807554 22.863472390416227 46 22.254338956604037 29.002533063445064 27.395050866579652 21.34807711337125 47 21.684248222715716 26.96369634742079 28.683459964067254 22.66859546579624 48 22.233875196643943 25.650515329981495 30.60139894032727 21.51421053304729 49 22.14777931181183 24.924051851398097 30.40133876071739 22.52683007607268 50 20.147312145712743 28.422075819576953 29.38097799270709 22.049634042003213 51 19.672674081638284 28.946325038554665 28.37953273965991 23.00146814014714 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 914.0 1 1542.0 2 2170.0 3 11047.5 4 19925.0 5 13946.0 6 7967.0 7 7895.0 8 7823.0 9 8310.5 10 8798.0 11 9043.0 12 9288.0 13 8980.0 14 8672.0 15 8270.5 16 7869.0 17 7483.5 18 7098.0 19 6884.0 20 6670.0 21 6866.5 22 7063.0 23 7378.5 24 7694.0 25 9378.5 26 12563.5 27 14064.0 28 16330.5 29 18597.0 30 21494.0 31 24391.0 32 28421.5 33 32452.0 34 37239.5 35 42027.0 36 45504.0 37 48981.0 38 53337.5 39 57694.0 40 71807.0 41 85920.0 42 96735.5 43 107551.0 44 111908.5 45 116266.0 46 116305.5 47 116345.0 48 111377.5 49 106410.0 50 104065.5 51 101721.0 52 96728.0 53 91735.0 54 84742.5 55 77750.0 56 75593.5 57 73437.0 58 69058.0 59 64679.0 60 60002.5 61 55326.0 62 49122.0 63 42918.0 64 37706.0 65 32494.0 66 27191.0 67 21888.0 68 18494.5 69 15101.0 70 12957.0 71 10813.0 72 8453.0 73 6093.0 74 5047.5 75 3140.0 76 2278.0 77 1539.5 78 801.0 79 603.0 80 405.0 81 286.0 82 167.0 83 132.0 84 97.0 85 79.0 86 61.0 87 44.0 88 27.0 89 25.5 90 24.0 91 20.5 92 17.0 93 11.0 94 5.0 95 3.5 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1485553.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.027208290139047 #Duplication Level Percentage of deduplicated Percentage of total 1 80.5119718614513 20.14989889626356 2 5.437288893930852 2.7216032336413436 3 1.904337059356073 1.42980720717406 4 1.0714603336070658 1.0726264377522363 5 0.695746423680745 0.8706295331288669 6 0.5519242155011063 0.8287873381030666 7 0.47434973596900365 0.83101547511281 8 0.4060992219823165 0.813082385201188 9 0.3858276177119161 0.869056933730784 >10 7.120037437056692 44.197901760330396 >50 1.3643375742715809 22.489282805244752 >100 0.075270688414635 2.674747498038141 >500 8.093622400966663E-4 0.12531759863191705 >1k 2.6978741336555545E-4 0.09837701573637023 >5k 0.0 0.0 >10k+ 2.6978741336555545E-4 0.8278658819105252 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12261 0.825349213390569 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.731499986873575E-5 0.0 0.0 0.02201200495707659 0.0 2 6.731499986873575E-5 0.0 0.0 0.07640252485101508 0.0 3 6.731499986873575E-5 0.0 0.0 0.12338839475939263 0.0 4 6.731499986873575E-5 0.0 0.0 0.1931940496232716 0.0 5 6.731499986873575E-5 0.0 0.0 0.3406138993358029 0.0 6 6.731499986873575E-5 0.0 0.0 0.5708311988868792 0.0 7 1.346299997374715E-4 0.0 0.0 0.707682593620019 0.0 8 1.346299997374715E-4 0.0 0.0 1.013360008023948 0.0 9 1.346299997374715E-4 0.0 0.0 1.1584911477409423 0.0 10 1.346299997374715E-4 0.0 0.0 1.3649462523383549 0.0 11 1.346299997374715E-4 0.0 0.0 1.580152306918703 0.0 12 1.346299997374715E-4 0.0 0.0 1.7492475865889672 0.0 13 1.346299997374715E-4 0.0 0.0 1.8253135364406385 0.0 14 1.346299997374715E-4 0.0 0.0 1.8676546713580733 0.0 15 1.346299997374715E-4 0.0 0.0 1.9149771162657947 0.0 16 1.346299997374715E-4 0.0 0.0 2.0105644160793994 0.0 17 1.346299997374715E-4 0.0 0.0 2.126009640854281 0.0 18 1.346299997374715E-4 0.0 0.0 2.2588221355952967 0.0 19 1.346299997374715E-4 0.0 0.0 2.338792355439355 0.0 20 1.346299997374715E-4 0.0 0.0 2.4298695502617544 0.0 21 1.346299997374715E-4 0.0 0.0 2.544103105038999 0.0 22 1.346299997374715E-4 0.0 0.0 2.667626129798129 0.0 23 1.346299997374715E-4 0.0 0.0 2.800034734539932 0.0 24 1.346299997374715E-4 0.0 0.0 2.9033632593384415 0.0 25 1.346299997374715E-4 0.0 0.0 2.9941038791614973 0.0016828749967183938 26 1.346299997374715E-4 0.0 0.0 3.0853157039836345 0.0016828749967183938 27 1.346299997374715E-4 0.0 0.0 3.1818454137954015 0.0016828749967183938 28 1.346299997374715E-4 0.0 0.0 3.2810004086020492 0.0016828749967183938 29 1.346299997374715E-4 0.0 0.0 3.395233963379294 0.0016828749967183938 30 1.346299997374715E-4 0.0 0.0 3.542653813091825 0.0016828749967183938 31 1.346299997374715E-4 0.0 0.0 3.663416922856337 0.0016828749967183938 32 1.346299997374715E-4 0.0 0.0 3.7866033726161232 0.0016828749967183938 33 1.346299997374715E-4 0.0 0.0 3.9116073273723657 0.0016828749967183938 34 1.346299997374715E-4 0.0 0.0 4.040919442120207 0.0016828749967183938 35 1.346299997374715E-4 0.0 0.0 4.197090241815674 0.0016828749967183938 36 1.346299997374715E-4 0.0 0.0 4.339999986537 0.0016828749967183938 37 1.346299997374715E-4 0.0 0.0 4.482505841259114 0.0016828749967183938 38 1.346299997374715E-4 0.0 0.0 4.649245095933972 0.0016828749967183938 39 1.346299997374715E-4 0.0 0.0 4.901878290441338 0.0016828749967183938 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACGGGT 50 2.1827873E-11 45.000004 4 ACGTATA 20 7.033953E-4 45.000004 39 CGTTTTT 7200 0.0 41.03125 1 CGACGGT 215 0.0 38.720932 28 TAGGGAC 1710 0.0 38.28947 5 AAGGGAT 2365 0.0 38.054966 5 AACGGGA 550 0.0 37.636364 4 CCCCGTA 30 1.14008246E-4 37.500004 38 ACGGTCT 210 0.0 37.500004 30 TAAGGGA 1915 0.0 37.480415 4 CGGGATA 325 0.0 37.384617 6 ATAGGGA 2170 0.0 37.223503 4 GCGTAAG 115 0.0 37.173912 1 ACGGGAA 555 0.0 36.89189 5 GTAGGGA 2225 0.0 36.80899 4 CGGTCTA 215 0.0 36.627907 31 GCGGGAT 720 0.0 36.5625 5 TAGGGAT 2440 0.0 36.516396 5 GGGCGAT 1905 0.0 36.49606 7 ACGTAGG 210 0.0 36.428574 2 >>END_MODULE