##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548157_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3492690 Sequences flagged as poor quality 0 Sequence length 51 %GC 39 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.16512487509627 31.0 31.0 33.0 30.0 34.0 2 31.53773538447443 31.0 31.0 34.0 30.0 34.0 3 31.423213912485792 31.0 31.0 34.0 30.0 34.0 4 35.336030394910516 37.0 35.0 37.0 33.0 37.0 5 35.2473829627021 37.0 35.0 37.0 33.0 37.0 6 35.31524755990368 37.0 35.0 37.0 33.0 37.0 7 35.82045271696028 37.0 35.0 37.0 35.0 37.0 8 35.84484165499944 37.0 35.0 37.0 35.0 37.0 9 37.58091299256447 39.0 37.0 39.0 35.0 39.0 10 36.88660946147525 39.0 37.0 39.0 32.0 39.0 11 36.55396012815337 39.0 35.0 39.0 32.0 39.0 12 36.177754681921385 38.0 35.0 39.0 32.0 39.0 13 36.009066078008644 38.0 35.0 39.0 31.0 39.0 14 37.01521033930867 39.0 35.0 41.0 31.0 41.0 15 37.231044266739964 39.0 35.0 41.0 32.0 41.0 16 37.292835321772046 39.0 35.0 41.0 32.0 41.0 17 37.15371075016677 39.0 35.0 41.0 32.0 41.0 18 36.97410906779588 39.0 35.0 40.0 32.0 41.0 19 36.79916482711034 38.0 35.0 40.0 31.0 41.0 20 36.549368251977704 38.0 35.0 40.0 31.0 41.0 21 36.42287348719755 38.0 35.0 40.0 31.0 41.0 22 36.349575542060705 38.0 35.0 40.0 31.0 41.0 23 36.28196118178252 38.0 35.0 40.0 31.0 41.0 24 36.11746361686837 38.0 35.0 40.0 30.0 41.0 25 36.021415871434336 37.0 35.0 40.0 30.0 41.0 26 35.93490490137974 37.0 35.0 40.0 30.0 41.0 27 35.86020574399675 37.0 34.0 40.0 30.0 41.0 28 35.85342357896063 37.0 35.0 40.0 30.0 41.0 29 35.825236708668676 37.0 35.0 40.0 30.0 41.0 30 35.68308925212372 37.0 34.0 40.0 29.0 41.0 31 35.46126309520742 37.0 34.0 40.0 29.0 41.0 32 35.14810532855765 37.0 34.0 40.0 26.0 41.0 33 34.840005840770296 37.0 34.0 40.0 24.0 41.0 34 34.51345438616081 37.0 34.0 40.0 23.0 41.0 35 34.20145647051413 37.0 33.0 40.0 21.0 41.0 36 33.98265577534794 37.0 33.0 40.0 20.0 41.0 37 33.870065479615995 37.0 33.0 40.0 19.0 41.0 38 33.76265199602599 37.0 33.0 40.0 18.0 41.0 39 33.71390819110771 37.0 33.0 40.0 18.0 41.0 40 33.606371020617345 37.0 33.0 40.0 18.0 41.0 41 33.52689817876765 37.0 33.0 40.0 18.0 41.0 42 33.45609515874584 36.0 33.0 40.0 18.0 41.0 43 33.36427653184222 36.0 33.0 40.0 18.0 41.0 44 33.21653825561387 36.0 32.0 40.0 17.0 41.0 45 33.15935596918135 36.0 32.0 40.0 18.0 41.0 46 33.0486894055871 36.0 32.0 40.0 17.0 41.0 47 33.02872771416874 36.0 32.0 40.0 17.0 41.0 48 32.90111976728539 35.0 32.0 40.0 16.0 41.0 49 32.80695967864311 36.0 31.0 40.0 15.0 41.0 50 32.6805121553874 35.0 31.0 40.0 15.0 41.0 51 32.37114544949595 35.0 31.0 39.0 15.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 2.0 11 6.0 12 6.0 13 18.0 14 26.0 15 125.0 16 420.0 17 996.0 18 2438.0 19 4810.0 20 8135.0 21 12948.0 22 19490.0 23 29210.0 24 43173.0 25 63923.0 26 86105.0 27 94911.0 28 93787.0 29 95596.0 30 105083.0 31 122679.0 32 146483.0 33 182550.0 34 268280.0 35 362592.0 36 286656.0 37 330252.0 38 452990.0 39 678892.0 40 107.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.6897205305939 22.824270118447384 28.37240064248473 20.113608708473983 2 35.81468724679259 23.65809734044533 28.980728321150746 11.546487091611336 3 25.796305999100976 23.68163220898505 38.643452467868606 11.878609324045364 4 23.277559703265965 25.926950287600675 37.90336388285247 12.892126126280889 5 21.551325768963178 30.01434424469392 35.932247064583464 12.502082921759447 6 19.726543151553674 38.0173447972766 32.75346509423968 9.502646956930045 7 82.24365746745346 2.841992847919512 13.631384405715938 1.2829652789110972 8 83.5768132871798 1.941082661215281 13.186168826892738 1.2959352247121847 9 78.99389868554037 5.1663903753267535 14.112589436795133 1.7271215023377398 10 35.359708419584905 38.25423956892825 18.90620123744163 7.47985077404522 11 26.922572573002473 22.049852692337424 36.10787101059641 14.919703724063687 12 26.98550400980333 22.08243502858828 35.32689703351858 15.60516392808981 13 21.150545854341495 28.05479444210623 35.89411027030741 14.900549433244864 14 15.177642447511802 32.34137584497908 36.239460129584934 16.24152157792418 15 14.624859349097688 28.307779963294767 43.129049529159474 13.938311158448071 16 18.5333654003075 26.407153225737183 41.365852680884935 13.693628693070384 17 18.70727147270442 25.185086566514634 35.01109460043691 21.096547360344033 18 18.86256724759426 26.95068843785163 37.96076949285508 16.225974821699037 19 21.202826474722922 27.627702429932228 34.42859228846534 16.74087880687951 20 22.869163882279846 28.4236219074696 33.72463631183987 14.982577898410682 21 20.730296705404715 27.286618623467874 36.68324414706143 15.299840524065978 22 20.296476354901234 23.74579478854407 36.56697273448259 19.3907561220721 23 16.742424893133943 28.350755434922654 36.38098428431953 18.525835387623864 24 16.726448668504794 27.496771829163198 39.822429130555534 15.954350371776481 25 16.79115524137556 29.37936089375238 37.107530298995904 16.721953565876156 26 16.412450002719968 32.718134160203164 33.721429614423265 17.1479862226536 27 15.76933538332918 32.24886835075543 35.71633898227441 16.265457283640977 28 14.331160223209045 30.000286312269342 39.76370648411397 15.904846980407653 29 15.655039525408782 27.84993801339369 38.764390770437686 17.730631690759843 30 17.346114313036658 29.76868831760047 36.691346784283745 16.193850585079122 31 20.94233957207768 29.141864866335116 33.100847770629514 16.814947790957685 32 21.110004037002998 29.039966329677124 34.109125058336126 15.740904574983752 33 20.543306162298975 30.353710177542236 32.541193177751246 16.56179048240754 34 17.347259562114015 31.022621532400528 32.9679988776559 18.662120027829552 35 17.255525111017583 30.816934798106903 33.392542710632775 18.534997380242736 36 21.550638619516764 30.281903060391848 31.333155819726343 16.834302500365048 37 18.36509967961657 32.17666039642797 32.25562532031185 17.20261460364361 38 18.478622494409752 32.93180900681137 30.189538722302867 18.40002977647601 39 18.13521955856374 32.069751395056535 31.13794811449055 18.657080931889176 40 20.101698118069454 30.68609009101867 30.136828633517432 19.075383157394445 41 17.639011764571148 29.65284637342564 31.358351299428232 21.349790562574977 42 19.42136290366451 30.228162247436792 30.232256512888345 20.11821833601035 43 19.73959899103556 30.28516702026232 30.187792217459897 19.78744177124222 44 18.403436892481153 32.02019074123383 30.879808972453898 18.696563393831116 45 17.801522608648348 33.98357712823067 28.91567817355677 19.299222089564203 46 19.390813384525966 32.92193123351915 29.649353363739696 18.03790201821519 47 18.86465732716044 31.53958696592025 30.166805528117298 19.428950178802012 48 19.195462523155506 30.072036166965866 31.806229582356295 18.92627172752234 49 19.206141970801873 29.021499188304716 32.24523218493482 19.527126655958586 50 18.03357870294816 31.954653862781985 31.3343869624845 18.67738047178536 51 17.281579527527494 32.50073725409355 30.221262121745703 19.996421096633256 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2537.0 1 3595.5 2 4654.0 3 61005.5 4 117357.0 5 78346.0 6 39335.0 7 38937.5 8 38540.0 9 42405.0 10 46270.0 11 49030.0 12 51790.0 13 52626.0 14 53462.0 15 51385.0 16 49308.0 17 46031.5 18 42755.0 19 39437.0 20 36119.0 21 35561.0 22 35003.0 23 34224.5 24 33446.0 25 35586.0 26 44625.5 27 51525.0 28 60640.5 29 69756.0 30 78511.5 31 87267.0 32 98969.5 33 110672.0 34 124852.0 35 139032.0 36 148861.0 37 158690.0 38 170564.5 39 182439.0 40 208245.0 41 234051.0 42 260374.5 43 286698.0 44 296254.5 45 305811.0 46 295429.5 47 285048.0 48 263575.0 49 242102.0 50 218996.5 51 195891.0 52 173554.0 53 151217.0 54 135603.5 55 119990.0 56 107477.5 57 94965.0 58 80969.5 59 66974.0 60 57077.0 61 47180.0 62 39344.0 63 31508.0 64 25154.5 65 18801.0 66 14646.5 67 10492.0 68 8032.5 69 5573.0 70 4737.5 71 3902.0 72 2963.0 73 2024.0 74 1743.0 75 1131.5 76 801.0 77 527.5 78 254.0 79 189.5 80 125.0 81 87.0 82 49.0 83 45.0 84 41.0 85 28.5 86 16.0 87 15.5 88 15.0 89 12.5 90 10.0 91 7.0 92 4.0 93 2.5 94 1.0 95 0.5 96 0.0 97 1.0 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3492690.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.30588587126792 #Duplication Level Percentage of deduplicated Percentage of total 1 79.98245094338321 18.640618733907743 2 7.134518382324264 3.3255254232982465 3 2.733260319511438 1.911031591889966 4 1.5122822357210248 1.409803087634404 5 1.0612868952357801 1.2367115628518683 6 0.7999254413037886 1.1185782624329832 7 0.6022695632896611 0.9825497994037049 8 0.4931854221998527 0.919529853053028 9 0.3752549321945114 0.7871083760120098 >10 3.31614127661825 17.745808421246608 >50 1.1489517476713909 19.44279108971121 >100 0.836099089926746 28.868504846229925 >500 0.0027492146754882108 0.43176386242372805 >1k 0.0014995716411753872 0.6689791514248249 >5k 0.0 0.0 >10k+ 1.2496430343128225E-4 2.510695938479751 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 86207 2.4682121802965624 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTCT 3497 0.10012340058808541 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.72624538679356E-5 0.0 0.0 0.036275764525337206 0.0 2 5.72624538679356E-5 0.0 0.0 0.1151547947284185 0.0 3 5.72624538679356E-5 0.0 0.0 0.19612390449767944 0.0 4 5.72624538679356E-5 0.0 0.0 0.28450850204283806 0.0 5 5.72624538679356E-5 0.0 0.0 0.5240087153454787 0.0 6 5.72624538679356E-5 0.0 0.0 0.907838943622251 0.0 7 5.72624538679356E-5 0.0 0.0 1.2257028250431616 0.0 8 5.72624538679356E-5 0.0 0.0 1.6977744947304227 0.0 9 5.72624538679356E-5 0.0 0.0 1.9403668805419318 0.0 10 5.72624538679356E-5 0.0 0.0 2.2263355751584024 0.0 11 5.72624538679356E-5 0.0 0.0 2.5228405612865727 0.0 12 5.72624538679356E-5 0.0 0.0 2.7598784890728925 0.0 13 5.72624538679356E-5 0.0 0.0 2.8838803329239067 0.0 14 5.72624538679356E-5 0.0 0.0 2.9475848128519853 0.0 15 5.72624538679356E-5 0.0 0.0 3.0173877441169985 0.0 16 5.72624538679356E-5 0.0 0.0 3.1369231165663143 0.0 17 5.72624538679356E-5 0.0 0.0 3.2910736423787967 0.0 18 5.72624538679356E-5 0.0 0.0 3.4807555208163334 0.0 19 5.72624538679356E-5 0.0 0.0 3.5945073854249876 0.0 20 5.72624538679356E-5 0.0 0.0 3.7158178939442092 0.0 21 5.72624538679356E-5 0.0 0.0 3.853562726723528 0.0 22 5.72624538679356E-5 0.0 0.0 4.022257915818466 0.0 23 5.72624538679356E-5 0.0 0.0 4.195763151038311 0.0 24 5.72624538679356E-5 0.0 0.0 4.327180482665224 0.0 25 5.72624538679356E-5 0.0 0.0 4.443251476655529 0.0 26 5.72624538679356E-5 0.0 0.0 4.553911168755315 0.0 27 5.72624538679356E-5 0.0 0.0 4.680031723399443 0.0 28 5.72624538679356E-5 0.0 0.0 4.811735367295695 0.0 29 5.72624538679356E-5 0.0 0.0 4.959816072998176 0.0 30 5.72624538679356E-5 0.0 0.0 5.144258436906797 0.0 31 5.72624538679356E-5 0.0 0.0 5.297578657138194 0.0 32 5.72624538679356E-5 0.0 0.0 5.441994565793128 0.0 33 5.72624538679356E-5 0.0 0.0 5.590018009041741 0.0 34 5.72624538679356E-5 0.0 0.0 5.743080548230734 0.0 35 5.72624538679356E-5 0.0 0.0 5.921224042213881 0.0 36 5.72624538679356E-5 0.0 0.0 6.086912952480753 0.0 37 5.72624538679356E-5 0.0 0.0 6.262479636039843 0.0 38 5.72624538679356E-5 0.0 2.86312269339678E-5 6.450701321903748 0.0 39 5.72624538679356E-5 0.0 2.86312269339678E-5 6.689972485390917 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CACGCGA 25 3.8924445E-5 45.000004 44 CGCATCG 40 6.8212103E-9 45.0 21 CGACCGT 20 7.035266E-4 45.0 16 CGCTAGC 35 1.212884E-7 45.0 16 CGCTAAC 35 1.212884E-7 45.0 44 CGTTTTT 38625 0.0 44.341747 1 CGACGGT 430 0.0 43.953487 28 CGGTCTA 445 0.0 42.47191 31 CGAGGGA 2425 0.0 40.54639 4 CACGACG 495 0.0 39.545452 26 TAGCCCG 40 3.4609184E-7 39.375 1 ACGGGTA 155 0.0 39.193546 5 TACGGGA 1525 0.0 39.098362 4 CTCCGCG 35 6.2519484E-6 38.571426 1 CTATACG 35 6.2519484E-6 38.571426 1 GTTTTTT 45035 0.0 38.495056 2 TAGGGAT 7455 0.0 38.42052 5 TAGGGAC 4615 0.0 37.93066 5 AGGGATT 8640 0.0 37.916668 6 ACGGGAT 1830 0.0 37.868855 5 >>END_MODULE