SRR1548156_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1548156_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	824673
Sequences flagged as poor quality	0
Sequence length	51
%GC	42

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7994	0.9693539136118194	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGGGTCG	30	2.164752E-6	45.000004	6
GCCGAAT	20	7.0321263E-4	45.0	23
TCCGTCG	20	7.0321263E-4	45.0	35
ACGTCGG	20	7.0321263E-4	45.0	2
TATAGCG	55	1.8189894E-12	45.0	1
TTCGAAG	40	6.8102963E-9	45.0	1
CGTTTTT	4155	0.0	42.888084	1
CGCGAGG	80	0.0	42.1875	2
CGACGGT	75	0.0	42.0	28
TACGGGA	315	0.0	41.428574	4
ACGGGAT	475	0.0	41.210526	5
TGTAACG	55	6.002665E-11	40.909092	1
TACACGG	55	6.002665E-11	40.909092	2
GCGCGAG	50	1.0804797E-9	40.5	1
GTATGCG	45	1.9272193E-8	40.0	1
GCGATAA	45	1.9272193E-8	40.0	9
CGGTCTA	80	0.0	39.375	31
TAAGGGA	1300	0.0	38.942307	4
ACGGGAC	220	0.0	38.863636	5
GTACGGG	320	0.0	38.671875	3