##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548176_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2113321 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.230311911914942 31.0 31.0 33.0 30.0 34.0 2 31.624595127763364 31.0 31.0 34.0 30.0 34.0 3 31.721840647965927 31.0 31.0 34.0 30.0 34.0 4 35.512833592246515 37.0 35.0 37.0 33.0 37.0 5 35.375103924108075 37.0 35.0 37.0 33.0 37.0 6 35.42075908013974 37.0 35.0 37.0 33.0 37.0 7 35.818845315027865 37.0 35.0 37.0 35.0 37.0 8 35.814222259656724 37.0 35.0 37.0 35.0 37.0 9 37.55428967014476 39.0 37.0 39.0 35.0 39.0 10 36.923467376702355 39.0 37.0 39.0 32.0 39.0 11 36.56231779270636 39.0 35.0 39.0 32.0 39.0 12 35.629159980902095 37.0 35.0 39.0 31.0 39.0 13 35.208171877343766 37.0 35.0 39.0 30.0 39.0 14 36.11283425471095 38.0 35.0 40.0 30.0 41.0 15 36.45626812017672 38.0 35.0 40.0 31.0 41.0 16 36.65764689793931 38.0 35.0 40.0 32.0 41.0 17 36.55179359879545 38.0 35.0 40.0 31.0 41.0 18 36.5056803959266 38.0 35.0 40.0 31.0 41.0 19 36.41621457412291 37.0 35.0 40.0 31.0 41.0 20 36.27160710559352 37.0 35.0 40.0 31.0 41.0 21 36.0958160165919 37.0 34.0 40.0 31.0 41.0 22 35.97517698447136 37.0 34.0 40.0 30.0 41.0 23 35.998680749398694 37.0 34.0 40.0 30.0 41.0 24 35.8276248615331 37.0 34.0 40.0 30.0 41.0 25 35.726933106707406 36.0 34.0 40.0 30.0 41.0 26 35.62349023172533 36.0 34.0 40.0 30.0 41.0 27 35.585558464615644 36.0 34.0 40.0 30.0 41.0 28 35.63490023522219 36.0 34.0 40.0 30.0 41.0 29 35.747704205844734 36.0 34.0 40.0 30.0 41.0 30 35.70442824350868 36.0 34.0 40.0 30.0 41.0 31 35.54570744340306 36.0 34.0 40.0 30.0 41.0 32 35.33161124126434 36.0 34.0 40.0 29.0 41.0 33 35.205462397808944 36.0 34.0 40.0 29.0 41.0 34 35.09209438603979 36.0 34.0 40.0 27.0 41.0 35 34.94627271484077 36.0 34.0 40.0 27.0 41.0 36 34.726935945840694 36.0 34.0 40.0 25.0 41.0 37 34.64019900431595 36.0 33.0 40.0 25.0 41.0 38 34.615563371584344 36.0 33.0 40.0 26.0 41.0 39 34.623139125575335 36.0 33.0 40.0 25.0 41.0 40 34.481415743278 36.0 33.0 40.0 24.0 41.0 41 34.47359203831316 36.0 34.0 40.0 24.0 41.0 42 34.40956153845062 36.0 33.0 40.0 24.0 41.0 43 34.306962359244054 35.0 33.0 40.0 24.0 41.0 44 34.18510581213171 35.0 33.0 40.0 24.0 41.0 45 34.10510566071127 35.0 33.0 40.0 23.0 41.0 46 34.00308661107328 35.0 33.0 40.0 23.0 41.0 47 33.97255835720177 35.0 33.0 40.0 23.0 41.0 48 33.887010539335954 35.0 33.0 39.0 23.0 41.0 49 33.83743690617753 35.0 33.0 39.0 24.0 41.0 50 33.67856515881875 35.0 33.0 39.0 24.0 41.0 51 33.291119049117476 35.0 32.0 39.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 6.0 12 1.0 13 4.0 14 30.0 15 77.0 16 188.0 17 497.0 18 1080.0 19 2141.0 20 3759.0 21 5985.0 22 9037.0 23 13306.0 24 18411.0 25 25557.0 26 33829.0 27 41605.0 28 46515.0 29 53782.0 30 64033.0 31 78450.0 32 97199.0 33 127668.0 34 214032.0 35 301142.0 36 150698.0 37 180214.0 38 257403.0 39 386556.0 40 115.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.32689212855028 24.586657682387106 29.55807470800697 13.528375481055646 2 30.393584315870616 27.081404102831513 29.41394137473673 13.111070206561143 3 28.930200381295602 25.386820080811194 31.52725023789571 14.15572929999749 4 25.840844812501274 28.634031460435967 30.947972409302704 14.577151317760057 5 23.51124131166065 33.11233835276326 28.794679085666587 14.581741249909502 6 21.953266919696535 41.283505913204856 26.25393870595144 10.50928846114717 7 88.0789998301252 4.2979746096310025 6.208758631556682 1.4142669286871232 8 89.02182867628723 3.4905724213217018 5.838535650760107 1.649063251630964 9 83.9082183918108 6.328853969652504 7.3596959477523765 2.4032316907843154 10 48.851830838760414 30.073188124284005 12.026805203752765 9.048175833202812 11 45.24920729032646 19.784263725198397 21.699211809280275 13.26731717519487 12 41.36621932967117 20.746635272161683 23.72304065496912 14.164104743198028 13 22.841016580065215 38.772765708569594 24.141008393897568 14.245209317467625 14 16.61863010872461 40.76550604475136 27.13246118313309 15.483402663390939 15 15.20493100669515 25.53464428735625 45.96343858789081 13.296986118057788 16 18.10094159855507 20.99695219041499 44.65828901525135 16.243817195778586 17 18.15389143438219 21.33859456277584 28.359913141448935 32.14760086139304 18 22.16189589749972 25.01328477784492 33.66554347399188 19.159275850663484 19 29.219082193381883 26.30258252295794 26.201414740117567 18.276920543542605 20 32.40785474615546 24.382713274509644 26.18248718486212 17.026944794472776 21 23.388874666934175 28.779300447021537 28.538636581948506 19.293188304095782 22 22.358411239939414 25.64972382330938 27.024337523736335 24.96752741301487 23 20.72340169808562 29.937808785319408 26.247692612717138 23.09109690387783 24 20.69524695964314 24.29157709595466 37.72853248512649 17.28464345927571 25 17.926808090204943 26.3108633283822 34.49215713088547 21.270171450527393 26 17.326331399725834 35.78353690707659 27.870730475871863 19.019401217325715 27 18.727585634174837 35.07484191942445 29.240517649708682 16.95705479669203 28 15.235735602873394 30.263741286818234 37.89589939247279 16.604623717835576 29 16.53894510109917 25.581868537718595 37.17598982833181 20.70319653285043 30 18.535470948332033 31.88427124890161 31.288147896131257 18.2921099066351 31 29.21785190229028 27.274701760877782 25.24746595524296 18.259980381588978 32 29.274303335839658 28.099943170015347 26.66826289049321 15.957490603651788 33 27.580713010470248 29.277757614673778 24.871280794540915 18.27024858031506 34 19.81913774575656 29.3957709216915 27.262730082178717 23.522361250373226 35 20.302121636987472 27.65003518159333 31.138998760718316 20.908844420700877 36 29.07267755348099 26.64526591085784 27.283645030735983 16.998411504925187 37 20.797408439134422 32.91658011253378 28.969096507345547 17.31691494098625 38 19.973491958864745 34.25750276460604 23.730848271511995 22.038157005017222 39 20.033918179017764 32.604701320812126 27.945115768025776 19.416264732144338 40 24.329432206465558 28.081583441417564 25.360226865677294 22.22875748643959 41 17.31029029664684 26.00054605996912 28.198461095119953 28.490702548264085 42 21.252284910810992 26.59752115272597 25.395668712893123 26.75452522356992 43 22.603523080497474 26.297377445262693 26.194932052442578 24.904167421797258 44 18.353056634557646 31.533780244458843 29.115832379463413 20.997330741520102 45 18.30181027870352 37.153087486472714 23.990061140735364 20.555041094088402 46 21.82290338287463 34.533277244677926 24.90435669734981 18.73946267509763 47 21.457223015339363 28.068097558298057 27.114480005640413 23.36019942072217 48 22.203820432390536 24.937243324606154 31.75674684536802 21.102189397635286 49 20.531381650019092 24.59427602337742 32.65897608550713 22.21536624109636 50 18.80367440630174 33.3739644852817 27.997403139418953 19.824957968997612 51 18.539161821606847 33.09710167078262 25.911823144709206 22.45191336290133 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1213.0 1 2234.5 2 3256.0 3 10446.5 4 17637.0 5 12981.5 6 8326.0 7 8421.0 8 8516.0 9 9069.5 10 9623.0 11 10048.0 12 10473.0 13 10486.5 14 10500.0 15 9992.5 16 9485.0 17 9176.0 18 8867.0 19 8792.0 20 8717.0 21 8452.5 22 8188.0 23 9125.5 24 10063.0 25 11435.0 26 16034.0 27 19261.0 28 26786.5 29 34312.0 30 37697.0 31 41082.0 32 45374.0 33 49666.0 34 56502.5 35 63339.0 36 68302.5 37 73266.0 38 83992.5 39 94719.0 40 127967.0 41 161215.0 42 185911.0 43 210607.0 44 211685.0 45 212763.0 46 205107.0 47 197451.0 48 182090.0 49 166729.0 50 154690.0 51 142651.0 52 129107.0 53 115563.0 54 101534.5 55 87506.0 56 82255.5 57 77005.0 58 72464.0 59 67923.0 60 65828.0 61 63733.0 62 52230.0 63 40727.0 64 33458.0 65 26189.0 66 19777.0 67 13365.0 68 12128.0 69 10891.0 70 8634.0 71 6377.0 72 5052.5 73 3728.0 74 3090.0 75 2070.5 76 1689.0 77 1227.5 78 766.0 79 570.0 80 374.0 81 283.5 82 193.0 83 118.0 84 43.0 85 32.0 86 21.0 87 19.5 88 18.0 89 14.0 90 10.0 91 9.5 92 9.0 93 7.5 94 6.0 95 3.0 96 0.0 97 0.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2113321.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.808657491745596 #Duplication Level Percentage of deduplicated Percentage of total 1 82.54520817789685 14.700193400250026 2 7.664695180863311 2.729958625092555 3 2.244122976227405 1.198944523589718 4 1.0277869055869067 0.7321401990439315 5 0.5593660033857711 0.4980778783411902 6 0.35638363215931695 0.3808028424473716 7 0.25947684044824937 0.3234653925008234 8 0.2012402592657792 0.2867055080651476 9 0.1572753241306202 0.25207761414109375 >10 2.0427657403196986 9.355591094000697 >50 1.2532845702211142 16.494751585640646 >100 1.6774498566936624 50.69841904029872 >500 0.008809014205936796 1.032914334350665 >1k 0.001601638946533963 0.4983450371409252 >5k 2.6693982442232717E-4 0.33219833249458985 >10k+ 2.6693982442232717E-4 0.48541459260192565 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10211 0.48317316678346545 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 6988 0.33066439031268796 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 3009 0.14238253440911247 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 2402 0.11365996930896916 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.029810899527331628 0.0 2 0.0 0.0 0.0 0.10722460052211662 0.0 3 0.0 0.0 0.0 0.15932269636273902 0.0 4 0.0 0.0 0.0 0.2907745676118299 0.0 5 0.0 0.0 0.0 0.49145397220772424 0.0 6 0.0 0.0 0.0 0.7420548037898644 0.0 7 0.0 0.0 0.0 0.8646107240688944 0.0 8 0.0 0.0 0.0 1.1837293056757587 0.0 9 0.0 0.0 0.0 1.287972816245142 0.0 10 0.0 0.0 0.0 1.4846774342373923 0.0 11 0.0 0.0 0.0 1.7449313189998112 0.0 12 0.0 0.0 0.0 1.9536076156911326 0.0 13 0.0 0.0 0.0 2.0327721155470466 0.0 14 0.0 0.0 0.0 2.0625356961862398 0.0 15 0.0 0.0 0.0 2.1175675630914563 0.0 16 0.0 0.0 0.0 2.242915297770665 0.0 17 0.0 0.0 0.0 2.385723702173025 0.0 18 0.0 0.0 0.0 2.575472443608898 0.0 19 0.0 0.0 0.0 2.664384634421368 0.0 20 0.0 0.0 0.0 2.767350535011009 0.0 21 0.0 0.0 0.0 2.891089427493504 0.0 22 0.0 0.0 0.0 3.0271312308920413 0.0 23 0.0 0.0 0.0 3.1741983352268774 0.0 24 0.0 0.0 0.0 3.2844513445898658 0.0 25 0.0 0.0 0.0 3.3740733187244154 0.0 26 0.0 0.0 0.0 3.4654460917200938 0.0 27 0.0 0.0 0.0 3.5519923381256326 0.0 28 0.0 0.0 0.0 3.6451632288705786 0.0 29 0.0 0.0 0.0 3.745668547277011 0.0 30 0.0 0.0 0.0 3.8739027341326757 0.0 31 0.0 0.0 0.0 3.999155831035607 0.0 32 0.0 0.0 0.0 4.109882029279982 0.0 33 0.0 0.0 0.0 4.218526196446257 0.0 34 0.0 0.0 0.0 4.3385742156539395 0.0 35 0.0 0.0 0.0 4.486114508870163 0.0 36 0.0 0.0 0.0 4.623244646695888 0.0 37 0.0 0.0 0.0 4.758671304548622 0.0 38 0.0 0.0 0.0 4.8994923156491605 0.0 39 0.0 0.0 0.0 5.041922168946412 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GACGTAG 130 0.0 45.000004 1 CGCAAAC 35 1.2125747E-7 45.000004 29 TCGACGA 35 1.2125747E-7 45.000004 2 ATGTTCG 35 1.2125747E-7 45.000004 1 AACCGAT 25 3.8919206E-5 45.0 26 GGCGTAT 20 7.034631E-4 45.0 8 GACCGAA 20 7.034631E-4 45.0 9 CACGCTA 20 7.034631E-4 45.0 41 TCGATTG 75 0.0 45.0 1 TTATCCG 40 6.8193913E-9 45.0 1 CGTTAGA 40 6.8193913E-9 45.0 34 GCTAGCG 45 3.8562575E-10 45.0 1 ACGTAAT 25 3.8919206E-5 45.0 29 CCGCGAA 20 7.034631E-4 45.0 35 TATCGCT 25 3.8919206E-5 45.0 38 TAATGCG 90 0.0 45.0 1 CTATACG 60 0.0 44.999996 1 TACGACT 30 2.166371E-6 44.999996 15 TTGTGCG 140 0.0 43.39286 1 AACGGGA 405 0.0 42.777775 4 >>END_MODULE