##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548178_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1863394 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.146717226737877 31.0 31.0 33.0 30.0 34.0 2 31.538663320800648 31.0 31.0 34.0 30.0 34.0 3 31.56256808812307 31.0 31.0 34.0 30.0 34.0 4 35.42768088767056 37.0 35.0 37.0 33.0 37.0 5 35.31900231513035 37.0 35.0 37.0 33.0 37.0 6 35.37108255151621 37.0 35.0 37.0 33.0 37.0 7 35.76990802803916 37.0 35.0 37.0 35.0 37.0 8 35.76295136723635 37.0 35.0 37.0 35.0 37.0 9 37.51773484298007 39.0 37.0 39.0 35.0 39.0 10 36.79170535055925 39.0 37.0 39.0 32.0 39.0 11 36.53333326177931 39.0 35.0 39.0 32.0 39.0 12 36.06838328340652 38.0 35.0 39.0 31.0 39.0 13 35.89769742738251 38.0 35.0 39.0 31.0 39.0 14 36.846462959524395 39.0 35.0 41.0 31.0 41.0 15 37.02095155399234 39.0 35.0 41.0 31.0 41.0 16 37.081889820402985 39.0 35.0 41.0 32.0 41.0 17 36.910586810948196 39.0 35.0 41.0 31.0 41.0 18 36.794740135473226 38.0 35.0 40.0 31.0 41.0 19 36.69338422255304 38.0 35.0 40.0 31.0 41.0 20 36.533448105982956 38.0 35.0 40.0 31.0 41.0 21 36.40989130586446 38.0 35.0 40.0 30.0 41.0 22 36.35674312571577 38.0 35.0 40.0 30.0 41.0 23 36.27436977901614 38.0 35.0 40.0 30.0 41.0 24 36.10672353780252 38.0 35.0 40.0 30.0 41.0 25 35.98794350523829 38.0 34.0 40.0 30.0 41.0 26 35.937108845472295 38.0 34.0 40.0 30.0 41.0 27 35.927408266850705 38.0 34.0 40.0 30.0 41.0 28 35.927833297735205 38.0 34.0 40.0 30.0 41.0 29 35.89817880705852 38.0 34.0 40.0 30.0 41.0 30 35.78570822917751 38.0 34.0 40.0 29.0 41.0 31 35.64694852511063 38.0 34.0 40.0 29.0 41.0 32 35.446236276385996 38.0 34.0 40.0 28.0 41.0 33 35.22789114916115 38.0 34.0 40.0 27.0 41.0 34 34.90885287813527 38.0 34.0 40.0 24.0 41.0 35 34.676021818252075 38.0 33.0 40.0 24.0 41.0 36 34.52551741606982 37.0 33.0 40.0 23.0 41.0 37 34.45207669446182 37.0 33.0 40.0 23.0 41.0 38 34.35200231405704 37.0 33.0 40.0 23.0 41.0 39 34.28057136601277 37.0 33.0 40.0 23.0 41.0 40 34.159665642370854 37.0 33.0 40.0 23.0 41.0 41 34.07940188709419 37.0 33.0 40.0 22.0 41.0 42 34.02364126964024 37.0 33.0 40.0 22.0 41.0 43 33.92308658286975 37.0 33.0 40.0 22.0 41.0 44 33.7716843566095 36.0 33.0 40.0 21.0 41.0 45 33.68585709731812 36.0 33.0 40.0 20.0 41.0 46 33.57458594371346 36.0 32.0 40.0 20.0 41.0 47 33.5509725801414 36.0 32.0 40.0 20.0 41.0 48 33.44090085081309 36.0 32.0 40.0 20.0 41.0 49 33.335172271672015 36.0 32.0 40.0 20.0 41.0 50 33.225097859067915 35.0 32.0 40.0 20.0 41.0 51 32.88701369651292 35.0 31.0 39.0 19.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 1.0 11 1.0 12 3.0 13 7.0 14 31.0 15 89.0 16 228.0 17 520.0 18 1201.0 19 2222.0 20 3863.0 21 6159.0 22 9173.0 23 13296.0 24 19047.0 25 27515.0 26 38037.0 27 44866.0 28 47126.0 29 50849.0 30 56898.0 31 66294.0 32 80669.0 33 101531.0 34 152907.0 35 185583.0 36 149602.0 37 184537.0 38 258981.0 39 362105.0 40 51.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.069056785628806 24.629520112225325 28.365927978731282 16.935495123414587 2 32.99892561637528 25.37616843244102 29.141072687794424 12.483833263389279 3 27.275820357906056 24.71302365468602 34.90378309686518 13.10737289054274 4 24.16923098389283 27.24034745201498 34.68262750658207 13.907794057510115 5 22.197291608752632 31.27535024798835 33.16942095981848 13.357937183440537 6 20.963467736828605 39.27306839025992 29.83775841287457 9.9257054600369 7 85.94467943977494 3.1568202967273695 9.584124452477576 1.3143758110201065 8 87.06655704590656 2.380816939412706 9.291271733192229 1.2613542814885097 9 82.93023375625337 4.435240212214915 10.504380716048244 2.1301453154834675 10 39.16525436917796 30.597554784441723 18.015728289347287 12.221462557033027 11 33.04175069792003 22.964547487004896 28.08128608335113 15.91241573172394 12 31.45743734282712 20.98734889132411 29.985982567293874 17.569231198554895 13 24.391781877584666 25.291537914150204 31.22426067702268 19.092419531242452 14 19.15510085360369 28.251835092310053 32.80411979431081 19.78894425977544 15 19.581527041516715 24.882553018846256 38.38254282239827 17.153377117238758 16 24.058787352540577 23.291692470835475 35.88081747606786 16.768702700556084 17 22.885820175443303 23.441472925210665 31.635445858471158 22.037261040874874 18 24.017464905435997 24.455160851650266 33.60239434064937 17.92497990226436 19 25.72145236058504 26.278071089635365 29.527249738917266 18.473226810862332 20 27.386049327195426 25.847995646653366 29.762573025350513 17.00338200080069 21 24.920977528101947 25.556967554902503 31.980944448678056 17.541110468317488 22 24.01649892615303 22.601768600736076 32.98126966170332 20.40046281140757 23 22.627957372407554 24.935628213893573 32.06959988064789 20.36681453305098 24 22.396766330684763 23.977269434161535 35.08951944677293 18.53644478838077 25 21.465508636391444 25.317082699633037 32.74524872356571 20.472159940409814 26 19.83316464472892 28.330723400418805 31.222114056393867 20.613997898458404 27 19.29146492904882 27.94223873211999 32.79451366699689 19.971782671834298 28 18.436143939499644 27.577635218316683 34.37791470832256 19.608306133861117 29 20.484020019383983 24.906917162983245 34.488412005190526 20.120650812442243 30 21.33247182292097 26.038132568850177 34.0245809528205 18.604814655408358 31 25.050633414082046 24.9065415043732 31.2993387335153 18.743486348029457 32 25.69247298209611 25.19445699621229 30.56959505075148 18.543474970940125 33 24.923124148730757 26.27302653115766 29.408487952628377 19.395361367483204 34 21.092855295230102 26.374508021384635 32.27739275751666 20.255243925868605 35 20.519868583885103 27.98034124828136 31.83583289417053 19.663957273663005 36 23.64250394709868 28.602592903057538 28.83657455159778 18.918328598245996 37 22.272047672150926 29.28634523884911 29.616119832949984 18.825487256049982 38 21.86504840092863 29.857829315753943 28.025366615970643 20.25175566734679 39 21.8366056775969 28.518391708892484 29.074473782785603 20.57052883072501 40 23.12758332376298 26.370858766315656 28.73648836477954 21.76506954514182 41 19.881731936455736 26.459138539675454 29.714971712906664 23.944157810962146 42 21.17276324813754 26.625233310829593 28.5086245850314 23.693378856001466 43 21.223906484618926 26.428173537104875 28.899094877411862 23.448825100864337 44 20.760290094311777 27.582196787152906 29.022793891147014 22.634719227388302 45 20.713171771509405 29.56256164826118 27.954420804188484 21.76984577604092 46 21.376370214780128 29.122075095229455 28.79267615973863 20.708878530251788 47 20.72691014353379 27.66811527782101 29.47664315759308 22.12833142105212 48 21.077936281859873 25.994985494211097 31.747016465653534 21.18006175827549 49 21.77832492752472 25.322663913267938 31.55795285377113 21.34105830543621 50 20.383504508439977 27.585846042221878 30.61215180471763 21.418497644620516 51 19.451388165895136 28.235306113468216 30.30303843416905 22.010267286467595 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1031.0 1 1786.0 2 2541.0 3 20021.5 4 37502.0 5 26244.5 6 14987.0 7 14505.5 8 14024.0 9 14363.0 10 14702.0 11 14845.0 12 14988.0 13 14525.0 14 14062.0 15 13034.5 16 12007.0 17 11255.0 18 10503.0 19 9973.5 20 9444.0 21 9479.0 22 9514.0 23 10773.5 24 12033.0 25 12678.5 26 16832.5 27 20341.0 28 23200.5 29 26060.0 30 31116.5 31 36173.0 32 41303.5 33 46434.0 34 51040.0 35 55646.0 36 60818.5 37 65991.0 38 71870.0 39 77749.0 40 90772.5 41 103796.0 42 115017.0 43 126238.0 44 130587.5 45 134937.0 46 134983.0 47 135029.0 48 133315.5 49 131602.0 50 128951.5 51 126301.0 52 118612.5 53 110924.0 54 105996.5 55 101069.0 56 94994.0 57 88919.0 58 84776.5 59 80634.0 60 73978.5 61 67323.0 62 59900.5 63 52478.0 64 45167.0 65 37856.0 66 30416.0 67 22976.0 68 18567.0 69 14158.0 70 11235.0 71 8312.0 72 6845.5 73 5379.0 74 4222.5 75 2359.5 76 1653.0 77 1313.5 78 974.0 79 666.5 80 359.0 81 267.0 82 175.0 83 140.5 84 106.0 85 69.5 86 33.0 87 25.5 88 18.0 89 12.5 90 7.0 91 7.5 92 8.0 93 5.5 94 3.0 95 4.0 96 5.0 97 2.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1863394.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.539558600641733 #Duplication Level Percentage of deduplicated Percentage of total 1 78.47126701734986 19.25650255438862 2 5.375714324487894 2.6383531337215973 3 2.171124410091538 1.59835304072175 4 1.2839433511481466 1.2602961242161708 5 0.8789818859963062 1.0784913750154472 6 0.7210408119599838 1.0616413955127793 7 0.6084763377929127 1.0452218523861139 8 0.546633523625643 1.0731316308869394 9 0.5070439404751237 1.1198371041350634 >10 8.2466716242801 48.48456572656124 >50 1.1295720756648435 17.890752609272376 >100 0.05842827771701003 2.102335126629815 >500 6.614516464011702E-4 0.09181749416961381 >1k 2.204838821337234E-4 0.06871432975569212 >5k 0.0 0.0 >10k+ 2.204838821337234E-4 1.2299865026268892 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 22733 1.219978168868205 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.0733103144047904E-4 0.0 0.0 0.017977947766280238 0.0 2 1.0733103144047904E-4 0.0 0.0 0.05602679841193006 0.0 3 1.0733103144047904E-4 0.0 0.0 0.09284134219601436 0.0 4 1.0733103144047904E-4 0.0 0.0 0.13486144100496192 0.0 5 1.0733103144047904E-4 0.0 0.0 0.23607460365333366 0.0 6 1.0733103144047904E-4 0.0 0.0 0.43039743607632097 0.0 7 1.0733103144047904E-4 0.0 0.0 0.5591410082891756 0.0 8 1.0733103144047904E-4 0.0 0.0 0.7996161842315689 0.0 9 1.0733103144047904E-4 0.0 0.0 0.9373755630854237 0.0 10 1.0733103144047904E-4 0.0 0.0 1.1223605957730893 0.0 11 1.0733103144047904E-4 0.0 0.0 1.3003154459014035 0.0 12 1.0733103144047904E-4 0.0 0.0 1.4260000837182045 0.0 13 1.0733103144047904E-4 0.0 0.0 1.4878227578279204 0.0 14 1.0733103144047904E-4 0.0 0.0 1.5260862705364513 0.0 15 1.0733103144047904E-4 0.0 0.0 1.562095831584732 0.0 16 1.0733103144047904E-4 0.0 0.0 1.624830819461692 0.0 17 1.0733103144047904E-4 0.0 0.0 1.6978159208412178 0.0 18 1.0733103144047904E-4 0.0 0.0 1.7939308594961667 0.0 19 1.0733103144047904E-4 0.0 0.0 1.8536605784927933 0.0 20 1.0733103144047904E-4 0.0 0.0 1.9189178456086045 0.0 21 1.0733103144047904E-4 0.0 0.0 2.00306537425794 0.0 22 1.0733103144047904E-4 0.0 0.0 2.099126647397169 0.0 23 1.0733103144047904E-4 0.0 0.0 2.1951879205363976 0.0 24 1.0733103144047904E-4 0.0 0.0 2.279228118154293 0.0 25 1.0733103144047904E-4 0.0 0.0 2.354359840162628 0.0 26 1.0733103144047904E-4 0.0 0.0 2.4256813105548263 0.0 27 1.0733103144047904E-4 0.0 0.0 2.502530329066209 0.0 28 1.0733103144047904E-4 0.0 0.0 2.5778767131374254 0.0 29 1.0733103144047904E-4 0.0 0.0 2.6710937139434816 0.0 30 1.0733103144047904E-4 0.0 0.0 2.7804103694656095 0.0 31 1.0733103144047904E-4 0.0 0.0 2.8778132804978442 0.0 32 1.0733103144047904E-4 0.0 0.0 2.9782214604104125 0.0 33 1.0733103144047904E-4 0.0 0.0 3.0723507749837125 0.0 34 1.0733103144047904E-4 0.0 0.0 3.1805404546757154 0.0 35 1.0733103144047904E-4 0.0 0.0 3.298765585807403 0.0 36 1.0733103144047904E-4 0.0 0.0 3.4086725620024536 0.0 37 1.0733103144047904E-4 0.0 0.0 3.5259317138511768 0.0 38 1.0733103144047904E-4 0.0 0.0 3.6804347336097467 0.0 39 1.0733103144047904E-4 0.0 0.0 3.9060982272133535 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATAGCG 75 0.0 45.0 1 CGTTTTT 12675 0.0 43.189346 1 ACGGGAC 565 0.0 39.82301 5 GGGCGAT 2700 0.0 38.75 7 TACGGGT 175 0.0 38.57143 4 ATAGGGA 2430 0.0 38.425926 4 CGGTCTA 165 0.0 38.181816 31 AGGGCGA 1500 0.0 37.65 6 TATCGCG 30 1.1401941E-4 37.500004 1 GCGTAAG 205 0.0 37.317074 1 CGTTAGG 290 0.0 37.24138 2 CGAGGGA 1210 0.0 37.004135 4 TAGGGAG 2440 0.0 36.885246 5 TAGTACG 110 0.0 36.81818 1 TAGGGAC 1695 0.0 36.637165 5 AAGGGAT 2545 0.0 36.60118 5 GTTTTTT 15595 0.0 36.357807 2 TCGTTAG 130 0.0 36.346153 1 CGAGGGT 415 0.0 36.3253 4 AGGGATT 2710 0.0 36.282288 6 >>END_MODULE