##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548161_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2789170 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.15007439489167 31.0 31.0 33.0 30.0 34.0 2 31.53468379482068 31.0 31.0 34.0 30.0 34.0 3 31.657397720468815 31.0 31.0 34.0 30.0 34.0 4 35.464653283951854 37.0 35.0 37.0 33.0 37.0 5 35.31980445795703 37.0 35.0 37.0 33.0 37.0 6 35.361740948023964 37.0 35.0 37.0 33.0 37.0 7 35.7675312010383 37.0 35.0 37.0 35.0 37.0 8 35.75577860080239 37.0 35.0 37.0 35.0 37.0 9 37.50291843093107 39.0 37.0 39.0 35.0 39.0 10 36.790682532796495 39.0 37.0 39.0 32.0 39.0 11 36.50426937045788 39.0 35.0 39.0 32.0 39.0 12 35.83502654911676 37.0 35.0 39.0 31.0 39.0 13 35.50726345113421 37.0 35.0 39.0 30.0 39.0 14 36.44527332503935 38.0 35.0 40.0 30.0 41.0 15 36.72388739302373 38.0 35.0 41.0 31.0 41.0 16 36.86474470899945 38.0 35.0 41.0 32.0 41.0 17 36.73972221126715 38.0 35.0 40.0 31.0 41.0 18 36.67611906050904 38.0 35.0 40.0 31.0 41.0 19 36.606909940950175 38.0 35.0 40.0 31.0 41.0 20 36.48057881018367 38.0 35.0 40.0 31.0 41.0 21 36.30108526909439 38.0 35.0 40.0 30.0 41.0 22 36.23396243326868 38.0 35.0 40.0 30.0 41.0 23 36.18501884073039 38.0 34.0 40.0 30.0 41.0 24 36.01471297912999 38.0 34.0 40.0 30.0 41.0 25 35.896465615218865 37.0 34.0 40.0 30.0 41.0 26 35.832128912902405 37.0 34.0 40.0 30.0 41.0 27 35.79189077754314 37.0 34.0 40.0 30.0 41.0 28 35.813420121398124 37.0 34.0 40.0 30.0 41.0 29 35.849917000397966 37.0 34.0 40.0 30.0 41.0 30 35.78226712606259 37.0 34.0 40.0 30.0 41.0 31 35.64082074595668 37.0 34.0 40.0 29.0 41.0 32 35.478410423172484 37.0 34.0 40.0 29.0 41.0 33 35.35749273081239 37.0 34.0 40.0 28.0 41.0 34 35.204597425040426 37.0 34.0 40.0 27.0 41.0 35 35.057883169545065 37.0 34.0 40.0 27.0 41.0 36 34.854621984317916 37.0 34.0 40.0 25.0 41.0 37 34.76836263117702 37.0 33.0 40.0 25.0 41.0 38 34.68582732497482 37.0 33.0 40.0 25.0 41.0 39 34.65804630051234 37.0 33.0 40.0 25.0 41.0 40 34.518942194272846 37.0 33.0 40.0 24.0 41.0 41 34.45928788851164 36.0 33.0 40.0 24.0 41.0 42 34.39847696626595 36.0 33.0 40.0 24.0 41.0 43 34.28453554283174 36.0 33.0 40.0 23.0 41.0 44 34.15278344453726 36.0 33.0 40.0 23.0 41.0 45 34.04359433092999 36.0 33.0 40.0 23.0 41.0 46 33.95289207900558 35.0 33.0 40.0 23.0 41.0 47 33.9006095003173 35.0 33.0 40.0 23.0 41.0 48 33.7737821645866 35.0 33.0 40.0 23.0 41.0 49 33.68207961508262 35.0 33.0 39.0 23.0 41.0 50 33.50980829422373 35.0 32.0 39.0 23.0 41.0 51 33.13840927587777 35.0 32.0 39.0 22.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 5.0 11 4.0 12 5.0 13 13.0 14 41.0 15 114.0 16 285.0 17 746.0 18 1689.0 19 3135.0 20 5328.0 21 8647.0 22 12608.0 23 18269.0 24 25667.0 25 35120.0 26 46491.0 27 55191.0 28 62746.0 29 71802.0 30 84730.0 31 103094.0 32 126035.0 33 160632.0 34 253408.0 35 338304.0 36 214422.0 37 262659.0 38 370116.0 39 527799.0 40 64.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.580301666804104 24.017109032436174 29.372824173499644 14.02976512726008 2 29.56001247683002 25.978660318302577 30.865239479845258 13.596087725022137 3 28.78806239849131 25.457250723333463 31.930215798965282 13.824471079209943 4 24.74008396763195 28.280061810502765 31.55709404589896 15.422760175966326 5 23.153267818024716 32.362745906488314 31.050670988143423 13.433315287343547 6 21.64156361928459 40.992087251763074 27.087018718830336 10.279330410122007 7 88.31555624074545 3.849173768540462 6.347945804665904 1.4873241860481792 8 89.6654560317227 2.667782888816386 5.957399513116806 1.7093615663441097 9 85.23184316481247 5.116826869642224 7.389761111728579 2.261568853816727 10 45.35126937404318 29.145982496585006 14.085982568290925 11.416765561080895 11 38.10398792472313 23.352968804339643 23.598848402929903 14.94419486800733 12 35.095852888135184 22.22320618678675 25.87189020389578 16.809050721182288 13 23.052592706790907 33.29520968603563 27.070813180982157 16.581384426191303 14 17.490041840404135 36.239849130744986 29.679295274221364 16.59081375462951 15 16.595331227569492 25.119623400509827 42.77706271041205 15.50798266150862 16 20.120609356905458 22.552730740686297 40.443680378033605 16.882979524374637 17 20.05711376502687 23.01046547897762 28.677384311461836 28.255036444533676 18 22.52609199152436 24.488324483627746 33.61078743855699 19.374796086290903 19 27.646719274909742 25.59732823743264 27.17926838450148 19.576684103156136 20 28.96022831164827 25.572553842182444 27.098455813019644 18.368762033149647 21 23.277964412352063 26.99566537715521 30.59333063241036 19.13303957808237 22 24.380442927465875 23.155526554494706 28.689000670450348 23.775029847589067 23 20.53754342689761 28.036476801342335 28.51722913985164 22.90875063190842 24 20.486237841364993 25.620345837650625 35.60324397580642 18.290172345177957 25 20.068443300336657 25.98626114578889 33.39208438352628 20.553211170348167 26 18.91404969937293 32.20061882208686 27.84093475836898 21.044396720171235 27 19.12461413251971 31.627150729428465 30.21393461137184 19.03430052667998 28 17.38320002007766 29.100556796466332 35.441403715083695 18.07483946837231 29 18.30397573471678 26.172660684002768 34.63374408874324 20.889619492537207 30 20.38186987526755 28.83997748434122 31.067593585188426 19.710559055202804 31 26.135337752808184 26.906750036749283 26.85182330227272 20.106088908169813 32 27.119322235647164 27.33210955230409 27.91443332604323 17.634134886005516 33 25.643793673386707 27.364233804321714 26.715402790077334 20.27656973221424 34 20.22142787997863 28.801829935070288 28.9045128120552 22.07222937289588 35 20.216695289279606 27.11659741069924 30.82056669188325 21.846140608137905 36 27.037362369450406 26.165382533155025 28.170566871148043 18.626688226246518 37 20.662992933381616 30.491651638300997 29.27584191712947 19.569513511187917 38 20.72372784735244 30.8215705747588 26.208872173442277 22.245829404446486 39 20.76850819419397 29.39784953946873 28.500091425047597 21.333550841289703 40 23.346049183090308 25.99640753342392 27.726743081275075 22.930800202210694 41 19.07578240121613 25.85848119691521 28.69875267552713 26.36698372634153 42 22.88236285346537 26.02985834495567 27.085512894517006 24.002265907061958 43 22.023182523833253 26.46654739582026 28.149700448520527 23.360569631825957 44 20.405174299164266 29.298536840708884 28.543545212375008 21.752743647751842 45 18.782756160434825 33.01207886217047 25.91706493329557 22.288100044099142 46 21.912504436803783 30.397860295356683 27.03782845792834 20.651806809911193 47 21.600619539146056 28.280958134498796 28.267477421598542 21.850944904756613 48 22.55570653635311 26.479669579122106 30.02283833541878 20.941785549106008 49 21.932761359114004 25.54799456469129 30.56866379603968 21.950580280155027 50 20.30808448391457 30.27155031783649 28.395078105673015 21.02528709257593 51 19.57915795738517 31.47947238784298 26.610066794064185 22.331302860707666 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2022.0 1 3041.0 2 4060.0 3 14217.5 4 24375.0 5 17587.5 6 10800.0 7 11053.5 8 11307.0 9 12340.5 10 13374.0 11 13779.0 12 14184.0 13 13967.5 14 13751.0 15 13161.0 16 12571.0 17 12439.5 18 12308.0 19 12006.5 20 11705.0 21 12544.0 22 13383.0 23 15538.5 24 17694.0 25 20128.5 26 26428.0 27 30293.0 28 32640.5 29 34988.0 30 44169.0 31 53350.0 32 63647.0 33 73944.0 34 81128.0 35 88312.0 36 93711.0 37 99110.0 38 110069.5 39 121029.0 40 154113.5 41 187198.0 42 216392.5 43 245587.0 44 248706.5 45 251826.0 46 245682.0 47 239538.0 48 227943.0 49 216348.0 50 206391.5 51 196435.0 52 175330.0 53 154225.0 54 140786.0 55 127347.0 56 117797.0 57 108247.0 58 102013.0 59 95779.0 60 88421.0 61 81063.0 62 70954.5 63 60846.0 64 54658.0 65 48470.0 66 39984.5 67 31499.0 68 26766.0 69 22033.0 70 18810.5 71 15588.0 72 12663.5 73 9739.0 74 8038.5 75 4625.5 76 2913.0 77 2217.0 78 1521.0 79 1165.5 80 810.0 81 571.5 82 333.0 83 258.0 84 183.0 85 141.0 86 99.0 87 70.5 88 42.0 89 30.0 90 18.0 91 16.0 92 14.0 93 10.0 94 6.0 95 3.5 96 1.0 97 0.5 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2789170.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.137458733922262 #Duplication Level Percentage of deduplicated Percentage of total 1 82.66882605121265 15.820712471368797 2 7.050854356248967 2.6987086856322127 3 2.0623062022117336 1.18401899524617 4 1.0284236982738382 0.787256643468132 5 0.5845984772539303 0.5593864617180443 6 0.4016905888087128 0.46124022402790055 7 0.28991904063108354 0.3883819573378985 8 0.24110001486665253 0.3691233268206885 9 0.1863300654950071 0.3209295545369758 >10 2.4791382241500477 12.139084294516032 >50 1.5659939047077478 22.02854517914802 >100 1.4366606227674237 42.04079766701703 >500 0.00359165063972166 0.42655534846213594 >1k 1.8903424419587682E-4 0.0438819131273489 >5k 1.8903424419587682E-4 0.19390523855118724 >10k+ 1.8903424419587682E-4 0.5374720390214531 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14857 0.532667424359218 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 5360 0.19217186474829429 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.170591968219937E-5 0.0 0.0 0.0226232176597339 0.0 2 7.170591968219937E-5 0.0 0.0 0.07317589103568445 0.0 3 7.170591968219937E-5 0.0 0.0 0.11558994252770538 0.0 4 7.170591968219937E-5 0.0 0.0 0.22214493917545364 0.0 5 7.170591968219937E-5 0.0 0.0 0.37735240232757417 0.0 6 7.170591968219937E-5 0.0 0.0 0.6719920263017314 0.0 7 7.170591968219937E-5 0.0 0.0 0.8116751578426556 0.0 8 7.170591968219937E-5 0.0 0.0 1.1809606442059823 0.0 9 7.170591968219937E-5 0.0 0.0 1.3151224199313774 0.0 10 7.170591968219937E-5 0.0 0.0 1.5403148606933246 0.0 11 7.170591968219937E-5 0.0 0.0 1.7814977215444021 0.0 12 7.170591968219937E-5 0.0 0.0 1.97965703058616 0.0 13 7.170591968219937E-5 0.0 0.0 2.0719066962573094 0.0 14 7.170591968219937E-5 0.0 0.0 2.107723803138568 0.0 15 7.170591968219937E-5 0.0 0.0 2.1567706522011925 0.0 16 7.170591968219937E-5 0.0 0.0 2.2557248213626275 0.0 17 7.170591968219937E-5 0.0 0.0 2.3732866766815937 0.0 18 7.170591968219937E-5 0.0 0.0 2.5331191716532158 0.0 19 7.170591968219937E-5 0.0 0.0 2.6196323637497896 0.0 20 7.170591968219937E-5 0.0 0.0 2.709408175191903 0.0 21 7.170591968219937E-5 0.0 0.0 2.8382637128608152 0.0 22 7.170591968219937E-5 0.0 0.0 2.970883811313043 0.0 23 7.170591968219937E-5 0.0 0.0 3.110889619492537 0.0 24 7.170591968219937E-5 0.0 0.0 3.2196674996504338 0.0 25 7.170591968219937E-5 0.0 0.0 3.309945252530323 0.0 26 7.170591968219937E-5 0.0 0.0 3.407572862177637 0.0 27 7.170591968219937E-5 0.0 0.0 3.498460115374825 0.0 28 7.170591968219937E-5 0.0 0.0 3.5956933424638873 0.0 29 7.170591968219937E-5 0.0 0.0 3.7101359902766773 0.0 30 7.170591968219937E-5 0.0 0.0 3.845588472556352 0.0 31 7.170591968219937E-5 0.0 0.0 3.972221126715116 0.0 32 7.170591968219937E-5 0.0 0.0 4.095304337849611 0.0 33 7.170591968219937E-5 0.0 0.0 4.21849510786363 0.0 34 7.170591968219937E-5 0.0 0.0 4.349322558323802 0.0 35 1.0755887952329904E-4 0.0 0.0 4.500944725491813 0.0 36 1.0755887952329904E-4 0.0 0.0 4.641488328068924 0.0 37 1.0755887952329904E-4 0.0 0.0 4.7838962845577715 0.0 38 1.0755887952329904E-4 0.0 0.0 4.940932248661788 0.0 39 1.0755887952329904E-4 0.0 0.0 5.168204161094519 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCGATA 30 2.16662E-6 45.000004 11 GTCGAAC 25 3.8922437E-5 45.0 22 TAGTCGA 35 1.2127566E-7 45.0 12 CGTTTTT 8930 0.0 41.094624 1 TAATACG 55 6.184564E-11 40.90909 1 CTCACGA 325 0.0 40.153843 24 GTATGCG 205 0.0 39.512196 1 CGGGTAC 410 0.0 38.963417 6 CGACGGT 345 0.0 38.47826 28 CGGTCTA 340 0.0 38.38235 31 ACGGGTA 385 0.0 37.987015 5 TCGTTAG 95 0.0 37.894737 1 TATGGGA 2620 0.0 37.78626 4 CGAACTA 30 1.1403394E-4 37.500004 18 CGACCGT 30 1.1403394E-4 37.500004 32 TAACGGG 790 0.0 37.310123 3 TACGGGA 945 0.0 36.904762 4 GTAGGGC 1245 0.0 36.68675 4 CGGTAGT 870 0.0 36.465515 12 TTAGACG 105 0.0 36.42857 1 >>END_MODULE