SRR1548158_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1548158_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1573608
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	23193	1.4738740524959202	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TATCGCG	20	7.034082E-4	45.0	1
CGTTTTT	12465	0.0	43.03249	1
GCGTAAG	85	0.0	42.352943	1
TACGGGA	575	0.0	39.130436	4
AAGGGAT	2845	0.0	39.068542	5
ACGGGAT	755	0.0	39.039734	5
CGCAGTA	180	0.0	38.75	37
ATAGGGA	2315	0.0	38.39093	4
CGGTCTA	200	0.0	38.25	31
TTAGCGG	390	0.0	38.076923	2
AGGGATC	2090	0.0	37.894737	6
TAAGGGA	2130	0.0	37.71127	4
ACGGGCT	185	0.0	37.7027	5
ATATGCG	120	0.0	37.500004	1
TATTACG	30	1.1401133E-4	37.500004	1
CCGGTAA	30	1.1401133E-4	37.500004	20
AGTACGG	115	0.0	37.173916	2
AGGGATT	3295	0.0	37.078907	6
TAGGGAC	1915	0.0	37.010445	5
CGCGTAA	55	2.750312E-9	36.818184	31