SRR1548159_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1548159_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1627321
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	11614	0.7136883257820675	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	5877	0.361145711264096	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGGTAAC	35	1.2123382E-7	45.000004	19
TAGCGGA	35	1.2123382E-7	45.000004	3
ATGTCGA	35	1.2123382E-7	45.000004	12
GCGATAA	70	0.0	45.000004	9
ACTCGAA	35	1.2123382E-7	45.000004	34
AACTCCG	35	1.2123382E-7	45.000004	27
TACACGG	35	1.2123382E-7	45.000004	2
TCGTTGA	25	3.891524E-5	45.0	24
GCCCATA	20	7.034153E-4	45.0	26
ACCGGTC	20	7.034153E-4	45.0	15
GTCGCAA	25	3.891524E-5	45.0	32
CAAGTCG	20	7.034153E-4	45.0	1
CACGGAT	25	3.891524E-5	45.0	42
CAACGAC	20	7.034153E-4	45.0	18
CGTTGAT	25	3.891524E-5	45.0	25
CCGTGCA	20	7.034153E-4	45.0	16
TTCGTTA	25	3.891524E-5	45.0	21
TACGGAC	40	6.8175723E-9	45.0	25
TAACGAC	20	7.034153E-4	45.0	32
TTATCGG	110	0.0	45.0	2