##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548160_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3035601 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.067552685613162 31.0 31.0 33.0 30.0 34.0 2 31.449808785805512 31.0 31.0 34.0 30.0 34.0 3 31.54560398418633 31.0 31.0 34.0 30.0 34.0 4 35.37116142734173 37.0 35.0 37.0 33.0 37.0 5 35.208656539512276 37.0 35.0 37.0 32.0 37.0 6 35.26058661859711 37.0 35.0 37.0 32.0 37.0 7 35.725315678839216 37.0 35.0 37.0 35.0 37.0 8 35.7277171802223 37.0 35.0 37.0 35.0 37.0 9 37.44599043154881 39.0 37.0 39.0 35.0 39.0 10 36.66056573311183 39.0 37.0 39.0 32.0 39.0 11 36.34723074606973 38.0 35.0 39.0 32.0 39.0 12 35.72004719987903 37.0 35.0 39.0 31.0 39.0 13 35.43978342344728 37.0 35.0 39.0 30.0 39.0 14 36.353208804450915 38.0 35.0 40.0 30.0 41.0 15 36.63321002990841 38.0 35.0 40.0 31.0 41.0 16 36.751526962865015 38.0 35.0 40.0 31.0 41.0 17 36.61915251707981 38.0 35.0 40.0 31.0 41.0 18 36.55799362300908 38.0 35.0 40.0 31.0 41.0 19 36.496910167047645 38.0 35.0 40.0 31.0 41.0 20 36.349967601143895 38.0 35.0 40.0 30.0 41.0 21 36.18267651117522 38.0 34.0 40.0 30.0 41.0 22 36.103158155501994 38.0 34.0 40.0 30.0 41.0 23 36.073160800777174 38.0 34.0 40.0 30.0 41.0 24 35.92033505062095 37.0 34.0 40.0 30.0 41.0 25 35.8077978627626 37.0 34.0 40.0 30.0 41.0 26 35.74957248992868 37.0 34.0 40.0 30.0 41.0 27 35.72206887532321 37.0 34.0 40.0 29.0 41.0 28 35.76438471327424 37.0 34.0 40.0 29.0 41.0 29 35.805257673851074 37.0 34.0 40.0 30.0 41.0 30 35.7107182399795 37.0 34.0 40.0 29.0 41.0 31 35.566978664192035 37.0 34.0 40.0 29.0 41.0 32 35.400522664210484 37.0 34.0 40.0 28.0 41.0 33 35.27305564861785 37.0 34.0 40.0 27.0 41.0 34 35.13212210695674 37.0 34.0 40.0 27.0 41.0 35 34.978556799790226 37.0 34.0 40.0 26.0 41.0 36 34.78833944250249 37.0 33.0 40.0 25.0 41.0 37 34.72232944975311 37.0 33.0 40.0 25.0 41.0 38 34.651275974675194 37.0 33.0 40.0 24.0 41.0 39 34.63858458341528 37.0 33.0 40.0 24.0 41.0 40 34.510019597437214 37.0 33.0 40.0 24.0 41.0 41 34.47237565147725 37.0 33.0 40.0 24.0 41.0 42 34.41077994110557 37.0 33.0 40.0 24.0 41.0 43 34.306255005186785 36.0 33.0 40.0 23.0 41.0 44 34.179683364183894 36.0 33.0 40.0 23.0 41.0 45 34.091901076590766 36.0 33.0 40.0 23.0 41.0 46 33.98838648425798 36.0 33.0 40.0 23.0 41.0 47 33.95749013127878 36.0 33.0 40.0 23.0 41.0 48 33.854631422245546 36.0 33.0 40.0 23.0 41.0 49 33.76180169923518 36.0 33.0 40.0 23.0 41.0 50 33.61462293628181 35.0 32.0 39.0 23.0 41.0 51 33.26533592524182 35.0 32.0 39.0 22.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 1.0 10 1.0 11 10.0 12 7.0 13 15.0 14 55.0 15 128.0 16 355.0 17 836.0 18 1875.0 19 3547.0 20 6105.0 21 9601.0 22 14186.0 23 20549.0 24 28544.0 25 39641.0 26 52682.0 27 62154.0 28 69972.0 29 80380.0 30 95538.0 31 114706.0 32 140348.0 33 176281.0 34 272088.0 35 354269.0 36 234313.0 37 286318.0 38 403347.0 39 567647.0 40 100.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.671652499785054 24.52107506882492 29.06814828431009 14.739124147079934 2 30.458153097195577 25.471694073101176 30.64062108294206 13.429531746761187 3 27.752461538917668 25.79252016322303 33.03474336712895 13.420274930730356 4 25.038830860841067 27.636240731242346 32.41137422210627 14.913554185810321 5 23.43750051472509 31.712863449445432 30.477292634967508 14.37234340086197 6 22.045387387868168 40.570615176368705 26.83847448989508 10.54552294586805 7 87.67762956989407 3.8558756569127492 6.872872950035265 1.5936218231579182 8 89.07418992153448 2.74495890599588 6.411909865624632 1.768941306845004 9 84.03620897476316 5.444490234388512 8.056131224096974 2.4631695667513616 10 43.35606029909728 31.9168428261817 15.359429648362877 9.36766722635814 11 37.24830766625785 21.102411021738366 25.927155775742595 15.722125536261188 12 33.860609480626735 21.192936752886826 28.456374866130297 16.49007890035614 13 23.377084142481174 31.45667035951036 27.93581896962084 17.230426528387625 14 17.562189497236297 34.56518165595545 29.97732574208534 17.89530310472292 15 16.304250789217686 26.28141840775517 41.96780143371939 15.446529369307758 16 20.728053522185558 23.91381476024023 38.72620281782751 16.631928899746708 17 20.206015217414937 23.04584825212536 29.71928787742526 27.028848653034444 18 22.61450039053222 25.75578938075195 33.03408451901287 18.595625709702954 19 26.459735650370387 26.95324583171504 27.573880757056017 19.01313776085856 20 28.125336630209308 26.058760686928224 27.428703574679282 18.38719910818319 21 23.823651395555608 27.30444481998787 30.33965926351981 18.53224452093671 22 22.60003867438441 23.843153299791375 30.04769072088196 23.50911730494225 23 19.30378860726426 28.41127671258509 29.36568409352876 22.919250586621892 24 20.318381763611228 25.810342004762816 35.631790871066386 18.239485360559573 25 19.11654397267625 27.055532001735404 32.860609810050796 20.96731421553755 26 18.44998733364497 32.4377940315608 28.467015263204882 20.64520337158935 27 18.215437404322902 31.952255912420636 30.694185434778813 19.13812124847765 28 16.53184987091518 28.760795638161934 35.962796164581576 18.744558326341306 29 17.7583615237971 26.271140377144427 34.8770144692929 21.093483629765572 30 19.425181372650755 29.152810267225505 31.87517068284007 19.546837677283673 31 25.887031925473735 27.064558220925612 27.510236029043345 19.53817382455731 32 26.436972447960056 26.93825703707437 28.007040450968358 18.61773006399721 33 24.79525471232879 27.613312816803 27.73039012702921 19.861042343838996 34 19.674785981425096 28.19777698057156 29.974888004055867 22.152549033947476 35 19.97110292162903 27.564689825836798 30.930448369202672 21.533758883331505 36 25.427221825266233 26.749991187906446 28.04953615445508 19.773250832372238 37 20.199262024225188 30.863838824667667 29.473537530129946 19.463361620977196 38 20.245513161973527 32.17702194721902 26.160980972136983 21.41648391867047 39 20.14339170398218 30.446656197570103 28.570092050964536 20.83986004748318 40 22.900934608995055 27.140259869462426 27.70479387771977 22.254011643822754 41 19.043148292545695 25.267451157118476 29.0754285559927 26.613971994343128 42 21.11792689487189 26.311890133123555 27.12672054067712 25.443462431327436 43 20.939115516169615 26.601882131413184 28.16569107731879 24.293311275098407 44 19.79996712347901 29.039883700130552 29.312284453721027 21.847864722669417 45 19.02305342500546 32.7337815477067 26.47314320953248 21.770021817755364 46 21.89556532627312 30.754338267776298 27.052468357995668 20.29762804795492 47 20.254605265975336 28.257303907858773 28.407488335917662 23.080602490248225 48 21.52703863254756 26.097270359312702 30.9531786292072 21.42251237893254 49 21.047957224944913 24.97732738920563 31.58017143886828 22.394543946981173 50 19.779707543909755 29.558265397856964 29.091932701300337 21.57009435693294 51 18.95792628873162 31.08705656639328 27.078855225044396 22.876161919830704 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1509.0 1 2816.5 2 4124.0 3 17410.5 4 30697.0 5 21935.5 6 13174.0 7 13167.5 8 13161.0 9 14085.5 10 15010.0 11 15600.0 12 16190.0 13 15733.0 14 15276.0 15 14330.0 16 13384.0 17 12660.5 18 11937.0 19 11470.0 20 11003.0 21 11842.0 22 12681.0 23 14291.0 24 15901.0 25 18743.0 26 24541.0 27 27497.0 28 35032.5 29 42568.0 30 52932.5 31 63297.0 32 72664.5 33 82032.0 34 89593.0 35 97154.0 36 104819.0 37 112484.0 38 127147.5 39 141811.0 40 173824.0 41 205837.0 42 238932.5 43 272028.0 44 274093.5 45 276159.0 46 274163.0 47 272167.0 48 262497.5 49 252828.0 50 239885.0 51 226942.0 52 201085.0 53 175228.0 54 160291.5 55 145355.0 56 130113.5 57 114872.0 58 104080.5 59 93289.0 60 86438.0 61 79587.0 62 68575.5 63 57564.0 64 48115.5 65 38667.0 66 31496.0 67 24325.0 68 20133.5 69 15942.0 70 12710.0 71 9478.0 72 7725.0 73 5972.0 74 4519.0 75 2436.5 76 1807.0 77 1486.5 78 1166.0 79 806.0 80 446.0 81 330.5 82 215.0 83 149.0 84 83.0 85 63.0 86 43.0 87 29.0 88 15.0 89 20.5 90 26.0 91 15.5 92 5.0 93 4.5 94 4.0 95 6.0 96 8.0 97 4.5 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3035601.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.024319621278295 #Duplication Level Percentage of deduplicated Percentage of total 1 81.18007772404674 17.06755900950573 2 7.9915549963187 3.360340130272557 3 2.4886833551900445 1.5696862288701228 4 1.1771126342673774 0.9899196901232883 5 0.7382186698967407 0.7760272633152006 6 0.4871520286265473 0.6145223972399187 7 0.34746467028798 0.51136457996656 8 0.2592816287452515 0.4360975867732628 9 0.21457047066833734 0.4060078340957319 >10 2.6829754907090506 13.814062382820294 >50 1.236326755138546 18.882687294879865 >100 1.192002445821393 40.13702404870737 >500 0.0037896250620450085 0.5241572257933182 >1k 4.7370313275562606E-4 0.10473849182202286 >5k 1.5790104425187534E-4 0.18258691125867693 >10k+ 1.5790104425187534E-4 0.6232189245562076 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 18773 0.6184277841521333 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 5500 0.18118323192013705 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.588481160732258E-5 0.0 0.0 0.04196862499386448 0.0 2 6.588481160732258E-5 0.0 0.0 0.15097504579817966 0.0 3 6.588481160732258E-5 0.0 0.0 0.22835675703098002 0.0 4 6.588481160732258E-5 0.0 0.0 0.33897735571967463 0.0 5 6.588481160732258E-5 0.0 0.0 0.6103239523244326 0.0 6 6.588481160732258E-5 0.0 0.0 0.9191260643279535 0.0 7 6.588481160732258E-5 0.0 0.0 1.114375703526254 0.0 8 6.588481160732258E-5 0.0 0.0 1.584694431185126 0.0 9 6.588481160732258E-5 0.0 0.0 1.7568185015092563 0.0 10 6.588481160732258E-5 0.0 0.0 2.0797858480083518 0.0 11 6.588481160732258E-5 0.0 0.0 2.420344439206602 0.0 12 6.588481160732258E-5 0.0 0.0 2.7001901765087046 0.0 13 6.588481160732258E-5 0.0 0.0 2.8189475494309035 0.0 14 6.588481160732258E-5 0.0 0.0 2.865857535295317 0.0 15 6.588481160732258E-5 0.0 0.0 2.940439142034806 0.0 16 6.588481160732258E-5 0.0 0.0 3.0978379569647 0.0 17 6.588481160732258E-5 0.0 0.0 3.2959206430621153 0.0 18 6.588481160732258E-5 0.0 0.0 3.5393979643569757 0.0 19 6.588481160732258E-5 0.0 0.0 3.679996152327002 0.0 20 6.588481160732258E-5 0.0 0.0 3.831695931052862 0.0 21 6.588481160732258E-5 0.0 0.0 4.025990240482857 0.0 22 6.588481160732258E-5 0.0 0.0 4.236558098379859 0.0 23 6.588481160732258E-5 0.0 0.0 4.458886395148769 0.0 24 6.588481160732258E-5 0.0 0.0 4.628243303385392 0.0 25 6.588481160732258E-5 0.0 0.0 4.777406516864371 0.0 26 6.588481160732258E-5 0.0 0.0 4.922122505559854 0.0 27 6.588481160732258E-5 0.0 0.0 5.064894892312923 0.0 28 6.588481160732258E-5 0.0 0.0 5.223216094605319 0.0 29 9.882721741098385E-5 0.0 0.0 5.4006438922638385 0.0 30 9.882721741098385E-5 0.0 0.0 5.601329028419743 0.0 31 9.882721741098385E-5 0.0 0.0 5.781392218542556 0.0 32 9.882721741098385E-5 0.0 0.0 5.953615116084097 0.0 33 9.882721741098385E-5 0.0 0.0 6.13440303913459 0.0 34 9.882721741098385E-5 0.0 0.0 6.327116113086008 0.0 35 9.882721741098385E-5 0.0 0.0 6.533829709503983 0.0 36 9.882721741098385E-5 0.0 0.0 6.7247309511362 0.0 37 9.882721741098385E-5 0.0 0.0 6.92735968923452 0.0 38 9.882721741098385E-5 0.0 0.0 7.145207818814133 0.0 39 9.882721741098385E-5 0.0 0.0 7.419058038259969 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTACTC 25 3.892324E-5 45.0 22 TAGGTCG 30 2.1666856E-6 44.999996 1 TCGATAG 60 0.0 44.999996 1 CGTTTTT 10960 0.0 42.290146 1 CGTTAGG 600 0.0 41.250004 2 CACGACG 565 0.0 41.017696 26 CGACGGT 570 0.0 40.657894 28 CGGTCTA 570 0.0 40.657894 31 TACGCGG 240 0.0 40.312496 2 TCGTTAG 135 0.0 40.0 1 TCACGAC 580 0.0 39.568966 25 CCGCGAA 35 6.251679E-6 38.571426 36 TAGGGAC 3540 0.0 37.944916 5 TACGGGA 950 0.0 37.42105 4 GGGCGAT 3325 0.0 37.150375 7 CGACAAT 570 0.0 37.105263 20 ATAGGGA 3735 0.0 37.048195 4 GCGATAT 250 0.0 36.9 9 CGAGGGA 2145 0.0 36.81818 4 GCGTAAG 165 0.0 36.81818 1 >>END_MODULE