##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548166_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1553227 Sequences flagged as poor quality 0 Sequence length 51 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.15765177916686 31.0 31.0 33.0 30.0 34.0 2 31.519644585112157 31.0 31.0 34.0 30.0 34.0 3 31.439520430690425 31.0 31.0 34.0 30.0 34.0 4 35.337460654495445 37.0 35.0 37.0 33.0 37.0 5 35.24839318399693 37.0 35.0 37.0 33.0 37.0 6 35.31960685720761 37.0 35.0 37.0 33.0 37.0 7 35.795394362832994 37.0 35.0 37.0 35.0 37.0 8 35.80553389813595 37.0 35.0 37.0 35.0 37.0 9 37.56234278698477 39.0 37.0 39.0 35.0 39.0 10 36.815127473318455 39.0 37.0 39.0 32.0 39.0 11 36.51674288433049 39.0 35.0 39.0 32.0 39.0 12 35.81656705684359 37.0 35.0 39.0 31.0 39.0 13 35.517798750601166 37.0 35.0 39.0 30.0 39.0 14 36.515392148089106 38.0 35.0 41.0 31.0 41.0 15 36.80097307090335 38.0 35.0 41.0 31.0 41.0 16 36.94428824634133 38.0 35.0 41.0 32.0 41.0 17 36.84026932315753 38.0 35.0 41.0 32.0 41.0 18 36.701753188683945 38.0 35.0 40.0 31.0 41.0 19 36.51316130868186 37.0 35.0 40.0 31.0 41.0 20 36.28640887648747 37.0 35.0 40.0 31.0 41.0 21 36.132176430103264 37.0 35.0 40.0 31.0 41.0 22 36.02753106918693 37.0 34.0 40.0 30.0 41.0 23 35.99315103330035 37.0 34.0 40.0 31.0 41.0 24 35.793480927127845 36.0 34.0 40.0 30.0 41.0 25 35.64838816219394 36.0 34.0 40.0 30.0 41.0 26 35.54270882491741 36.0 34.0 40.0 30.0 41.0 27 35.429865048701835 36.0 34.0 40.0 30.0 41.0 28 35.42839842469903 36.0 34.0 40.0 29.0 41.0 29 35.4401996617365 36.0 34.0 40.0 30.0 41.0 30 35.31999958795463 36.0 34.0 40.0 29.0 41.0 31 35.11152587483993 36.0 34.0 40.0 29.0 41.0 32 34.80895645002308 35.0 34.0 40.0 27.0 41.0 33 34.52519689652575 35.0 33.0 40.0 25.0 41.0 34 34.22909529643768 35.0 33.0 40.0 23.0 41.0 35 33.93131461145087 35.0 33.0 40.0 22.0 41.0 36 33.66770536438009 35.0 33.0 40.0 21.0 41.0 37 33.53152887504531 35.0 33.0 40.0 20.0 41.0 38 33.462049011509585 35.0 33.0 40.0 20.0 41.0 39 33.43923650567496 35.0 33.0 40.0 20.0 41.0 40 33.30920335533698 35.0 33.0 40.0 18.0 41.0 41 33.26343992217493 35.0 33.0 40.0 18.0 41.0 42 33.18886550388321 35.0 33.0 40.0 18.0 41.0 43 33.0709117212101 35.0 32.0 40.0 18.0 41.0 44 32.94253383439768 35.0 32.0 40.0 18.0 41.0 45 32.87646944071923 35.0 32.0 40.0 18.0 41.0 46 32.74950924752145 35.0 32.0 39.0 18.0 41.0 47 32.72409184233857 35.0 32.0 39.0 18.0 41.0 48 32.61108196033162 35.0 32.0 39.0 18.0 41.0 49 32.518226891497505 35.0 31.0 39.0 17.0 41.0 50 32.3506731469386 35.0 31.0 39.0 15.0 41.0 51 31.996686897665313 35.0 31.0 38.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 3.0 12 6.0 13 5.0 14 22.0 15 70.0 16 161.0 17 451.0 18 1115.0 19 1999.0 20 3633.0 21 5885.0 22 9031.0 23 13480.0 24 19478.0 25 28634.0 26 38196.0 27 41284.0 28 40953.0 29 43071.0 30 48702.0 31 57795.0 32 70669.0 33 90187.0 34 143741.0 35 207150.0 36 130336.0 37 132530.0 38 173996.0 39 250587.0 40 57.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.327247723610263 23.638077370532447 28.03434398191636 18.00033092394093 2 35.05585468189775 25.030790734387182 28.093768650686602 11.819585933028463 3 26.283666199467305 23.724993191594017 36.653689383457795 13.337651225480887 4 23.41280443875879 26.81932518556528 36.098587006277896 13.669283369398034 5 21.641653151793008 30.48530575376297 35.26464579871455 12.608395295729471 6 19.534749267170863 39.09312676125254 31.949740765515923 9.422383206060672 7 82.159465422633 3.989951243443489 12.265882578657209 1.584700755266294 8 83.2782329949196 3.1294202328442653 11.87179980775508 1.720546964481045 9 79.00609505242956 5.562676930030189 13.276359476110061 2.1548685414301967 10 44.6823934943186 23.375849119285206 21.000407538627645 10.94134984776855 11 37.89504045448604 23.889489430714246 24.830948728035246 13.384521386764458 12 33.55652457754083 23.239101560815 28.925971541828723 14.278402319815456 13 19.243935368107817 37.85332086037649 29.314710599287807 13.588033172227885 14 14.976175407715678 39.978766786825105 31.060366578742194 13.984691226717022 15 13.705594867974868 28.118620137301242 45.67323385442051 12.50255114030338 16 14.873614738863026 24.12686619534685 44.957047488873165 16.04247157691696 17 15.442816793681798 25.178869540640232 31.786532168189197 27.591781497488775 18 19.150903248527097 27.935581856354545 35.78343667731761 17.130078217800744 19 24.122037538621203 29.86453364511433 29.231142646889346 16.782286169375112 20 26.07809418713427 27.615667252758293 29.65393982978663 16.652298730320812 21 19.34688232949852 31.919803093816938 31.351953062881343 17.3813615138032 22 19.69866606748402 28.241783074849973 29.940762039289815 22.118788818376196 23 16.29356172665039 33.57596796862274 28.905498037311993 21.22497226741487 24 17.39880906010519 28.690204329438 38.74610729790301 15.1648793125538 25 15.306391145659969 30.348107520665042 35.99918105981933 18.346320273855657 26 15.110154536329848 37.6375120957851 30.53603884042706 16.716294527457993 27 15.684507158322642 36.99588019008168 31.925339953529008 15.394272698066668 28 14.516616051613834 32.68569243259356 38.256803416371206 14.540888099421398 29 14.662699013086947 29.234876808090508 37.597917110634825 18.504507068187714 30 16.368888771570415 34.099716268130805 33.5825993238593 15.948795636439488 31 23.578910230120904 31.446723498883294 28.65228327861929 16.322082992376515 32 24.225885849267364 31.022059235385424 29.76551399119382 14.986540924153392 33 23.312175232596395 32.18087246745002 27.439002798689437 17.067949501264142 34 17.581847341051887 32.45945376947478 28.987456437468573 20.971242452004763 35 17.915089037210915 31.732579977041347 31.342810806147458 19.00952017960028 36 24.701540727788018 30.601064750999047 27.728850966407357 16.968543554805578 37 18.110038004747537 36.023517489716575 29.94629889900188 15.920145606534009 38 18.16109300186 36.761915676201866 26.1544513454891 18.92253997644903 39 18.533285862272546 36.275058314077725 28.095506967107838 17.096148856541895 40 21.387537043844848 31.6042664723186 26.948089364915752 20.060107118920804 41 16.12642582185347 30.66647695410909 28.736366287735148 24.470730936302292 42 19.938296205255252 30.95053073375624 26.631458247892937 22.479714813095576 43 19.64973567933084 31.770565409949736 27.47331845248634 21.106380458233083 44 17.357218230174983 35.062099744596246 28.8381543715117 18.74252765371707 45 16.151084162199087 39.88863186127977 24.674693396393444 19.285590580127696 46 20.03242282036045 36.28825664246115 26.07893115430005 17.600389382878355 47 19.030637505013758 33.01455614665467 27.550705724275975 20.404100624055594 48 20.407062200180658 30.152450350141997 30.404699377489575 19.035788072187774 49 18.890606459970112 29.853717454048894 30.82884858427004 20.426827501710953 50 17.468728009492494 35.4355802468023 28.440723731946456 18.654968011758744 51 16.891864486002365 36.76648680456881 25.88050555392097 20.461143155507855 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1472.0 1 1778.0 2 2084.0 3 21649.5 4 41215.0 5 27455.5 6 13696.0 7 14861.5 8 16027.0 9 19271.5 10 22516.0 11 24706.0 12 26896.0 13 27232.0 14 27568.0 15 25759.0 16 23950.0 17 21535.0 18 19120.0 19 17258.0 20 15396.0 21 14577.5 22 13759.0 23 13506.5 24 13254.0 25 14328.5 26 16687.5 27 17972.0 28 21866.0 29 25760.0 30 27381.5 31 29003.0 32 34150.0 33 39297.0 34 42287.0 35 45277.0 36 48114.5 37 50952.0 38 60329.0 39 69706.0 40 86827.5 41 103949.0 42 120443.0 43 136937.0 44 141816.5 45 146696.0 46 142860.0 47 139024.0 48 131981.5 49 124939.0 50 113575.0 51 102211.0 52 90069.0 53 77927.0 54 67275.0 55 56623.0 56 48751.5 57 40880.0 58 36025.0 59 31170.0 60 27555.0 61 23940.0 62 19701.5 63 15463.0 64 12132.5 65 8802.0 66 7491.5 67 6181.0 68 4885.5 69 3590.0 70 2806.5 71 2023.0 72 1486.5 73 950.0 74 715.0 75 403.5 76 327.0 77 311.0 78 295.0 79 301.0 80 307.0 81 206.0 82 105.0 83 72.5 84 40.0 85 26.5 86 13.0 87 13.0 88 13.0 89 11.5 90 10.0 91 7.5 92 5.0 93 3.5 94 2.0 95 1.5 96 1.0 97 0.5 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1553227.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.321680181168915 #Duplication Level Percentage of deduplicated Percentage of total 1 79.50608846296939 21.72239921440973 2 7.5917261807771474 4.148374294684003 3 2.9805901255619487 2.4430419048526097 4 1.7233516633289752 1.88339451940639 5 1.1233475570518303 1.5345871343033752 6 0.7962220904856018 1.3052475185657608 7 0.5495364182759522 1.0509980787628446 8 0.4372402779643173 0.9556911229493179 9 0.35210749988490153 0.8658151651121625 >10 3.3893228869394165 20.987294902691705 >50 1.022986155678874 19.931605898903225 >100 0.5236875615913105 20.225936807925653 >500 0.0028448396177881232 0.5379272950696706 >1k 7.112099044470308E-4 0.30021589556266387 >5k 0.0 0.0 >10k+ 2.3706996814901025E-4 2.107470246800948 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 32537 2.0948000517632 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2361 0.15200611372323555 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0545316299549261 0.0 2 0.0 0.0 0.0 0.1711919764464563 0.0 3 0.0 0.0 0.0 0.27993332590793235 0.0 4 0.0 0.0 0.0 0.4102426754106129 0.0 5 0.0 0.0 0.0 0.7226245745148648 0.0 6 0.0 0.0 0.0 1.235427918778131 0.0 7 0.0 0.0 0.0 1.5751078239046836 0.0 8 0.0 0.0 0.0 2.233865365461713 0.0 9 0.0 0.0 0.0 2.543543216799605 0.0 10 0.0 0.0 0.0 2.952755778775414 0.0 11 0.0 0.0 0.0 3.402335910977597 0.0 12 0.0 0.0 0.0 3.727722992196247 0.0 13 0.0 0.0 0.0 3.8903521507158967 0.0 14 0.0 0.0 0.0 3.9661942523533265 0.0 15 0.0 0.0 0.0 4.051822431621392 0.0 16 0.0 0.0 0.0 4.224108903592327 0.0 17 0.0 0.0 0.0 4.429874062194386 0.0 18 0.0 0.0 0.0 4.68720927462631 0.0 19 0.0 0.0 0.0 4.831103245050466 0.0 20 0.0 0.0 0.0 4.973323281143065 0.0 21 0.0 0.0 0.0 5.156941000896842 0.0 22 0.0 0.0 0.0 5.356461096800404 0.0 23 0.0 0.0 0.0 5.596219998750987 0.0 24 0.0 0.0 0.0 5.763227139368554 0.0 25 0.0 0.0 0.0 5.9134305545808825 0.0 26 0.0 0.0 0.0 6.051594519023942 0.0 27 0.0 0.0 0.0 6.187955784956094 0.0 28 0.0 0.0 0.0 6.337708525540697 0.0 29 0.0 0.0 0.0 6.498148693011388 0.0 30 0.0 0.0 0.0 6.700372836681309 0.0 31 6.438208967523743E-5 0.0 0.0 6.878839989261068 0.0 32 6.438208967523743E-5 0.0 0.0 7.047842974658566 0.0 33 6.438208967523743E-5 0.0 0.0 7.213369327213601 0.0 34 6.438208967523743E-5 0.0 0.0 7.387394115605768 0.0 35 6.438208967523743E-5 0.0 0.0 7.58607724434355 0.0 36 6.438208967523743E-5 0.0 0.0 7.775424970078424 0.0 37 6.438208967523743E-5 0.0 0.0 7.971468433139521 0.0 38 6.438208967523743E-5 0.0 0.0 8.160687394695044 0.0 39 6.438208967523743E-5 0.0 0.0 8.349970738340243 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACCGGTG 20 7.0340524E-4 45.000004 40 ACGCCGA 30 2.1659962E-6 45.000004 12 GTTTCGA 20 7.0340524E-4 45.000004 38 CGACGGT 160 0.0 45.000004 28 TCCGATT 20 7.0340524E-4 45.000004 44 CCGGATA 20 7.0340524E-4 45.000004 20 GGTCCGT 20 7.0340524E-4 45.000004 8 ATTCGCA 20 7.0340524E-4 45.000004 44 GTGTCGA 30 2.1659962E-6 45.000004 19 ACGTCGA 20 7.0340524E-4 45.000004 28 TTACGTC 20 7.0340524E-4 45.000004 16 TTACGCG 30 2.1659962E-6 45.000004 1 CCGCGTA 20 7.0340524E-4 45.000004 45 CGCACCG 20 7.0340524E-4 45.000004 30 CGACTTA 20 7.0340524E-4 45.000004 24 CGACTAT 20 7.0340524E-4 45.000004 22 ATTGACG 70 0.0 45.000004 1 TATCGTG 30 2.1659962E-6 45.000004 1 TATCGAG 30 2.1659962E-6 45.000004 1 CCGTTCC 20 7.0340524E-4 45.000004 33 >>END_MODULE