##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548162_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2235622 Sequences flagged as poor quality 0 Sequence length 51 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.139374634889084 31.0 31.0 33.0 30.0 34.0 2 31.515161328704046 31.0 31.0 34.0 30.0 34.0 3 31.39657911757891 31.0 31.0 34.0 30.0 34.0 4 35.312167262623106 37.0 35.0 37.0 33.0 37.0 5 35.21781723386154 37.0 35.0 37.0 33.0 37.0 6 35.28216576863173 37.0 35.0 37.0 32.0 37.0 7 35.79493894763963 37.0 35.0 37.0 35.0 37.0 8 35.81912103208861 37.0 35.0 37.0 35.0 37.0 9 37.545403918909365 39.0 37.0 39.0 35.0 39.0 10 36.83766799575241 39.0 37.0 39.0 32.0 39.0 11 36.514366471612824 39.0 35.0 39.0 32.0 39.0 12 36.122438855942555 38.0 35.0 39.0 31.0 39.0 13 35.958450489394004 38.0 35.0 39.0 31.0 39.0 14 36.96045395867459 39.0 35.0 41.0 31.0 41.0 15 37.163868489395796 39.0 35.0 41.0 32.0 41.0 16 37.241122604805284 39.0 35.0 41.0 32.0 41.0 17 37.086856364805854 39.0 35.0 41.0 32.0 41.0 18 36.91133161151572 39.0 35.0 40.0 31.0 41.0 19 36.72820494699015 38.0 35.0 40.0 31.0 41.0 20 36.49974906312427 38.0 35.0 40.0 31.0 41.0 21 36.36215961374508 38.0 35.0 40.0 31.0 41.0 22 36.2847180784587 38.0 35.0 40.0 31.0 41.0 23 36.209415992506784 38.0 35.0 40.0 30.0 41.0 24 36.02142177881592 37.0 35.0 40.0 30.0 41.0 25 35.91904534845336 37.0 34.0 40.0 30.0 41.0 26 35.835490972982015 37.0 34.0 40.0 30.0 41.0 27 35.74825126966902 37.0 34.0 40.0 30.0 41.0 28 35.73057073154585 37.0 34.0 40.0 30.0 41.0 29 35.709467879632605 37.0 34.0 40.0 30.0 41.0 30 35.57457700809886 37.0 34.0 40.0 29.0 41.0 31 35.359872554483715 37.0 34.0 40.0 28.0 41.0 32 35.053802029144464 37.0 34.0 40.0 26.0 41.0 33 34.72850240335799 37.0 33.0 40.0 24.0 41.0 34 34.36646087755444 37.0 33.0 40.0 23.0 41.0 35 34.0287105780852 37.0 33.0 40.0 21.0 41.0 36 33.78854475398793 37.0 33.0 40.0 19.0 41.0 37 33.67315852143162 37.0 33.0 40.0 18.0 41.0 38 33.555580505112225 36.0 33.0 40.0 18.0 41.0 39 33.50885391179725 36.0 33.0 40.0 18.0 41.0 40 33.38279905994842 36.0 33.0 40.0 18.0 41.0 41 33.298083933688254 36.0 32.0 40.0 18.0 41.0 42 33.23824734235036 36.0 32.0 40.0 17.0 41.0 43 33.123304834180374 36.0 32.0 40.0 17.0 41.0 44 32.96901533443489 36.0 32.0 40.0 15.0 41.0 45 32.879744876369976 35.0 31.0 40.0 15.0 41.0 46 32.77011453635722 35.0 31.0 40.0 15.0 41.0 47 32.72989262048772 35.0 31.0 40.0 15.0 41.0 48 32.59696272446773 35.0 31.0 40.0 15.0 41.0 49 32.48199874576292 35.0 31.0 40.0 15.0 41.0 50 32.340596039938774 35.0 31.0 39.0 13.0 41.0 51 32.03953172763553 35.0 30.0 39.0 13.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 2.0 13 11.0 14 33.0 15 90.0 16 278.0 17 734.0 18 1710.0 19 3366.0 20 5737.0 21 8848.0 22 13239.0 23 19660.0 24 28307.0 25 42030.0 26 58005.0 27 63864.0 28 62747.0 29 63487.0 30 69436.0 31 81112.0 32 95697.0 33 119013.0 34 173226.0 35 233537.0 36 183041.0 37 210684.0 38 284866.0 39 412781.0 40 81.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 27.523883733475518 23.00165233657568 28.422112503813256 21.052351426135544 2 35.95017404552291 23.923498695217706 27.675161543409395 12.451165715849996 3 25.706313500224994 23.74972155400153 38.12433407794341 12.41963086783007 4 22.4031611784103 26.633840604538694 37.34875573777678 13.614242479274225 5 20.84654740380977 30.20846100101001 36.15647010093836 12.78852149424187 6 20.083717193693744 37.66808521297428 32.7900691619603 9.458128431371673 7 82.11790723118668 2.906663112100346 13.540124403857181 1.4353052528558048 8 83.22328193227656 2.1011154837445685 13.195477589681975 1.480124994296889 9 78.59562126334416 4.936523258404149 14.502720048380272 1.9651354298714185 10 36.08807750147386 36.08642248108133 19.4431795715018 8.382320445943007 11 27.91178472926103 23.253260166521887 34.81599304354672 14.018962060670365 12 27.045314458347608 22.55318654047956 34.877184067789635 15.524314933383193 13 19.90707731450129 29.429080586968638 35.77089507975856 14.89294701877151 14 15.7692132211975 32.91263013156965 35.83262286737203 15.485533779860816 15 14.8750101761389 26.810391023169387 44.01464111553742 14.299957685154288 16 17.963233498328428 24.941425697188524 42.30030837055638 14.795032433926666 17 18.07470135827971 24.096112849131025 35.790039639974914 22.03914615261435 18 19.161691913928205 26.202953808828145 37.829337875544255 16.80601640169939 19 22.214533583942185 27.085213868891966 33.86583241710808 16.834420130057765 20 23.496906006471576 27.60238537641873 32.77052202921603 16.13018658789366 21 20.645082218729286 27.959735590363664 35.23444482117281 16.16073736973424 22 19.98660775390473 25.032899121586745 35.08267497814926 19.89781814635927 23 16.76844296576076 29.608404283013854 34.14830414086102 19.474848610364365 24 17.02438963295226 28.159322103647217 38.65980027034982 16.156487993050703 25 16.797741299736717 29.24769929800297 36.591024779681 17.36353462257931 26 16.728767206620798 32.577466136940856 33.32088340515526 17.37288325128309 27 16.298909207370478 31.592371161135468 35.65634083042661 16.452378801067443 28 15.381401685973747 30.112738199928252 38.643250066424464 15.862610047673535 29 16.411271672939343 27.183620486826488 38.872984789020684 17.53212305121349 30 18.22441360838281 28.51336227680708 36.6974828481738 16.56474126663631 31 21.621365329201446 28.24426490703706 33.71643327897113 16.417936484790363 32 22.088438922143368 28.3804686123146 33.691160670274314 15.839931795267715 33 21.598776537357388 28.810281881284045 32.68311906037783 16.90782252098074 34 18.042137713799562 29.429348968653912 33.89463871799436 18.63387459955216 35 18.223474272484346 29.58241598982297 33.695812619485764 18.498297118206924 36 22.203395744003235 29.192546861678764 31.575642036086606 17.0284153582314 37 18.826438458737655 31.400970289252832 32.825495544416725 16.947095707592787 38 18.502949067418374 32.370767508997496 30.466823103368995 18.659460320215135 39 18.817179290595636 31.843978991081677 30.725364126851495 18.613477591471188 40 20.53477734608087 30.445084186861642 30.335629189549934 18.68450927750756 41 17.668952980423345 29.445362409208713 31.361562911798146 21.524121698569797 42 20.13122075198759 30.03378925417624 29.624104611602498 20.21088538223367 43 19.767116265629877 30.515981682055376 30.17115594675665 19.545746105558095 44 19.037610114768956 32.02330268712689 30.522557033344633 18.416530164759518 45 18.060790240926238 33.736159332838916 28.545389157916677 19.65766126831817 46 20.315196397244257 32.22588612922936 29.19621474471087 18.262702728815515 47 19.03380804089421 31.162065859076353 30.187974532367278 19.616151567662154 48 19.8784946650194 29.66829812911127 31.253628744036337 19.199578461832996 49 19.76291161922722 28.471271082499634 31.611515721351818 20.15430157692132 50 18.311503465254862 32.153288883362215 30.670837914459597 18.864369736923326 51 17.65128451947601 32.645948196967105 29.46871161582772 20.23405566772916 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1759.0 1 2386.0 2 3013.0 3 37049.5 4 71086.0 5 47569.0 6 24052.0 7 24235.5 8 24419.0 9 27029.0 10 29639.0 11 31745.0 12 33851.0 13 34539.5 14 35228.0 15 33940.5 16 32653.0 17 30294.5 18 27936.0 19 26442.0 20 24948.0 21 23422.0 22 21896.0 23 23034.0 24 24172.0 25 24448.0 26 27984.0 27 31244.0 28 37026.0 29 42808.0 30 47054.0 31 51300.0 32 57994.0 33 64688.0 34 70564.0 35 76440.0 36 85469.5 37 94499.0 38 102724.5 39 110950.0 40 127108.5 41 143267.0 42 155965.0 43 168663.0 44 172582.0 45 176501.0 46 181368.5 47 186236.0 48 177725.5 49 169215.0 50 158140.5 51 147066.0 52 129081.5 53 111097.0 54 98096.5 55 85096.0 56 73188.5 57 61281.0 58 53303.5 59 45326.0 60 39071.0 61 32816.0 62 27510.5 63 22205.0 64 18466.5 65 14728.0 66 11150.5 67 7573.0 68 5963.0 69 4353.0 70 4056.5 71 3760.0 72 2893.0 73 2026.0 74 1735.0 75 1210.0 76 976.0 77 668.0 78 360.0 79 277.0 80 194.0 81 133.5 82 73.0 83 53.0 84 33.0 85 22.5 86 12.0 87 10.5 88 9.0 89 8.0 90 7.0 91 3.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2235622.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.174238390273548 #Duplication Level Percentage of deduplicated Percentage of total 1 78.81861792278212 21.418359130255684 2 7.131837361922713 3.876044972670948 3 2.9581112563294707 2.4115326139334585 4 1.8039340262987018 1.9608213308386766 5 1.1939668281028877 1.6222569608473316 6 0.8148999080013026 1.3286570618543627 7 0.6106397190100668 1.1615568506464444 8 0.4622321758017029 1.0048645869512245 9 0.3855546098136293 0.9429437591590019 >10 4.418340096658154 27.91608239784728 >50 1.0294375525467592 19.657829639559793 >100 0.369272409000001 13.381369139715071 >500 0.0016611230170255923 0.2851478188180342 >1k 0.0013288984136204738 0.6618390564366025 >5k 0.0 0.0 >10k+ 1.6611230170255923E-4 2.3706946804660975 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 52519 2.349189621501309 No Hit CGTTTCTGTCTCTTATACACATCTGACGCGTTGCTAGTCGTATGCCGTCTT 2920 0.1306124201676312 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCGTTGCTAGTCGTATGCCGTCT 2582 0.1154935852304191 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2294 0.10261126433717328 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.473028087932575E-5 0.0 0.0 0.03457650711971881 0.0 2 4.473028087932575E-5 0.0 0.0 0.11598561832009167 0.0 3 4.473028087932575E-5 0.0 0.0 0.22915322894478585 0.0 4 4.473028087932575E-5 0.0 0.0 0.3466596768147746 0.0 5 4.473028087932575E-5 0.0 0.0 0.6311889934881657 0.0 6 4.473028087932575E-5 0.0 0.0 1.2163952582323845 0.0 7 4.473028087932575E-5 0.0 0.0 1.650771015851517 0.0 8 4.473028087932575E-5 0.0 0.0 2.3629665480121416 0.0 9 4.473028087932575E-5 0.0 0.0 2.7695200709243335 0.0 10 4.473028087932575E-5 0.0 0.0 3.188955914729771 0.0 11 4.473028087932575E-5 0.0 0.0 3.541609449182375 0.0 12 4.473028087932575E-5 0.0 0.0 3.814553623108021 0.0 13 4.473028087932575E-5 0.0 0.0 3.9604637993363814 0.0 14 4.473028087932575E-5 0.0 0.0 4.041783449974996 0.0 15 4.473028087932575E-5 0.0 0.0 4.116706670447867 0.0 16 4.473028087932575E-5 0.0 0.0 4.241414693539427 0.0 17 4.473028087932575E-5 0.0 0.0 4.3989100125155325 0.0 18 4.473028087932575E-5 0.0 0.0 4.5918764442289435 0.0 19 4.473028087932575E-5 0.0 0.0 4.711351024457623 0.0 20 4.473028087932575E-5 0.0 0.0 4.838474482716666 0.0 21 4.473028087932575E-5 0.0 0.0 4.98420573782151 0.0 22 4.473028087932575E-5 0.0 0.0 5.153465120668879 0.0 23 4.473028087932575E-5 0.0 0.0 5.3268844196380245 0.0 24 4.473028087932575E-5 0.0 0.0 5.462775012949416 0.0 25 4.473028087932575E-5 0.0 0.0 5.58059457278556 0.0 26 4.473028087932575E-5 0.0 0.0 5.695998697454221 0.0 27 4.473028087932575E-5 0.0 0.0 5.81346041504333 0.0 28 4.473028087932575E-5 0.0 0.0 5.943133499312496 0.0 29 4.473028087932575E-5 0.0 0.0 6.083944423520613 0.0 30 4.473028087932575E-5 0.0 0.0 6.265594094171555 0.0 31 4.473028087932575E-5 0.0 0.0 6.408954644389794 0.0 32 4.473028087932575E-5 0.0 0.0 6.561932204997088 0.0 33 4.473028087932575E-5 0.0 0.0 6.708468605157759 0.0 34 4.473028087932575E-5 0.0 0.0 6.863727410089899 0.0 35 4.473028087932575E-5 0.0 0.0 7.040456749844115 0.0 36 4.473028087932575E-5 0.0 0.0 7.201843603256722 0.0 37 4.473028087932575E-5 0.0 0.0 7.37579966559642 0.0 38 4.473028087932575E-5 0.0 0.0 7.556152158101861 0.0 39 4.473028087932575E-5 0.0 0.0 7.782532109632129 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCATCG 20 7.034718E-4 45.000004 21 CGTTCCG 20 7.034718E-4 45.000004 40 CGTACTC 20 7.034718E-4 45.000004 42 CCGGTCA 20 7.034718E-4 45.000004 31 CGTTTTT 23900 0.0 43.907955 1 ACGCGAG 80 0.0 42.187504 1 CGGGACG 150 0.0 40.5 6 ATACCGG 100 0.0 40.5 2 ACGGGAC 800 0.0 39.9375 5 AGGGCGA 2055 0.0 39.744526 6 TATAGCG 125 0.0 39.600002 1 GGGCGAT 3950 0.0 39.588608 7 ATAGCGG 385 0.0 39.155846 2 GGCGATC 555 0.0 38.91892 8 ACGTTCG 35 6.250939E-6 38.57143 13 CGTTCGA 35 6.250939E-6 38.57143 14 AGTTCGT 35 6.250939E-6 38.57143 28 TAACGGG 735 0.0 38.265305 3 GTTTTTT 27740 0.0 38.219177 2 GGACCGA 1005 0.0 38.0597 8 >>END_MODULE