##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548159_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1627321 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.10858275656739 31.0 31.0 33.0 30.0 34.0 2 31.474320677973186 31.0 31.0 34.0 30.0 34.0 3 31.532406943682286 31.0 31.0 34.0 30.0 34.0 4 35.33292448140226 37.0 35.0 37.0 33.0 37.0 5 35.17903535934213 37.0 35.0 37.0 32.0 37.0 6 35.23329324699921 37.0 35.0 37.0 32.0 37.0 7 35.75002903545152 37.0 35.0 37.0 35.0 37.0 8 35.76587532515097 37.0 35.0 37.0 35.0 37.0 9 37.527256146759 39.0 37.0 39.0 35.0 39.0 10 36.816918727159546 39.0 37.0 39.0 32.0 39.0 11 36.36123727279375 38.0 35.0 39.0 32.0 39.0 12 35.27285704541391 37.0 35.0 39.0 30.0 39.0 13 34.673438737655324 37.0 33.0 39.0 27.0 39.0 14 35.515598950668 37.0 33.0 40.0 27.0 41.0 15 36.000219378967024 37.0 34.0 40.0 30.0 41.0 16 36.2792036727849 37.0 35.0 40.0 31.0 41.0 17 36.19517231081022 37.0 34.0 40.0 31.0 41.0 18 36.11695479871519 37.0 35.0 40.0 31.0 41.0 19 35.988839939999544 37.0 35.0 40.0 30.0 41.0 20 35.81453566936087 36.0 34.0 40.0 30.0 41.0 21 35.59476526143275 36.0 34.0 40.0 30.0 41.0 22 35.5007327994907 36.0 34.0 40.0 30.0 41.0 23 35.5462671470472 35.0 34.0 40.0 30.0 41.0 24 35.349798226655956 35.0 34.0 40.0 29.0 41.0 25 35.27893820579959 35.0 34.0 40.0 29.0 41.0 26 35.162887961256565 35.0 34.0 40.0 29.0 41.0 27 35.12467116198955 35.0 34.0 40.0 29.0 41.0 28 35.17579875144486 36.0 34.0 40.0 29.0 41.0 29 35.329282298944094 36.0 34.0 40.0 29.0 41.0 30 35.27994845516035 36.0 34.0 40.0 29.0 41.0 31 35.042728509003446 35.0 34.0 40.0 29.0 41.0 32 34.80611999722243 35.0 34.0 40.0 27.0 41.0 33 34.67299260563835 35.0 33.0 40.0 27.0 41.0 34 34.552552938234065 35.0 34.0 40.0 26.0 41.0 35 34.40434001650566 35.0 33.0 40.0 25.0 41.0 36 34.16263724243711 35.0 33.0 40.0 24.0 41.0 37 34.05848508069398 35.0 33.0 40.0 23.0 41.0 38 34.04839426271768 35.0 33.0 40.0 24.0 41.0 39 34.067402804978244 35.0 33.0 40.0 23.0 41.0 40 33.91808499982486 35.0 33.0 40.0 23.0 41.0 41 33.90227373701931 35.0 33.0 40.0 23.0 41.0 42 33.8303745849774 35.0 33.0 40.0 23.0 41.0 43 33.69248845187889 35.0 33.0 40.0 23.0 41.0 44 33.560342427830776 35.0 33.0 39.0 23.0 41.0 45 33.45677527666638 35.0 32.0 39.0 23.0 41.0 46 33.36927748120991 35.0 32.0 39.0 23.0 41.0 47 33.34707903357727 35.0 32.0 39.0 23.0 41.0 48 33.28976274502695 35.0 32.0 39.0 23.0 41.0 49 33.244284932106204 35.0 32.0 39.0 23.0 41.0 50 33.05653033421187 35.0 32.0 39.0 22.0 40.0 51 32.663653944120426 35.0 31.0 38.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 3.0 12 4.0 13 4.0 14 11.0 15 71.0 16 154.0 17 486.0 18 1077.0 19 2080.0 20 3491.0 21 5647.0 22 8674.0 23 12425.0 24 17452.0 25 24272.0 26 31770.0 27 37449.0 28 41496.0 29 46663.0 30 54888.0 31 66337.0 32 81164.0 33 104549.0 34 175045.0 35 249142.0 36 107422.0 37 126085.0 38 175464.0 39 253956.0 40 39.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.771876599638304 24.537199483076787 30.96014861235122 14.73077530493369 2 29.101695363115205 25.863919902711263 32.194754446111126 12.839630288062404 3 28.139746245516406 24.970979911154593 33.00504325821396 13.884230585115045 4 24.698568997757665 27.922087897839454 32.79273112065782 14.586611983745062 5 22.443881692671575 32.27912624491419 31.445547620905774 13.831444441508467 6 21.519786200755718 39.88696759889414 28.297735972189876 10.295510228160271 7 87.4556402824028 3.8221715322299654 7.224266140484883 1.4979220448823558 8 88.70788246449224 2.928678484453897 6.571536900218211 1.7919021508356372 9 85.42457204202489 4.5123856940333225 7.97814321820956 2.084899045732219 10 53.76400845315706 27.254979195868543 11.57743309402386 7.403579256950533 11 45.90550973040967 19.455841840669418 23.420824778885052 11.217823650035855 12 41.86445083668188 21.086313026133137 24.19485768327208 12.854378453912904 13 20.990388497413846 42.29780110992238 24.309586123450753 12.402224269213018 14 13.050959214561846 45.34698439951306 27.687653511507566 13.914402874417526 15 10.935949330218193 25.76197320626969 51.704427092134864 11.59765037137725 16 13.730665308196723 20.721111569260152 49.719815574186036 15.828407548357085 17 14.847654519298898 20.379937332585275 29.13426422936839 35.63814391874744 18 20.422461210787546 24.09420145134242 36.288906736900714 19.194430600969323 19 26.333526083667575 26.528570577040423 28.157751297992224 18.98015204129978 20 30.14703306846037 25.184398161149524 27.003707320190667 17.66486145019944 21 20.315967163208732 28.53831542762614 30.046008132384454 21.099709276780672 22 20.70255346056494 24.376260123233216 29.445696331578098 25.475490084623747 23 16.52599579308569 30.394679353366666 27.015137148724804 26.06418770482283 24 18.399443010936377 24.74588602986135 39.813472572405814 17.04119838679646 25 14.968036423053595 25.92893473383555 37.74805339573446 21.354975447376393 26 15.459826303476696 37.25288372730395 28.27973091971406 19.00755904950529 27 16.226792378393693 36.19679215102614 31.50982504373753 16.066590426842644 28 12.631189544042018 30.873380236597452 41.30475794265544 15.190672276705088 29 13.487504923736621 25.009878198585284 41.20238109137656 20.300235786301535 30 16.834601163507383 31.47885389545148 34.12934510155034 17.557199839490796 31 28.07921731483831 28.23038601480593 26.675069024488714 17.015327645867043 32 27.751132075355756 29.245367078775487 28.407241103629833 14.596259742238932 33 25.326349257460574 31.182784466002712 26.273796011973054 17.21707026456366 34 17.379607342374367 31.686987386016654 29.10931524880463 21.824090022804352 35 17.599047760091587 29.440964628367727 31.59235332180928 21.367634289731406 36 27.51700494247908 25.39173279273112 30.012271703001435 17.078990561788363 37 17.67831915153802 32.49451091702252 32.85061767162102 16.976552259818437 38 17.074197407886953 33.19990339951368 25.846713709219017 23.879185483380354 39 17.793231943789824 32.66675720401814 30.605086519500457 18.934924332691583 40 22.05225643864978 28.52485772628756 26.80159599734779 22.62128983771487 41 16.00366491921385 24.943019846729687 31.082496938219318 27.970818295837148 42 22.370448116874297 25.07728960666027 27.13465874280489 25.41760353366054 43 22.0496140589349 26.739715151466736 27.743082034829026 23.46758875476934 44 17.749294699693547 31.888115497802833 29.4270153215008 20.935574481002824 45 15.684920184769938 39.94749652957223 23.688442538380567 20.679140747277273 46 22.845154705187237 33.895709574202016 25.74488991415953 17.514245806451218 47 20.043740601884938 30.952405825279712 26.85296877506036 22.150884797774996 48 22.983357309344623 25.4415693031676 30.70408358277193 20.870989804715848 49 20.828281574440446 24.00085785164697 32.53758785144419 22.6332727224684 50 18.412409106746612 32.711001701569636 29.350324859078203 19.526264332605553 51 16.24381421981281 36.48001838604676 24.82749254756744 22.448674846572988 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1786.0 1 2013.0 2 2240.0 3 9513.0 4 16786.0 5 11980.5 6 7175.0 7 7783.0 8 8391.0 9 9729.5 10 11068.0 11 11484.5 12 11901.0 13 11783.0 14 11665.0 15 10867.5 16 10070.0 17 9431.5 18 8793.0 19 8541.0 20 8289.0 21 7826.0 22 7363.0 23 8332.0 24 9301.0 25 10993.0 26 15000.5 27 17316.0 28 21306.0 29 25296.0 30 26089.0 31 26882.0 32 33072.5 33 39263.0 34 42256.5 35 45250.0 36 49570.5 37 53891.0 38 62752.5 39 71614.0 40 104821.5 41 138029.0 42 164198.5 43 190368.0 44 201110.0 45 211852.0 46 190795.0 47 169738.0 48 150033.5 49 130329.0 50 118509.0 51 106689.0 52 92799.5 53 78910.0 54 70810.0 55 62710.0 56 52273.5 57 41837.0 58 37508.0 59 33179.0 60 28277.0 61 23375.0 62 19222.0 63 15069.0 64 11563.0 65 8057.0 66 6326.0 67 4595.0 68 3634.5 69 2674.0 70 2122.5 71 1571.0 72 1088.0 73 605.0 74 450.5 75 244.5 76 193.0 77 146.0 78 99.0 79 65.0 80 31.0 81 45.5 82 60.0 83 41.0 84 22.0 85 11.5 86 1.0 87 1.5 88 2.0 89 2.0 90 2.0 91 2.0 92 2.0 93 1.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1627321.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.551857872844362 #Duplication Level Percentage of deduplicated Percentage of total 1 80.9213216259144 16.630835009385194 2 8.72029770392815 3.5843663804004473 3 2.8535262308021934 1.7593579659563985 4 1.3294391337076417 1.0928977650622713 5 0.7770296299208325 0.79847012585609 6 0.5192828988732846 0.6403337000065414 7 0.35521476789738926 0.511022639691378 8 0.2639983455715706 0.43405251814823753 9 0.20926502124652369 0.387070647697468 >10 1.7016956746967622 8.283665431305277 >50 0.9167139947008774 13.9543389181793 >100 1.4210868849639664 49.369595862718526 >500 0.009624292130970838 1.2500775708954652 >1k 9.02277387278516E-4 0.222768965857756 >5k 3.007591290928387E-4 0.36326670708824416 >10k+ 3.007591290928387E-4 0.7178797917513812 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11614 0.7136883257820675 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 5877 0.361145711264096 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.145069104374613E-5 0.0 0.0 0.07085264677343929 0.0 2 6.145069104374613E-5 0.0 0.0 0.28648312164594447 0.0 3 6.145069104374613E-5 0.0 0.0 0.41202688344831784 0.0 4 6.145069104374613E-5 0.0 0.0 0.6448021011220282 0.0 5 6.145069104374613E-5 0.0 0.0 1.0786439798908758 0.0 6 6.145069104374613E-5 0.0 0.0 1.5250217996326478 0.0 7 6.145069104374613E-5 0.0 0.0 1.7928239112012934 0.0 8 6.145069104374613E-5 0.0 0.0 2.439039378217328 0.0 9 6.145069104374613E-5 0.0 0.0 2.6254807748440534 0.0 10 6.145069104374613E-5 0.0 0.0 2.9842913598484873 0.0 11 6.145069104374613E-5 0.0 0.0 3.4959298134787176 0.0 12 6.145069104374613E-5 0.0 0.0 3.8972642766854233 0.0 13 6.145069104374613E-5 0.0 0.0 4.052488722261926 0.0 14 6.145069104374613E-5 0.0 0.0 4.114308117451935 0.0 15 6.145069104374613E-5 0.0 0.0 4.217606729096472 0.0 16 6.145069104374613E-5 0.0 0.0 4.45640411449247 0.0 17 6.145069104374613E-5 0.0 0.0 4.733178026953502 0.0 18 6.145069104374613E-5 0.0 0.0 5.1030497363458105 0.0 19 6.145069104374613E-5 0.0 0.0 5.279105966186143 0.0 20 6.145069104374613E-5 0.0 0.0 5.453011421839944 0.0 21 6.145069104374613E-5 0.0 0.0 5.6884904699195795 0.0 22 6.145069104374613E-5 0.0 0.0 5.94013104974372 0.0 23 6.145069104374613E-5 0.0 0.0 6.217642370497278 0.0 24 6.145069104374613E-5 0.0 0.0 6.41748001777154 0.0 25 6.145069104374613E-5 0.0 0.0 6.581922067004604 0.0 26 6.145069104374613E-5 0.0 0.0 6.745196553107838 0.0 27 6.145069104374613E-5 0.0 0.0 6.892555310230741 0.0 28 6.145069104374613E-5 0.0 0.0 7.0528801631638744 0.0 29 6.145069104374613E-5 0.0 0.0 7.229059294386295 0.0 30 6.145069104374613E-5 0.0 0.0 7.45962228718243 0.0 31 6.145069104374613E-5 0.0 0.0 7.681090577704092 0.0 32 6.145069104374613E-5 0.0 0.0 7.8613254545353985 0.0 33 6.145069104374613E-5 0.0 0.0 8.048319907381519 0.0 34 6.145069104374613E-5 0.0 0.0 8.245207921485681 0.0 35 6.145069104374613E-5 0.0 0.0 8.490396178750228 0.0 36 6.145069104374613E-5 0.0 0.0 8.714322496913638 0.0 37 6.145069104374613E-5 0.0 0.0 8.9338243653219 0.0 38 6.145069104374613E-5 0.0 0.0 9.139745631009493 0.0 39 6.145069104374613E-5 0.0 0.0 9.35359403584173 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGGTAAC 35 1.2123382E-7 45.000004 19 TAGCGGA 35 1.2123382E-7 45.000004 3 ATGTCGA 35 1.2123382E-7 45.000004 12 GCGATAA 70 0.0 45.000004 9 ACTCGAA 35 1.2123382E-7 45.000004 34 AACTCCG 35 1.2123382E-7 45.000004 27 TACACGG 35 1.2123382E-7 45.000004 2 TCGTTGA 25 3.891524E-5 45.0 24 GCCCATA 20 7.034153E-4 45.0 26 ACCGGTC 20 7.034153E-4 45.0 15 GTCGCAA 25 3.891524E-5 45.0 32 CAAGTCG 20 7.034153E-4 45.0 1 CACGGAT 25 3.891524E-5 45.0 42 CAACGAC 20 7.034153E-4 45.0 18 CGTTGAT 25 3.891524E-5 45.0 25 CCGTGCA 20 7.034153E-4 45.0 16 TTCGTTA 25 3.891524E-5 45.0 21 TACGGAC 40 6.8175723E-9 45.0 25 TAACGAC 20 7.034153E-4 45.0 32 TTATCGG 110 0.0 45.0 2 >>END_MODULE