##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548170_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1327214 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.16606590949161 31.0 31.0 33.0 30.0 34.0 2 31.552392455173017 31.0 31.0 34.0 30.0 34.0 3 31.656703440439898 31.0 31.0 34.0 30.0 34.0 4 35.47118173858926 37.0 35.0 37.0 33.0 37.0 5 35.3061548476734 37.0 35.0 37.0 33.0 37.0 6 35.35892478530214 37.0 35.0 37.0 33.0 37.0 7 35.786323079774625 37.0 35.0 37.0 35.0 37.0 8 35.7978863996311 37.0 35.0 37.0 35.0 37.0 9 37.606612045985045 39.0 37.0 39.0 35.0 39.0 10 36.82598962940415 39.0 37.0 39.0 32.0 39.0 11 36.50015671926306 39.0 35.0 39.0 32.0 39.0 12 35.546879403020164 37.0 35.0 39.0 31.0 39.0 13 35.061648686647366 37.0 34.0 39.0 30.0 39.0 14 35.918073498320545 38.0 34.0 40.0 29.0 41.0 15 36.351491922176834 38.0 35.0 40.0 31.0 41.0 16 36.55120123808218 38.0 35.0 40.0 32.0 41.0 17 36.461787624301735 38.0 35.0 40.0 31.0 41.0 18 36.41181979695814 38.0 35.0 40.0 31.0 41.0 19 36.337393216165594 37.0 35.0 40.0 31.0 41.0 20 36.186813882312876 37.0 35.0 40.0 31.0 41.0 21 36.00306657404156 37.0 34.0 40.0 30.0 41.0 22 35.9086153401034 37.0 34.0 40.0 30.0 41.0 23 35.92956599312545 37.0 34.0 40.0 30.0 41.0 24 35.75043738236637 36.0 34.0 40.0 30.0 41.0 25 35.632906223110965 36.0 34.0 40.0 30.0 41.0 26 35.550799644970596 36.0 34.0 40.0 30.0 41.0 27 35.510802327281056 36.0 34.0 40.0 30.0 41.0 28 35.59720436945361 36.0 34.0 40.0 30.0 41.0 29 35.70145884537083 36.0 34.0 40.0 30.0 41.0 30 35.686248035358275 36.0 34.0 40.0 30.0 41.0 31 35.49820676997078 36.0 34.0 40.0 30.0 41.0 32 35.29214429624763 36.0 34.0 40.0 29.0 41.0 33 35.17008636135544 36.0 34.0 40.0 29.0 41.0 34 35.07981757275014 36.0 34.0 40.0 28.0 41.0 35 34.928159287047905 36.0 34.0 40.0 27.0 41.0 36 34.70096307000981 36.0 34.0 40.0 25.0 41.0 37 34.60531835860682 36.0 33.0 40.0 25.0 41.0 38 34.570663058105175 35.0 33.0 40.0 26.0 41.0 39 34.60186902790356 36.0 33.0 40.0 26.0 41.0 40 34.44661750102094 36.0 33.0 40.0 24.0 41.0 41 34.46334954272634 36.0 34.0 40.0 25.0 41.0 42 34.404606190109504 36.0 33.0 40.0 24.0 41.0 43 34.29703273172224 35.0 33.0 40.0 24.0 41.0 44 34.158415297005604 35.0 33.0 40.0 24.0 41.0 45 34.09594082039521 35.0 33.0 40.0 24.0 41.0 46 34.01496216887405 35.0 33.0 40.0 23.0 41.0 47 33.995436304921434 35.0 33.0 40.0 24.0 41.0 48 33.925061067770535 35.0 33.0 39.0 23.0 41.0 49 33.873279667031845 35.0 33.0 39.0 24.0 41.0 50 33.698668790413606 35.0 33.0 39.0 24.0 41.0 51 33.322309740554275 35.0 32.0 39.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 3.0 13 4.0 14 12.0 15 34.0 16 92.0 17 271.0 18 619.0 19 1246.0 20 2306.0 21 3623.0 22 5529.0 23 8083.0 24 11522.0 25 16423.0 26 21878.0 27 26153.0 28 29563.0 29 34188.0 30 40637.0 31 49937.0 32 62446.0 33 81653.0 34 137432.0 35 195943.0 36 92548.0 37 110075.0 38 158305.0 39 236649.0 40 40.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.639068002597924 24.07569540405692 31.519634361903957 13.765602231441198 2 29.03864787441965 26.53972908664315 31.29781632803753 13.123806710899673 3 27.413438978190406 25.493703351531856 33.08547076809015 14.00738690218759 4 24.195495225336682 28.08891407112945 32.951807319693735 14.763783383840135 5 22.059743191376825 32.89122929685793 31.818681840306084 13.230345671459162 6 20.357078813213242 40.72108943998481 28.39127676471164 10.530554982090305 7 89.41286032244989 3.9422429238992356 5.651311695024314 0.9935850586265665 8 91.81074039303383 2.0344872793686624 4.9396706183027 1.2151017092948084 9 89.14899933243622 3.14237191590806 6.150854346021064 1.5577744056346603 10 49.50196426499419 24.383482995206503 13.536023580221427 12.578529159577883 11 43.700187008274476 24.2203593391872 20.230573215773795 11.848880436764532 12 41.43612107768604 22.674640261480064 22.680667925443824 13.208570735390074 13 21.12296886560871 40.039511337282455 24.325994150152123 14.511525646956708 14 14.559219538069973 43.72829099150552 27.742398739012696 13.970090731411814 15 13.547928216549856 24.68750329637873 48.890081026872835 12.87448746019858 16 15.322773870679484 20.668256965342437 47.90305105280686 16.10591811117122 17 16.571479806572263 20.8146538538623 28.290313393318634 34.3235529462468 18 21.060808580982417 25.03966956346151 34.989911197440655 18.90961065811542 19 27.59117971932183 25.850315020787907 27.417884380363677 19.140620879526587 20 30.569222446417832 25.33125780770848 25.930106222508204 18.169413523365485 21 21.89903060094303 28.291368234512294 30.235591246023624 19.57400991852105 22 22.135616411520676 23.909859299253927 28.616560705357237 25.337963583868163 23 18.995052794801744 30.329321420660122 26.788897645745145 23.88672813879299 24 19.21769963246319 24.673790360861172 39.1746169042822 16.933893102393434 25 16.11202112093453 25.74905026619671 37.35772829400534 20.781200318863423 26 16.592651976244976 36.28683844504353 28.095167772491852 19.025341806219647 27 16.984525479689033 36.45591441922704 30.003827566616987 16.555732534466934 28 13.91101962456695 31.067032144025003 39.0696602055132 15.952288025894845 29 14.270042359408505 25.78725058656705 39.72803180195507 20.214675252069373 30 17.25629777865514 30.954766902699944 33.845634539720045 17.943300778924876 31 27.496168666093034 28.233954735257466 26.598423464490278 17.671453134159222 32 28.509042249403638 27.60044725266611 27.92390677012147 15.966603727808778 33 26.847968752590013 29.15204330273792 26.52435854353556 17.475629401136516 34 19.178595162498286 28.904457005426405 29.075793353596328 22.841154478478977 35 18.13030905340058 28.964130878667643 31.530785540236916 21.374774527694857 36 28.666213587258728 24.98564662518629 28.60382726523379 17.74431252232119 37 19.488944510832464 31.867279881013914 31.140042223786068 17.503733384367553 38 18.80164012736454 33.641070693949885 25.198724546305268 22.35856463238031 39 19.482163388873232 32.20626063317596 29.038949257617837 19.27262672033297 40 22.74802707023886 28.447560076973268 26.485404765169747 22.319008087618123 41 16.726315424641392 26.12690945092502 29.668840141830934 27.477934982602655 42 22.150986954628266 25.953388074568227 26.656891804938766 25.238733165864737 43 22.60065068632489 26.486911681160684 27.411706024800825 23.5007316077136 44 18.565807774782364 31.802934568200758 29.79248259888759 19.838775058129286 45 16.623468408259708 37.51045422968715 24.06657856231173 21.799498799741414 46 21.943559968475316 33.25025203169948 26.816172825181166 17.99001517464403 47 21.229884555165935 28.686632298935965 27.257473173128073 22.826009972770027 48 23.018518490612667 25.468613200282697 30.92319701268974 20.589671296414895 49 20.39000492761529 24.212598721833857 33.00778924875717 22.389607101793683 50 18.646201742899034 33.379018003125346 28.0635225366821 19.911257717293516 51 17.450011829290528 35.08846350324816 25.181093629211265 22.280431038250047 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 678.0 1 1132.5 2 1587.0 3 6258.0 4 10929.0 5 7783.5 6 4638.0 7 4974.0 8 5310.0 9 5944.0 10 6578.0 11 6782.0 12 6986.0 13 6964.5 14 6943.0 15 6573.5 16 6204.0 17 5894.5 18 5585.0 19 5468.0 20 5351.0 21 5597.5 22 5844.0 23 6253.5 24 6663.0 25 7913.0 26 10371.5 27 11580.0 28 14816.0 29 18052.0 30 23182.0 31 28312.0 32 33491.5 33 38671.0 34 41254.5 35 43838.0 36 46327.0 37 48816.0 38 56875.0 39 64934.0 40 80887.0 41 96840.0 42 122352.5 43 147865.0 44 144277.5 45 140690.0 46 135946.5 47 131203.0 48 122207.5 49 113212.0 50 105649.0 51 98086.0 52 86147.0 53 74208.0 54 66313.0 55 58418.0 56 49740.0 57 41062.0 58 35361.5 59 29661.0 60 27222.0 61 24783.0 62 19723.0 63 14663.0 64 12119.0 65 9575.0 66 7468.0 67 5361.0 68 3816.5 69 2272.0 70 1715.0 71 1158.0 72 937.0 73 716.0 74 601.0 75 321.5 76 157.0 77 113.0 78 69.0 79 48.0 80 27.0 81 25.0 82 23.0 83 15.5 84 8.0 85 6.0 86 4.0 87 3.0 88 2.0 89 2.0 90 2.0 91 1.0 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1327214.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.42727730612362 #Duplication Level Percentage of deduplicated Percentage of total 1 81.8270603917066 15.896769933746086 2 7.19771478164441 2.79664002066782 3 2.1264931048224676 1.2393591371083765 4 1.0196536851473568 0.7923637959027426 5 0.5945429336767353 0.57751752214671 6 0.42367253101600244 0.49384822482210844 7 0.33168050042752556 0.4510554341187575 8 0.24672867124115902 0.38346130524587235 9 0.19170463266404986 0.33518691536697554 >10 2.9975611441242394 15.258876479801083 >50 1.8025034389046033 25.386568726239776 >100 1.2363925097723567 35.04850729634278 >500 0.003511370333843865 0.41066251850448554 >1k 3.9015225931598503E-4 0.369884291307104 >5k 3.9015225931598503E-4 0.559298398679328 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7379 0.5559766548574684 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 4880 0.36768750178946275 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.534579954702106E-5 0.0 0.0 0.03639202118121117 0.0 2 7.534579954702106E-5 0.0 0.0 0.11490234430920711 0.0 3 7.534579954702106E-5 0.0 0.0 0.16387711401477079 0.0 4 7.534579954702106E-5 0.0 0.0 0.27719719653349045 0.0 5 7.534579954702106E-5 0.0 0.0 0.45938333983818735 0.0 6 7.534579954702106E-5 0.0 0.0 0.6867769628710969 0.0 7 7.534579954702106E-5 0.0 0.0 0.8018299987793981 0.0 8 7.534579954702106E-5 0.0 0.0 1.1259676284306825 0.0 9 7.534579954702106E-5 0.0 0.0 1.220601952661741 0.0 10 7.534579954702106E-5 0.0 0.0 1.4245630320355271 0.0 11 7.534579954702106E-5 0.0 0.0 1.7114044909110362 0.0 12 7.534579954702106E-5 0.0 0.0 1.914762803888446 0.0 13 7.534579954702106E-5 0.0 0.0 2.0016365107661613 0.0 14 7.534579954702106E-5 0.0 0.0 2.033206400776363 0.0 15 7.534579954702106E-5 0.0 0.0 2.0848182734660727 0.0 16 7.534579954702106E-5 0.0 0.0 2.215543235680154 0.0 17 7.534579954702106E-5 0.0 0.0 2.3602825166099817 0.0 18 7.534579954702106E-5 0.0 0.0 2.554750025240843 0.0 19 7.534579954702106E-5 0.0 0.0 2.6551106302374747 0.0 20 7.534579954702106E-5 0.0 0.0 2.7575055718218766 0.0 21 7.534579954702106E-5 0.0 0.0 2.9112110028977995 0.0 22 7.534579954702106E-5 0.0 0.0 3.0720742849306895 0.0 23 7.534579954702106E-5 0.0 0.0 3.2402461095196404 0.0 24 7.534579954702106E-5 0.0 0.0 3.363662529177661 0.0 25 7.534579954702106E-5 0.0 0.0 3.468995956944396 0.0 26 7.534579954702106E-5 0.0 0.0 3.5735759267156615 0.0 27 7.534579954702106E-5 0.0 0.0 3.6728063447190884 0.0 28 7.534579954702106E-5 0.0 0.0 3.7776123518889944 0.0 29 7.534579954702106E-5 0.0 0.0 3.900953425747468 0.0 30 7.534579954702106E-5 0.0 0.0 4.066111418354538 0.0 31 1.5069159909404211E-4 0.0 0.0 4.217405783844956 0.0 32 1.5069159909404211E-4 0.0 0.0 4.357548971002416 0.0 33 1.5069159909404211E-4 0.0 0.0 4.483225764646846 0.0 34 1.5069159909404211E-4 0.0 0.0 4.620053736624237 0.0 35 1.5069159909404211E-4 0.0 0.0 4.789129710807752 0.0 36 1.5069159909404211E-4 0.0 0.0 4.950821796635659 0.0 37 1.5069159909404211E-4 0.0 0.0 5.112965957260848 0.0 38 1.5069159909404211E-4 0.0 0.0 5.273301818696909 0.0 39 1.5069159909404211E-4 0.0 0.0 5.467467944129583 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCGACA 20 7.033681E-4 45.000004 20 CTATCGT 20 7.033681E-4 45.000004 31 CGTCTAT 20 7.033681E-4 45.000004 43 AAGCGCC 20 7.033681E-4 45.000004 21 CACTGCG 20 7.033681E-4 45.000004 1 CCGCTAT 20 7.033681E-4 45.000004 14 TACGCAG 20 7.033681E-4 45.000004 14 CGTAGGT 20 7.033681E-4 45.000004 10 CTACGCG 40 6.8157533E-9 45.000004 1 CTACGAT 20 7.033681E-4 45.000004 31 GTGTCGA 20 7.033681E-4 45.000004 18 TCGTCTA 20 7.033681E-4 45.000004 22 CATACGT 20 7.033681E-4 45.000004 18 TCCCGAA 40 6.8157533E-9 45.000004 28 ATCGCAC 20 7.033681E-4 45.000004 40 ACGACGA 20 7.033681E-4 45.000004 34 GTCGGTA 35 1.21212E-7 45.000004 37 TACCCGT 25 3.891134E-5 44.999996 1 ACGTTAG 50 2.1827873E-11 44.999996 1 CGTGCGC 25 3.891134E-5 44.999996 18 >>END_MODULE