##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548172_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2213491 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.095884284146628 31.0 31.0 33.0 30.0 34.0 2 31.472511973168178 31.0 31.0 34.0 30.0 34.0 3 31.593157144076937 31.0 31.0 34.0 30.0 34.0 4 35.40053291384514 37.0 35.0 37.0 33.0 37.0 5 35.23835018981329 37.0 35.0 37.0 33.0 37.0 6 35.27888028458214 37.0 35.0 37.0 32.0 37.0 7 35.7305455499932 37.0 35.0 37.0 35.0 37.0 8 35.72635081868415 37.0 35.0 37.0 35.0 37.0 9 37.44905355386582 39.0 37.0 39.0 35.0 39.0 10 36.698095903710474 39.0 37.0 39.0 32.0 39.0 11 36.41968004387639 38.0 35.0 39.0 32.0 39.0 12 35.807527566183914 37.0 35.0 39.0 31.0 39.0 13 35.52112929304885 37.0 35.0 39.0 30.0 39.0 14 36.44312626525249 38.0 35.0 40.0 30.0 41.0 15 36.706916359723174 38.0 35.0 40.0 31.0 41.0 16 36.81508214851563 38.0 35.0 40.0 31.0 41.0 17 36.68487832116779 38.0 35.0 40.0 31.0 41.0 18 36.62589457106444 38.0 35.0 40.0 31.0 41.0 19 36.56318683925076 38.0 35.0 40.0 31.0 41.0 20 36.45968427249083 38.0 35.0 40.0 31.0 41.0 21 36.30015346798338 38.0 35.0 40.0 30.0 41.0 22 36.22970502251873 38.0 34.0 40.0 30.0 41.0 23 36.18115637244516 38.0 34.0 40.0 30.0 41.0 24 35.99863021805826 38.0 34.0 40.0 30.0 41.0 25 35.89569146655668 38.0 34.0 40.0 30.0 41.0 26 35.833562910352924 38.0 34.0 40.0 30.0 41.0 27 35.83249717301764 38.0 34.0 40.0 30.0 41.0 28 35.85365018425645 38.0 34.0 40.0 30.0 41.0 29 35.90049699772893 38.0 34.0 40.0 30.0 41.0 30 35.82326108396194 38.0 34.0 40.0 30.0 41.0 31 35.709357752075796 38.0 34.0 40.0 29.0 41.0 32 35.575822987308285 38.0 34.0 40.0 29.0 41.0 33 35.47373312111954 38.0 34.0 40.0 28.0 41.0 34 35.34434474773107 38.0 34.0 40.0 27.0 41.0 35 35.20243678424715 38.0 34.0 40.0 27.0 41.0 36 35.027485542069066 37.0 34.0 40.0 26.0 41.0 37 34.955872872308944 37.0 34.0 40.0 26.0 41.0 38 34.88003429876155 37.0 33.0 40.0 26.0 41.0 39 34.85623975882441 37.0 34.0 40.0 25.0 41.0 40 34.715069543991824 37.0 33.0 40.0 24.0 41.0 41 34.672886404326924 37.0 33.0 40.0 24.0 41.0 42 34.6223522029229 37.0 33.0 40.0 24.0 41.0 43 34.53044760516307 37.0 33.0 40.0 24.0 41.0 44 34.39025774218192 36.0 33.0 40.0 24.0 41.0 45 34.29290880333374 36.0 33.0 40.0 24.0 41.0 46 34.18007301588305 36.0 33.0 40.0 23.0 41.0 47 34.154201214280974 36.0 33.0 40.0 23.0 41.0 48 34.05614795813491 36.0 33.0 40.0 23.0 41.0 49 33.938736593010766 36.0 33.0 40.0 24.0 41.0 50 33.78281140515141 35.0 32.0 40.0 23.0 41.0 51 33.42300962597092 35.0 32.0 39.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 1.0 11 4.0 12 4.0 13 8.0 14 34.0 15 90.0 16 247.0 17 565.0 18 1294.0 19 2357.0 20 4076.0 21 6563.0 22 9652.0 23 13874.0 24 19186.0 25 26578.0 26 35083.0 27 42691.0 28 49465.0 29 56897.0 30 67799.0 31 82733.0 32 101306.0 33 127756.0 34 194598.0 35 250792.0 36 174179.0 37 215823.0 38 304165.0 39 425612.0 40 58.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.48199744204969 23.77624304774675 29.79709427325433 12.944665236949234 2 30.39090739469914 25.880701570505593 30.414535229644034 13.313855805151228 3 29.06725168523387 25.56942856329662 31.304441716727105 14.058878034742406 4 26.13455396927297 28.357693796812367 30.389145472016825 15.118606761897835 5 23.221463290340914 32.28208291788853 29.883699549715807 14.612754242054745 6 21.63270598344425 41.095039464809204 27.039820807945457 10.232433743801082 7 88.66663564478013 3.8101803892584156 5.988820374693189 1.5343635912682725 8 89.49943776595433 2.814739251255144 5.781862225778194 1.9039607570123394 9 84.62401699397016 5.262863052074755 7.350063768047849 2.7630561859072387 10 43.027145807233914 30.42203469542004 14.091857613154968 12.45896188419108 11 37.12596979160973 23.901158848172415 24.048347158402724 14.924524201815142 12 34.59625541734753 22.276124005021934 26.375304891684674 16.752315685945867 13 23.750085272540073 30.98837989402261 27.189810123465602 18.071724709971715 14 18.503350589634202 34.57357631000081 28.167586857141053 18.75548624322394 15 17.57743763132536 26.308668072289425 39.842764212730025 16.271130083655187 16 20.851632105122633 23.788757216541654 37.935957272923176 17.423653405412537 17 21.427374224697548 23.574435134364677 28.522682043884522 26.475508597053256 18 23.297768095736554 25.191066961645653 32.05637610453352 19.454788838084276 19 27.404764690708028 26.065613097139316 27.047817226272887 19.481804985879773 20 29.232239932306026 26.604354840385618 26.185514194546084 17.977891032762276 21 24.199240024016362 27.248179459505366 29.340711121030083 19.211869395448186 22 24.2408485058218 23.97999359382984 28.727516850079805 23.051641050268557 23 21.514115033673054 27.989948908759963 28.15805440365468 22.3378816539123 24 21.380344442331143 25.335770509118856 34.46560207382817 18.818282974721832 25 20.361998309457775 26.901125868594 32.111221595208654 20.62565422673957 26 19.305115765096854 32.02877264917725 28.122002754924235 20.54410883080166 27 19.852983364287454 30.80699221275352 30.40062055820421 18.939403864754816 28 17.976174287584634 28.685863190769695 34.71403317203458 18.62392934961109 29 19.094317528284506 26.486938505735964 34.054441603783346 20.364302362196188 30 20.606860384794878 28.5009064866313 31.50164152463236 19.390591603941466 31 26.593873659301074 26.836476859404446 27.19979435199872 19.36985512929576 32 26.772324802766306 27.151996552052843 28.454373656816312 17.621304988364532 33 25.34173393973592 27.58321583417326 27.52326528546988 19.551784940620948 34 20.74632334172581 27.74946905137631 29.754717773869423 21.74948983302846 35 21.03279389886835 27.001419928971927 30.379567841025786 21.586218331133942 36 25.794728779109562 26.49597400667091 28.683197717993885 19.026099496225648 37 21.269027070812577 30.01105493539391 29.708456009082486 19.01146198471103 38 21.28551686001886 30.40405404855949 27.31151832105936 20.998910770362293 39 21.133946331835098 28.962846471930536 29.375362267115612 20.527844929118753 40 22.906711615271984 26.50595823520403 28.728194512649928 21.85913563687406 41 18.991990480196215 25.75357207235087 29.400119539677373 25.85431790777555 42 22.108199220145913 25.72709805461147 28.12430680766265 24.040395917579968 43 21.537788046122618 26.132837224095333 28.9689906125663 23.360384117215744 44 20.28876557438002 29.233459724932242 29.070956240617196 21.40681846007054 45 19.745686790684942 31.634689275899476 26.786510539234175 21.833113394181407 46 21.700201175428315 29.66580844466953 28.26254997196736 20.371440407934795 47 21.092111962506284 27.85057630683838 29.02505589586766 22.032255834787673 48 21.783553671553214 25.940832829227677 30.715101168245095 21.560512330974014 49 20.997103670175303 25.256122568377283 31.131411873822845 22.615361887624573 50 20.068886659128047 29.705474293773953 29.217828308314786 21.007810738783217 51 19.41453568141908 30.935657746067186 26.96929872314818 22.68050784936555 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 975.0 1 1983.0 2 2991.0 3 9502.5 4 16014.0 5 11914.0 6 7814.0 7 7938.0 8 8062.0 9 8714.5 10 9367.0 11 9526.0 12 9685.0 13 9543.5 14 9402.0 15 8776.0 16 8150.0 17 8194.0 18 8238.0 19 7776.0 20 7314.0 21 8422.0 22 9530.0 23 11293.0 24 13056.0 25 14642.5 26 18242.5 27 20256.0 28 26266.0 29 32276.0 30 38010.0 31 43744.0 32 48277.5 33 52811.0 34 61192.0 35 69573.0 36 77669.0 37 85765.0 38 95257.0 39 104749.0 40 122094.5 41 139440.0 42 164357.0 43 189274.0 44 192031.5 45 194789.0 46 195525.0 47 196261.0 48 189273.0 49 182285.0 50 175764.5 51 169244.0 52 153350.0 53 137456.0 54 123575.0 55 109694.0 56 101854.5 57 94015.0 58 85345.0 59 76675.0 60 68731.5 61 60788.0 62 52916.5 63 45045.0 64 37273.0 65 29501.0 66 25252.5 67 21004.0 68 17278.0 69 13552.0 70 11027.5 71 8503.0 72 6736.0 73 4969.0 74 3714.5 75 1863.5 76 1267.0 77 893.5 78 520.0 79 386.5 80 253.0 81 263.5 82 274.0 83 203.5 84 133.0 85 84.5 86 36.0 87 28.5 88 21.0 89 17.0 90 13.0 91 12.5 92 12.0 93 8.5 94 5.0 95 3.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2213491.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.08038312891812 #Duplication Level Percentage of deduplicated Percentage of total 1 81.5182027250179 17.18434945424194 2 7.246800883038802 3.0553067814688015 3 2.2123548309594665 1.3991186236121531 4 1.0154444877757263 0.856238353938413 5 0.5999480784946599 0.6323567676062836 6 0.4186690335445669 0.5295422178800006 7 0.3219957216699112 0.4751455225071947 8 0.24818919493733205 0.4185538654189363 9 0.20582474567372946 0.39049780465929146 >10 3.3881044446394455 18.73300439249164 >50 1.833644030011065 27.745291390109646 >100 0.9888807280149005 27.806360895438214 >500 0.0015097415064501856 0.19463829097518462 >1k 2.1567735806431225E-4 0.1631306208874007 >5k 2.1567735806431225E-4 0.416465018764936 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9160 0.4138259428206394 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3588 0.16209688677297537 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.5177504674742295E-5 0.0 0.0 0.03980138161844796 0.0 2 4.5177504674742295E-5 0.0 0.0 0.1397340219589779 0.0 3 4.5177504674742295E-5 0.0 0.0 0.20795205401783878 0.0 4 4.5177504674742295E-5 0.0 0.0 0.33395211455569507 0.0 5 4.5177504674742295E-5 0.0 0.0 0.562911708247289 0.0 6 4.5177504674742295E-5 0.0 0.0 0.8632969368296506 0.0 7 4.5177504674742295E-5 0.0 0.0 1.0275623438270136 0.0 8 4.5177504674742295E-5 0.0 0.0 1.449972012535854 0.0 9 4.5177504674742295E-5 0.0 0.0 1.5913324246631226 0.0 10 4.5177504674742295E-5 0.0 0.0 1.844733048383752 0.0 11 4.5177504674742295E-5 0.0 0.0 2.16327963384536 0.0 12 4.5177504674742295E-5 0.0 0.0 2.413834074771481 0.0 13 4.5177504674742295E-5 0.0 0.0 2.5231184585796824 0.0 14 4.5177504674742295E-5 0.0 0.0 2.567211703142231 0.0 15 4.5177504674742295E-5 0.0 0.0 2.6399926631732407 0.0 16 4.5177504674742295E-5 0.0 0.0 2.798972302123659 0.0 17 4.5177504674742295E-5 0.0 0.0 2.9857361064490435 0.0 18 4.5177504674742295E-5 0.0 0.0 3.2026333063924812 0.0 19 4.5177504674742295E-5 0.0 0.0 3.321088723649656 0.0 20 4.5177504674742295E-5 0.0 0.0 3.451154759608239 0.0 21 4.5177504674742295E-5 0.0 0.0 3.629018595512699 0.0 22 4.5177504674742295E-5 0.0 0.0 3.8161889973801566 0.0 23 4.5177504674742295E-5 0.0 0.0 4.019849188453895 0.0 24 4.5177504674742295E-5 0.0 0.0 4.1762988871425275 0.0 25 4.5177504674742295E-5 0.0 0.0 4.305190307979567 0.0 26 4.5177504674742295E-5 0.0 0.0 4.436656846583067 0.0 27 4.5177504674742295E-5 0.0 0.0 4.569523887831484 0.0 28 4.5177504674742295E-5 0.0 0.0 4.705282289379085 0.0 29 4.5177504674742295E-5 0.0 0.0 4.861641633058368 0.0 30 4.5177504674742295E-5 0.0 0.0 5.048766857421151 0.0 31 4.5177504674742295E-5 0.0 0.0 5.221344925278666 0.0 32 4.5177504674742295E-5 0.0 0.0 5.380595629257133 0.0 33 4.5177504674742295E-5 0.0 0.0 5.541969675955312 0.0 34 4.5177504674742295E-5 0.0 0.0 5.716490376513842 0.0 35 4.5177504674742295E-5 0.0 0.0 5.916084592166853 0.0 36 4.5177504674742295E-5 0.0 0.0 6.092683457940421 0.0 37 4.5177504674742295E-5 0.0 0.0 6.277323919546093 0.0 38 4.5177504674742295E-5 0.0 0.0 6.478544525367394 0.0 39 4.5177504674742295E-5 0.0 0.0 6.745859820527845 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAACTA 40 6.8193913E-9 45.000004 33 CGCGAAA 20 7.034703E-4 45.000004 42 TACGTTG 75 0.0 42.000004 1 CGTTTTT 6185 0.0 41.180275 1 TAGTGCG 145 0.0 40.344826 1 TAGGGCG 670 0.0 39.96269 5 ACGGGAT 905 0.0 39.530384 5 GCGATAA 195 0.0 39.23077 9 ACGGGTA 230 0.0 39.130436 5 GCGAACC 110 0.0 38.863636 9 AGGGCGA 1735 0.0 38.775215 6 CGTCATA 530 0.0 38.632076 38 TTGTACG 175 0.0 38.571426 1 CGTTCCG 35 6.2509116E-6 38.571426 21 TAGGGAC 1935 0.0 37.558136 5 TCGCATA 30 1.14026356E-4 37.499996 34 CCCGTAA 30 1.14026356E-4 37.499996 40 ATACGCG 60 1.5643309E-10 37.499996 1 TACGGGA 955 0.0 37.460735 4 TATGGGA 2075 0.0 37.409637 4 >>END_MODULE