##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548165_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 443912 Sequences flagged as poor quality 0 Sequence length 51 %GC 39 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.899926111481555 31.0 31.0 33.0 31.0 34.0 2 32.34028365982447 33.0 31.0 34.0 31.0 34.0 3 32.187944907999785 33.0 31.0 34.0 30.0 34.0 4 36.064224440880174 37.0 35.0 37.0 35.0 37.0 5 36.07444944042963 37.0 35.0 37.0 35.0 37.0 6 36.159335634089636 37.0 35.0 37.0 35.0 37.0 7 36.29669393933933 37.0 36.0 37.0 35.0 37.0 8 36.31121032997531 37.0 37.0 37.0 35.0 37.0 9 38.170815386833425 39.0 39.0 39.0 37.0 39.0 10 37.837625475319435 39.0 38.0 39.0 35.0 39.0 11 37.629663086377484 39.0 37.0 39.0 35.0 39.0 12 37.43957135648507 39.0 37.0 39.0 35.0 39.0 13 37.4099866640235 39.0 37.0 39.0 35.0 39.0 14 38.695124258862116 40.0 38.0 41.0 35.0 41.0 15 38.774401232676745 40.0 38.0 41.0 35.0 41.0 16 38.803431761249975 40.0 38.0 41.0 35.0 41.0 17 38.72315458919786 40.0 38.0 41.0 35.0 41.0 18 38.43580709690209 40.0 38.0 41.0 35.0 41.0 19 38.19869929175152 40.0 37.0 41.0 35.0 41.0 20 37.901250698336604 40.0 35.0 41.0 34.0 41.0 21 37.84279767161059 40.0 35.0 41.0 34.0 41.0 22 37.76819955306457 39.0 35.0 41.0 34.0 41.0 23 37.676334498729474 39.0 35.0 41.0 34.0 41.0 24 37.52632729009353 39.0 35.0 41.0 34.0 41.0 25 37.42817495359441 39.0 35.0 41.0 33.0 41.0 26 37.39307340193552 39.0 35.0 41.0 33.0 41.0 27 37.35083079529276 39.0 35.0 41.0 33.0 41.0 28 37.3283015552632 39.0 35.0 41.0 33.0 41.0 29 37.25227072032295 39.0 35.0 41.0 33.0 41.0 30 37.12321360990467 39.0 35.0 41.0 33.0 41.0 31 36.91242858945016 39.0 35.0 41.0 33.0 41.0 32 36.5636680242931 39.0 35.0 41.0 32.0 41.0 33 36.13068806430103 39.0 35.0 41.0 30.0 41.0 34 35.63024653534935 39.0 35.0 41.0 26.0 41.0 35 35.20148588008434 39.0 35.0 41.0 23.0 41.0 36 34.98468390131377 38.0 35.0 41.0 21.0 41.0 37 34.862986357656474 38.0 35.0 41.0 21.0 41.0 38 34.74298284344645 38.0 35.0 41.0 20.0 41.0 39 34.63495017030402 38.0 35.0 41.0 18.0 41.0 40 34.54174250752401 38.0 35.0 40.0 18.0 41.0 41 34.42254545946043 38.0 35.0 40.0 18.0 41.0 42 34.34374831047595 38.0 34.0 40.0 18.0 41.0 43 34.258918434284276 38.0 34.0 40.0 18.0 41.0 44 34.127363080971 38.0 34.0 40.0 16.0 41.0 45 34.05513254879345 38.0 34.0 40.0 17.0 41.0 46 33.98011993368055 38.0 34.0 40.0 17.0 41.0 47 33.93521914253275 38.0 34.0 40.0 17.0 41.0 48 33.810460181297195 37.0 34.0 40.0 17.0 41.0 49 33.719809331579235 37.0 33.0 40.0 15.0 41.0 50 33.630311863612604 37.0 33.0 40.0 15.0 41.0 51 33.29707915082268 36.0 33.0 40.0 15.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 1.0 13 4.0 14 8.0 15 7.0 16 22.0 17 58.0 18 75.0 19 199.0 20 393.0 21 612.0 22 1090.0 23 1813.0 24 3145.0 25 6063.0 26 10478.0 27 12199.0 28 11000.0 29 9178.0 30 8216.0 31 8410.0 32 10155.0 33 13519.0 34 23761.0 35 38256.0 36 36793.0 37 43491.0 38 73329.0 39 131605.0 40 31.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 27.98572690082719 21.587837229000343 26.61743769035304 23.808998179819422 2 39.519319144334915 22.445439636684746 26.322784696065888 11.71245652291445 3 25.21828650723567 23.23230730415037 39.59793833011948 11.951467858494476 4 22.938780659229757 25.012615112905262 39.49949539548379 12.549108832381192 5 20.925769071347474 28.76425958298041 38.00978572329651 12.300185622375606 6 19.321847573392926 36.526608877435166 34.797662599794556 9.353880949377354 7 79.73292003820576 2.7453639460073167 16.29331939663717 1.2283966191497413 8 80.63715330966498 2.2218367604390057 16.018715421074447 1.1222945088215683 9 76.01844509722648 5.174674259763196 17.05540737803889 1.7514732649714357 10 33.166032907423094 37.36776658436807 21.61329272468417 7.852907783524662 11 23.74614788516643 23.6028762457424 37.06320171565535 15.587774153435815 12 23.508262898952946 22.587584926742238 38.022851375948385 15.881300798356431 13 20.6525167150246 25.108354809061257 37.90030456486871 16.338823911045434 14 16.94998107733064 28.505424498549264 37.613986555893966 16.930607868226137 15 16.523770477031483 26.791571302420298 41.188118365802225 15.496539854745986 16 20.009371226729623 26.320531997332804 39.16451909387446 14.505577682063112 17 19.711113914469536 26.003577285588136 36.14027104471156 18.145037755230767 18 19.697372452197733 26.53206040836923 37.99198940330516 15.77857773612788 19 21.107336589233903 27.825785290778356 35.2015714826362 15.865306637351548 20 22.363216132927246 27.823307322171964 35.14390239506929 14.669574149831499 21 20.99830597055272 26.945655895763128 36.7439943051776 15.31204382850655 22 20.78542594027645 24.68304528825533 37.24837355151471 17.283155219953507 23 17.985321415055235 27.787489412315953 37.108255690317 17.11893348231181 24 17.8609724449891 27.61786119771486 38.60427291895691 15.91689343833913 25 17.96437131683757 28.918569446196546 36.38806790535061 16.728991331615276 26 17.377768566742958 30.785831426048404 35.138270648236585 16.69812935897205 27 16.668619005568672 29.928679558110616 36.910243471679074 16.49245796464164 28 16.24150732577628 29.131449476472817 38.47226477319829 16.154778424552614 29 17.167591774946388 27.631602659986665 38.31975706896863 16.881048496098323 30 17.942520139126675 28.456766205914686 37.367541314494765 16.233172340463874 31 19.83636396402891 28.496188433743626 35.368045919010974 16.299401683216495 32 19.89020346374957 28.969029897817585 34.88709473949792 16.253671898934925 33 19.326127700985783 29.53423200994792 34.08783722900034 17.05180306006596 34 18.075654634251833 30.367730541188344 34.14325361783416 17.413361206725657 35 18.017084467191697 30.826605273117195 33.42982392906702 17.726486330624088 36 19.965668871307827 31.209564057741172 31.855412784515853 16.96935428643515 37 18.817468327055813 32.37578619185785 31.76057416785309 17.046171313233252 38 18.685685451170503 32.440663915370614 31.01830993530249 17.85534069815639 39 18.776469210113717 31.854511705022613 31.29584241921822 18.073176665645445 40 19.81451278631801 31.137027158535922 31.150318081061112 17.898141974084954 41 18.15337274054317 30.975283389500625 31.496783146209157 19.37456072374705 42 18.948124853574583 31.723855178503847 30.409856007496984 18.91816396042459 43 18.99362936798284 31.428526374596764 31.099407089693454 18.478437167726938 44 18.73141523545207 32.35033069617402 30.818720827551406 18.099533240822506 45 17.957838490511634 32.82182054100813 30.447926616086068 18.77241435239417 46 19.173619996756113 32.29108471949395 30.68783903115933 17.847456252590604 47 18.448025734830324 31.705608318765883 31.399016021193386 18.447349925210403 48 18.623961505884047 31.01425507758294 32.02076087152408 18.34102254500892 49 18.734794283551697 30.448827695579304 32.254591000018024 18.56178702085098 50 17.82019859792031 31.682180251941826 32.11740164717332 18.38021950296455 51 17.477337850745194 32.654670295013425 31.268134224801315 18.59985762944007 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 345.0 1 516.0 2 687.0 3 10598.5 4 20510.0 5 13675.5 6 6841.0 7 6864.0 8 6887.0 9 7368.0 10 7849.0 11 8420.0 12 8991.0 13 8699.5 14 8408.0 15 7873.0 16 7338.0 17 6694.5 18 6051.0 19 5455.0 20 4859.0 21 4687.0 22 4515.0 23 4623.0 24 4731.0 25 5039.0 26 5949.5 27 6552.0 28 7457.5 29 8363.0 30 9257.5 31 10152.0 32 11493.0 33 12834.0 34 14529.5 35 16225.0 36 17441.5 37 18658.0 38 19653.0 39 20648.0 40 22304.0 41 23960.0 42 25695.5 43 27431.0 44 28162.0 45 28893.0 46 28685.0 47 28477.0 48 27891.5 49 27306.0 50 26290.0 51 25274.0 52 23209.5 53 21145.0 54 19434.5 55 17724.0 56 16215.5 57 14707.0 58 13481.5 59 12256.0 60 11215.0 61 10174.0 62 8500.5 63 6827.0 64 5793.5 65 4760.0 66 3907.0 67 3054.0 68 2546.0 69 2038.0 70 1680.5 71 1323.0 72 1044.5 73 766.0 74 617.5 75 369.5 76 270.0 77 196.5 78 123.0 79 97.0 80 71.0 81 49.0 82 27.0 83 22.5 84 18.0 85 16.0 86 14.0 87 9.0 88 4.0 89 4.0 90 4.0 91 3.0 92 2.0 93 2.5 94 3.0 95 1.5 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 443912.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.717172584101945 #Duplication Level Percentage of deduplicated Percentage of total 1 66.44491296065851 29.047837272367406 2 11.010292097441182 9.626776796504197 3 6.240009018106547 8.18386653512749 4 4.148745624551154 7.254857139041623 5 3.102404024912097 6.781416609134733 6 2.37465717081057 6.228797841864056 7 1.7464967647794933 5.344633033840856 8 1.2983261539854238 4.540731883538728 9 0.9629951724198933 3.7889483535303734 >10 2.6463370320213206 14.904833068374629 >50 0.014997821439600864 0.4444938540274486 >100 0.009308992617659962 0.719193768900573 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 5.171662565366644E-4 3.13361384374786 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13860 3.122240444051974 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.014867811638342734 0.0 2 0.0 0.0 0.0 0.04753194326803511 0.0 3 0.0 0.0 0.0 0.08627836147704951 0.0 4 0.0 0.0 0.0 0.12817855791237903 0.0 5 0.0 0.0 0.0 0.23811025608679198 0.0 6 0.0 0.0 0.0 0.49739588026455694 0.0 7 0.0 0.0 0.0 0.6985618771288004 0.0 8 0.0 0.0 0.0 0.9637045180125791 0.0 9 0.0 0.0 0.0 1.1648705148768224 0.0 10 0.0 0.0 0.0 1.3565751770621204 0.0 11 0.0 0.0 0.0 1.4942150696534449 0.0 12 0.0 0.0 0.0 1.5996413703616934 0.0 13 0.0 0.0 0.0 1.6735298888067904 0.0 14 0.0 0.0 0.0 1.7228639910612915 0.0 15 0.0 0.0 0.0 1.758681900917299 0.0 16 0.0 0.0 0.0 1.799005208239471 0.0 17 0.0 0.0 0.0 1.844509722647732 0.0 18 0.0 0.0 0.0 1.903980969201103 0.0 19 0.0 0.0 0.0 1.9456558957631243 0.0 20 0.0 0.0 0.0 1.9925120294112346 0.0 21 0.0 0.0 0.0 2.0386923534394206 0.0 22 0.0 0.0 0.0 2.0945592820198597 0.0 23 0.0 0.0 0.0 2.159437005532628 0.0 24 0.0 0.0 0.0 2.202688821207807 0.0 25 0.0 0.0 0.0 2.2524734632089243 0.0 26 0.0 0.0 0.0 2.302032835336733 0.0 27 0.0 0.0 0.0 2.3549712555641658 0.0 28 0.0 0.0 0.0 2.4076844059182902 0.0 29 0.0 0.0 0.0 2.468056731964894 0.0 30 0.0 0.0 0.0 2.545549568382923 0.0 31 0.0 0.0 0.0 2.6038944655697525 0.0 32 0.0 0.0 0.0 2.6703490781956782 0.0 33 0.0 0.0 0.0 2.731397213862207 0.0 34 0.0 0.0 0.0 2.796049667501667 0.0 35 0.0 0.0 0.0 2.8744435834129285 0.0 36 0.0 0.0 0.0 2.9415740056587794 0.0 37 0.0 0.0 0.0 3.01501198435726 0.0 38 0.0 0.0 0.0 3.1123285696264125 0.0 39 0.0 0.0 0.0 3.238029158932401 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CAATTCG 20 7.0286036E-4 45.0 18 ATATGCG 20 7.0286036E-4 45.0 1 CGCGAAT 20 7.0286036E-4 45.0 24 GCGATTC 20 7.0286036E-4 45.0 9 TTGCACG 20 7.0286036E-4 45.0 1 TATACGG 25 3.8869235E-5 45.0 2 ACGCGCA 20 7.0286036E-4 45.0 17 TATTGCG 30 2.16248E-6 44.999996 1 CGTTTTT 6155 0.0 43.90333 1 GACCGAT 240 0.0 41.249996 9 TGGGCGA 155 0.0 40.64516 6 ATTAGCG 50 1.0786607E-9 40.5 1 TCGTAGG 95 0.0 40.263157 2 ATTGCGG 95 0.0 40.263157 2 AATGCGG 90 0.0 40.0 2 TAGGGAC 585 0.0 40.0 5 GGACCGA 295 0.0 39.66102 8 TTTACGG 80 0.0 39.375 2 AATCGAG 40 3.4518234E-7 39.375 1 GGGACCG 355 0.0 39.295773 7 >>END_MODULE