##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548174_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2672622 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.09251476639794 31.0 31.0 33.0 30.0 34.0 2 31.47332207846826 31.0 31.0 34.0 30.0 34.0 3 31.46364094885098 31.0 31.0 34.0 30.0 34.0 4 35.343553259682814 37.0 35.0 37.0 33.0 37.0 5 35.21766751901316 37.0 35.0 37.0 32.0 37.0 6 35.27758208979796 37.0 35.0 37.0 32.0 37.0 7 35.74259472532966 37.0 35.0 37.0 35.0 37.0 8 35.74857349823507 37.0 35.0 37.0 35.0 37.0 9 37.47748091574491 39.0 37.0 39.0 35.0 39.0 10 36.77779648599765 39.0 37.0 39.0 32.0 39.0 11 36.432801945056205 39.0 35.0 39.0 32.0 39.0 12 36.0741410495012 38.0 35.0 39.0 31.0 39.0 13 35.90982301275676 38.0 35.0 39.0 31.0 39.0 14 36.87587807029951 39.0 35.0 41.0 31.0 41.0 15 37.0726821825159 39.0 35.0 41.0 31.0 41.0 16 37.135963484548135 39.0 35.0 41.0 32.0 41.0 17 37.00194565486627 39.0 35.0 41.0 31.0 41.0 18 36.854947688075605 38.0 35.0 40.0 31.0 41.0 19 36.73472268057361 38.0 35.0 40.0 31.0 41.0 20 36.5491865291837 38.0 35.0 40.0 31.0 41.0 21 36.40103052358321 38.0 35.0 40.0 30.0 41.0 22 36.34908004199621 38.0 35.0 40.0 30.0 41.0 23 36.269255809463516 38.0 35.0 40.0 30.0 41.0 24 36.082433280875485 38.0 34.0 40.0 30.0 41.0 25 35.96291881156407 38.0 34.0 40.0 30.0 41.0 26 35.89296353917614 38.0 34.0 40.0 30.0 41.0 27 35.85399431719113 38.0 34.0 40.0 30.0 41.0 28 35.82883887059225 38.0 34.0 40.0 30.0 41.0 29 35.834142650924825 38.0 34.0 40.0 30.0 41.0 30 35.71527735684283 38.0 34.0 40.0 29.0 41.0 31 35.57871259010814 38.0 34.0 40.0 29.0 41.0 32 35.35992594538247 38.0 34.0 40.0 27.0 41.0 33 35.13948960982885 38.0 34.0 40.0 26.0 41.0 34 34.85247408724466 38.0 34.0 40.0 24.0 41.0 35 34.61292244095873 38.0 33.0 40.0 23.0 41.0 36 34.41998382113146 37.0 33.0 40.0 23.0 41.0 37 34.33195191837828 37.0 33.0 40.0 23.0 41.0 38 34.22208901969676 37.0 33.0 40.0 22.0 41.0 39 34.17470745956592 37.0 33.0 40.0 22.0 41.0 40 34.05124480753358 37.0 33.0 40.0 21.0 41.0 41 33.96885717471457 37.0 33.0 40.0 21.0 41.0 42 33.92126159254844 37.0 33.0 40.0 21.0 41.0 43 33.82380823026975 37.0 33.0 40.0 21.0 41.0 44 33.67644358236967 37.0 33.0 40.0 20.0 41.0 45 33.59915169447831 36.0 33.0 40.0 20.0 41.0 46 33.50329676250514 36.0 32.0 40.0 20.0 41.0 47 33.465333668584634 36.0 32.0 40.0 20.0 41.0 48 33.33800477583437 36.0 32.0 40.0 20.0 41.0 49 33.240020848440224 36.0 32.0 40.0 19.0 41.0 50 33.10663685324749 36.0 32.0 40.0 18.0 41.0 51 32.77724833515551 35.0 31.0 39.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 3.0 12 11.0 13 18.0 14 41.0 15 104.0 16 312.0 17 815.0 18 1852.0 19 3575.0 20 5938.0 21 9295.0 22 13951.0 23 20230.0 24 28595.0 25 41316.0 26 56106.0 27 66788.0 28 70415.0 29 74100.0 30 83141.0 31 96830.0 32 116300.0 33 144694.0 34 206676.0 35 262401.0 36 219608.0 37 260222.0 38 367938.0 39 521281.0 40 65.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.718119509605174 23.62425363556837 28.65104006477534 18.00658679005112 2 33.56288319111344 24.921631266973034 28.980491816650467 12.534993725263055 3 26.588795572288188 24.935138601717714 35.44500494271169 13.031060883282407 4 24.357017191357404 26.975494476959334 34.8877244892843 13.779763842398962 5 22.378622940318536 31.440098899133513 33.3105093050944 12.870768855453557 6 20.925480670293066 39.426338629256215 29.52280569418346 10.125375006267253 7 85.10500175483102 3.015091546803102 10.449326541501193 1.4305801568646819 8 86.1294638748016 2.339949308207446 10.026633021804056 1.5039537951868989 9 81.36582726625763 5.0802545215896595 11.433416322996667 2.120501889156042 10 39.1464262435915 35.61401500099902 16.233945541120292 9.00561321428919 11 28.215924287085866 23.282791206537997 31.970888513227834 16.5303959931483 12 28.77219449664038 22.340757503305742 31.44720802268334 17.439839977370536 13 23.014627582950375 27.310670944114058 31.920900149740593 17.753801323194978 14 17.340798661389453 31.005357285841395 33.048519394063206 18.605324658705946 15 16.951069025099695 26.91319610479896 39.84652524749104 16.289209622610308 16 21.107549066048247 25.500164258170443 37.38111861684892 16.01116805893239 17 20.99687123730928 24.61799685851572 32.410082682848525 21.975049221326472 18 21.312142158524473 25.945345058148888 34.560929304630434 18.1815834786962 19 23.951984231215636 27.28556451305123 30.620753701795465 18.141697553937668 20 25.14392233544437 27.219112916080164 30.95622950046808 16.680735248007387 21 23.039434682495315 26.351088930645634 33.440082435900024 17.169393950959023 22 22.38023184722718 23.87150146934359 33.330976097629964 20.417290585799265 23 19.69081299188587 27.102186541905287 32.86678774626565 20.34021271994319 24 19.6542197138241 26.897780531627742 35.69943673291621 17.74856302163194 25 19.752886865407827 28.056006423654374 33.48176434976588 18.709342361171913 26 19.000853843154776 30.942198335567095 30.779287156956727 19.277660664321406 27 17.98989905792888 30.456345865595658 33.31140729964806 18.2423477768274 28 16.951742521014943 28.587394700784476 36.08800645957416 18.372856318626425 29 18.006437124292173 26.69228944459785 35.573006583048404 19.728266848061565 30 19.5772166808475 27.774522547520746 33.88866813189445 18.759592639737306 31 22.92486554402381 27.498950468865406 31.043297555733655 18.532886431377126 32 23.009389281387342 27.648092397652942 31.190755744733075 18.15176257622664 33 21.92479894276108 28.82689733153435 30.496082124595247 18.752221601109323 34 19.270776039409988 28.746002988825207 31.612064856159982 20.371156115604823 35 18.58343604146041 29.610098248087457 31.65116503568406 20.15530067476807 36 22.29226579740794 28.490860286265697 30.327745562223164 18.8891283541032 37 19.565580168089614 30.424092894543257 30.712498812028038 19.297828125339088 38 19.224753818534758 30.528784092924475 29.40868555298879 20.837776535551978 39 19.155683070782175 29.98860295245643 29.919719286902524 20.935994689858873 40 21.3124789064821 28.4035677323617 29.270581473923365 21.013371887232836 41 18.736843444377843 27.811265491341462 30.332946447346465 23.118944616934233 42 20.214343816671416 28.416326738311664 28.784953502590337 22.584375942426576 43 20.175580385104965 28.996169304899833 28.989284679988415 21.838965630006786 44 19.466613684988 30.085474114932826 29.898990579288803 20.54892162079037 45 18.531389773787687 31.399951059296825 28.920139099356362 21.148520067559122 46 20.65076916975165 30.702433789739064 28.90756717560508 19.739229864904203 47 19.423846694369796 28.696463622614793 30.588351064984128 21.291338618031283 48 19.787459655723854 28.138135508874807 31.55448095540634 20.519923879995 49 20.205139372496372 26.95016354725809 31.195058635302708 21.64963844494283 50 18.637427963999396 29.580950841533145 31.307794368227153 20.4738268262403 51 18.685246173981955 30.00996773954566 30.034961921289284 21.269824165183103 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1671.0 1 2547.5 2 3424.0 3 33636.0 4 63848.0 5 43479.5 6 23111.0 7 23037.5 8 22964.0 9 24237.5 10 25511.0 11 26256.0 12 27001.0 13 26139.5 14 25278.0 15 23926.0 16 22574.0 17 20683.5 18 18793.0 19 18080.0 20 17367.0 21 17230.0 22 17093.0 23 18312.5 24 19532.0 25 22011.0 26 29479.0 27 34468.0 28 38672.5 29 42877.0 30 51939.5 31 61002.0 32 68060.5 33 75119.0 34 83990.0 35 92861.0 36 97801.0 37 102741.0 38 113930.0 39 125119.0 40 143768.0 41 162417.0 42 175929.5 43 189442.0 44 201996.0 45 214550.0 46 214122.0 47 213694.0 48 210139.0 49 206584.0 50 196030.5 51 185477.0 52 170726.0 53 155975.0 54 142213.0 55 128451.0 56 114345.5 57 100240.0 58 91861.5 59 83483.0 60 73662.0 61 63841.0 62 55310.0 63 46779.0 64 39005.5 65 31232.0 66 24973.0 67 18714.0 68 15028.5 69 11343.0 70 8970.0 71 6597.0 72 5018.0 73 3439.0 74 2490.0 75 1258.0 76 975.0 77 723.5 78 472.0 79 377.5 80 283.0 81 192.5 82 102.0 83 79.0 84 56.0 85 48.5 86 41.0 87 29.0 88 17.0 89 10.5 90 4.0 91 6.5 92 9.0 93 7.5 94 6.0 95 10.0 96 14.0 97 7.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2672622.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.605240786255596 #Duplication Level Percentage of deduplicated Percentage of total 1 80.59008816364386 19.82938524252024 2 6.436244658635055 3.1673069916993395 3 2.3332086309585005 1.72227480507911 4 1.3045513062669676 1.28395196034892 5 0.8946274447012524 1.100626184543344 6 0.6318539248696369 0.9328150777894841 7 0.4715126896397708 0.8121178283653095 8 0.3826463121214585 0.7532083716576959 9 0.32600386070665915 0.7219263140942649 >10 4.702864469941576 28.789997462223702 >50 1.5318702967463969 26.342033873855996 >100 0.3922220924133621 12.385876295571098 >500 0.0012299463228578218 0.19871524734217214 >1k 9.224597421433663E-4 0.30569539573045745 >5k 0.0 0.0 >10k+ 1.5374329035722773E-4 1.6540689491788458 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 43725 1.6360338274548365 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.12249319207879E-4 0.0 0.0 0.03023248330665541 0.0 2 1.12249319207879E-4 0.0 0.0 0.09316693494253957 0.0 3 1.12249319207879E-4 0.0 0.0 0.16901005828732982 0.0 4 1.12249319207879E-4 0.0 0.0 0.258846930093369 0.0 5 1.12249319207879E-4 0.0 0.0 0.46748099806108007 0.0 6 1.12249319207879E-4 0.0 0.0 0.862710850992022 0.0 7 1.12249319207879E-4 0.0 0.0 1.1318847184525158 0.0 8 1.12249319207879E-4 0.0 0.0 1.6112267279098953 0.0 9 1.12249319207879E-4 0.0 0.0 1.8732540553808208 0.0 10 1.12249319207879E-4 0.0 0.0 2.175391806248695 0.0 11 1.12249319207879E-4 0.0 0.0 2.442582602403183 0.0 12 1.12249319207879E-4 0.0 0.0 2.6575400486862715 0.0 13 1.12249319207879E-4 0.0 0.0 2.7655987266437227 0.0 14 1.12249319207879E-4 0.0 0.0 2.8380743704122766 0.0 15 1.12249319207879E-4 0.0 0.0 2.898913501422947 0.0 16 1.12249319207879E-4 0.0 0.0 3.004914275194921 0.0 17 1.12249319207879E-4 0.0 0.0 3.129174271558043 0.0 18 1.12249319207879E-4 0.0 0.0 3.294068521474417 0.0 19 1.12249319207879E-4 0.0 0.0 3.397263062266194 0.0 20 1.12249319207879E-4 0.0 0.0 3.5062945676567807 0.0 21 1.12249319207879E-4 0.0 0.0 3.6345581230716504 0.0 22 1.12249319207879E-4 0.0 0.0 3.7820163120710673 0.0 23 1.12249319207879E-4 0.0 0.0 3.9369203725779403 0.0 24 1.12249319207879E-4 0.0 0.0 4.064248516999411 0.0 25 1.12249319207879E-4 0.0 0.0 4.17455218134102 0.0 26 1.12249319207879E-4 0.0 0.0 4.283022440135567 0.0 27 1.12249319207879E-4 0.0 0.0 4.394373764789783 0.0 28 1.12249319207879E-4 0.0 0.0 4.515191448697197 0.0 29 1.12249319207879E-4 0.0 0.0 4.649740965987708 0.0 30 1.12249319207879E-4 0.0 0.0 4.819985766786324 0.0 31 1.4966575894383868E-4 0.0 0.0 4.95801501297228 0.0 32 1.4966575894383868E-4 0.0 0.0 5.098139579783449 0.0 33 1.4966575894383868E-4 0.0 0.0 5.234896667018381 0.0 34 1.4966575894383868E-4 0.0 0.0 5.385722335594035 0.0 35 1.4966575894383868E-4 0.0 0.0 5.555630388435027 0.0 36 1.4966575894383868E-4 0.0 0.0 5.705408396698074 0.0 37 1.4966575894383868E-4 0.0 0.0 5.868693739705802 0.0 38 1.8708219867979834E-4 0.0 0.0 6.051922045092796 0.0 39 1.8708219867979834E-4 0.0 0.0 6.323565397575864 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 20650 0.0 43.53995 1 CGCCGGT 605 0.0 40.909092 28 CATACGA 410 0.0 40.609756 18 CGTAAGG 380 0.0 39.67105 2 CGGTCTA 205 0.0 39.512196 31 ACGCCGG 640 0.0 38.671875 27 TAAGGGA 3440 0.0 38.65552 4 AAGGGAT 4825 0.0 38.518135 5 TCGTCCC 635 0.0 38.267715 38 CTCGTCC 655 0.0 37.78626 37 CACGCCG 655 0.0 37.78626 26 GTTTTTT 24550 0.0 37.576378 2 GCGTTAG 180 0.0 37.5 1 CGGGCGA 390 0.0 37.5 6 AGGGATG 5510 0.0 37.486385 6 GGGCGAT 3465 0.0 37.467533 7 TTAGGGA 4050 0.0 37.38889 4 TAGGGAT 4735 0.0 37.349525 5 ATAGGGA 4170 0.0 37.338127 4 AGGGCGA 1900 0.0 37.30263 6 >>END_MODULE