SRR1548166_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1548166_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1553227
Sequences flagged as poor quality	0
Sequence length	51
%GC	40

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	32537	2.0948000517632	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	2361	0.15200611372323555	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACCGGTG	20	7.0340524E-4	45.000004	40
ACGCCGA	30	2.1659962E-6	45.000004	12
GTTTCGA	20	7.0340524E-4	45.000004	38
CGACGGT	160	0.0	45.000004	28
TCCGATT	20	7.0340524E-4	45.000004	44
CCGGATA	20	7.0340524E-4	45.000004	20
GGTCCGT	20	7.0340524E-4	45.000004	8
ATTCGCA	20	7.0340524E-4	45.000004	44
GTGTCGA	30	2.1659962E-6	45.000004	19
ACGTCGA	20	7.0340524E-4	45.000004	28
TTACGTC	20	7.0340524E-4	45.000004	16
TTACGCG	30	2.1659962E-6	45.000004	1
CCGCGTA	20	7.0340524E-4	45.000004	45
CGCACCG	20	7.0340524E-4	45.000004	30
CGACTTA	20	7.0340524E-4	45.000004	24
CGACTAT	20	7.0340524E-4	45.000004	22
ATTGACG	70	0.0	45.000004	1
TATCGTG	30	2.1659962E-6	45.000004	1
TATCGAG	30	2.1659962E-6	45.000004	1
CCGTTCC	20	7.0340524E-4	45.000004	33