##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548156_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 824673 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.263746963948133 31.0 31.0 33.0 30.0 34.0 2 31.666077342170777 31.0 31.0 34.0 30.0 34.0 3 31.70297439106167 31.0 31.0 34.0 30.0 34.0 4 35.537257797939304 37.0 35.0 37.0 33.0 37.0 5 35.416423236846605 37.0 35.0 37.0 33.0 37.0 6 35.46868031328781 37.0 35.0 37.0 33.0 37.0 7 35.87995969311473 37.0 35.0 37.0 35.0 37.0 8 35.89560346949639 37.0 35.0 37.0 35.0 37.0 9 37.658048705365644 39.0 37.0 39.0 35.0 39.0 10 37.009132104482624 39.0 37.0 39.0 33.0 39.0 11 36.63380030630323 39.0 35.0 39.0 32.0 39.0 12 36.192496904833796 38.0 35.0 39.0 32.0 39.0 13 36.018475201686 38.0 35.0 39.0 31.0 39.0 14 37.02708831257965 39.0 35.0 41.0 31.0 41.0 15 37.24598234694236 39.0 35.0 41.0 32.0 41.0 16 37.32926869195427 39.0 35.0 41.0 32.0 41.0 17 37.19631417543681 39.0 35.0 41.0 32.0 41.0 18 37.09494793693985 39.0 35.0 40.0 32.0 41.0 19 37.016373762691394 38.0 35.0 40.0 32.0 41.0 20 36.85699058899709 38.0 35.0 40.0 32.0 41.0 21 36.74051411892956 38.0 35.0 40.0 31.0 41.0 22 36.654140489624375 38.0 35.0 40.0 31.0 41.0 23 36.597565338018825 38.0 35.0 40.0 31.0 41.0 24 36.47178942441428 38.0 35.0 40.0 31.0 41.0 25 36.34723823867157 38.0 35.0 40.0 31.0 41.0 26 36.324785702939224 38.0 35.0 40.0 31.0 41.0 27 36.28766917311468 38.0 35.0 40.0 30.0 41.0 28 36.318306771289954 38.0 35.0 40.0 30.0 41.0 29 36.3309517833129 38.0 35.0 40.0 30.0 41.0 30 36.2603007495092 38.0 35.0 40.0 30.0 41.0 31 36.13707615018316 38.0 35.0 40.0 30.0 41.0 32 35.94014961081544 38.0 35.0 40.0 30.0 41.0 33 35.80096595862845 38.0 35.0 40.0 29.0 41.0 34 35.622021091996466 38.0 34.0 40.0 29.0 41.0 35 35.41949839512146 38.0 34.0 40.0 27.0 41.0 36 35.244125853520124 38.0 34.0 40.0 26.0 41.0 37 35.18555839708588 38.0 34.0 40.0 26.0 41.0 38 35.11993359792306 38.0 34.0 40.0 26.0 41.0 39 35.0740487441689 38.0 34.0 40.0 26.0 41.0 40 34.99589049235273 38.0 34.0 40.0 25.0 41.0 41 34.942646358011 38.0 34.0 40.0 25.0 41.0 42 34.89613337650196 38.0 34.0 40.0 25.0 41.0 43 34.80316198056684 38.0 34.0 40.0 24.0 41.0 44 34.683674620122154 37.0 34.0 40.0 24.0 41.0 45 34.59276828512635 37.0 34.0 40.0 24.0 41.0 46 34.489172071839384 37.0 33.0 40.0 23.0 41.0 47 34.465675485919874 37.0 33.0 40.0 23.0 41.0 48 34.36628578842765 37.0 33.0 40.0 23.0 41.0 49 34.27152337956984 37.0 33.0 40.0 24.0 41.0 50 34.14522240936711 36.0 33.0 40.0 23.0 41.0 51 33.78689977724504 36.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 1.0 12 3.0 13 5.0 14 8.0 15 21.0 16 70.0 17 139.0 18 319.0 19 600.0 20 1116.0 21 1959.0 22 2999.0 23 4305.0 24 6384.0 25 9473.0 26 13107.0 27 15273.0 28 16644.0 29 18507.0 30 21678.0 31 26670.0 32 33092.0 33 43310.0 34 67167.0 35 89749.0 36 65701.0 37 82649.0 38 120908.0 39 182793.0 40 22.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.111814015979665 24.249126623522294 29.67964271899286 15.959416641505179 2 32.13807169629659 24.518930533678194 30.296372016544737 13.04662575348047 3 27.61518808060892 24.597749653499022 34.38284022879372 13.40422203709834 4 25.217389195475054 27.79174290900757 33.786725162579586 13.204142732937783 5 22.966800174129627 31.860143353789926 31.790661268163262 13.382395203917188 6 21.315236463422472 39.908424308786635 28.661057170539113 10.115282057251783 7 87.57859175697519 3.136394667947174 7.881063160792218 1.4039504142854198 8 88.93015777162584 2.1893526282538653 7.456167474865795 1.4243221252544949 9 84.35864882201794 5.076193836829871 8.638696792546865 1.9264605486053261 10 42.643690286937975 36.181007502367606 13.113197594682982 8.062104616011437 11 30.253324651104137 23.677748634913478 30.838041259990323 15.230885453992068 12 29.809633636605053 22.74695545992169 30.44879606825978 16.994614835213472 13 22.32715270173754 29.94447496159084 30.99919604497783 16.729176291693797 14 16.712563646439254 33.56724422892468 32.20149077270627 17.518701351929796 15 15.70513403494476 28.034384537871375 40.673818592339025 15.58666283484484 16 19.994228015225428 25.515325468397776 38.92912706005895 15.561319456317838 17 19.698353165436483 25.051020222560943 31.687832631843165 23.56279398015941 18 21.042764829211094 27.043446311447084 33.904105021020456 18.009683838321372 19 24.560522776906726 27.21612081394686 30.206033179211637 18.017323229934775 20 26.13848155571966 27.357267668518308 29.84443530951056 16.65981546625147 21 23.137898294232986 27.35981413238944 32.03597062108254 17.46631695229503 22 21.984592680977794 24.14738932886126 32.273034281466714 21.594983708694233 23 18.588337437990575 28.753578691190327 31.863296118582756 20.794787752236342 24 19.52786134625482 26.793165290969878 36.18367522642308 17.49529813635223 25 18.82940268445796 28.51651503080615 33.43361550578229 19.220466778953597 26 18.787325400492076 33.13567923285957 29.634048889681118 18.442946476967233 27 17.8617464134269 31.885365472132595 32.87739504021594 17.375493074224572 28 16.903912217327353 29.033568456830768 36.6451914880201 17.417327837821777 29 17.412477430448188 26.92824913632434 36.633186729770465 19.026086703457008 30 18.9836456389381 29.214367391681307 33.636483794182666 18.165503175197927 31 23.854303463312124 27.45767110115161 30.469531559781878 18.21849387575439 32 23.81064979694982 28.61146175514416 30.571147594258573 17.006740853647447 33 22.880705443248413 28.45442981642421 30.53525457969401 18.129610160633366 34 20.0258769233381 28.50584413458425 31.363097858181366 20.105181083896284 35 19.547990536855213 28.459280223797794 32.28249257584521 19.710236663501775 36 23.46275432807913 28.08458625418802 30.83440345446013 17.618255963272716 37 19.940752273931604 31.194788722317817 31.038241824335223 17.82621717941536 38 19.892126940011373 31.70068621138318 28.3121916201937 20.094995228411747 39 19.661611329581543 31.02975361143144 30.06549262556189 19.243142433425128 40 21.299957680195668 28.86998846815647 29.314407043761587 20.515646807886277 41 18.201153669393808 28.271569458439888 30.25950892050546 23.26776795166084 42 20.679105536376234 28.537735563065603 28.59412154878358 22.189037351774584 43 21.13164854433212 28.482319658822348 28.64735476970872 21.738677027136816 44 19.616502541007165 30.62656349850183 30.166866139669906 19.5900678208211 45 18.54892787808016 32.67695195550237 28.533006415876354 20.241113750541125 46 20.552146123372538 31.53577236068114 28.878719201428932 19.03336231451739 47 19.54095744616351 29.483443740731175 30.053002826574897 20.922595986530418 48 20.77211209776481 27.576384821620202 31.605982007413846 20.045521073201137 49 20.289739084461356 26.927764095586976 31.997531142646846 20.78496567730482 50 18.945569941055425 30.086349377268323 30.653361999240914 20.31471868243534 51 18.487570224804255 31.535166059759444 29.20078625103526 20.77647746440104 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 668.0 1 921.0 2 1174.0 3 6951.5 4 12729.0 5 8892.5 6 5056.0 7 5027.5 8 4999.0 9 5305.0 10 5611.0 11 5742.0 12 5873.0 13 5946.0 14 6019.0 15 5646.5 16 5274.0 17 4928.5 18 4583.0 19 4470.0 20 4357.0 21 4515.5 22 4674.0 23 5181.5 24 5689.0 25 6937.0 26 9965.5 27 11746.0 28 13504.0 29 15262.0 30 18876.0 31 22490.0 32 23842.0 33 25194.0 34 29244.5 35 33295.0 36 35480.0 37 37665.0 38 41096.5 39 44528.0 40 51544.5 41 58561.0 42 65451.5 43 72342.0 44 74228.5 45 76115.0 46 74042.5 47 71970.0 48 66837.5 49 61705.0 50 56715.5 51 51726.0 52 47331.5 53 42937.0 54 38609.0 55 34281.0 56 29762.0 57 25243.0 58 23009.0 59 20775.0 60 18312.5 61 15850.0 62 13685.5 63 11521.0 64 9232.5 65 6944.0 66 5572.0 67 4200.0 68 3150.5 69 2101.0 70 1734.0 71 1367.0 72 1146.5 73 926.0 74 682.0 75 400.5 76 363.0 77 219.0 78 75.0 79 90.0 80 105.0 81 69.5 82 34.0 83 23.5 84 13.0 85 8.0 86 3.0 87 2.5 88 2.0 89 1.5 90 1.0 91 1.0 92 1.0 93 1.0 94 1.0 95 1.0 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 824673.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.800689422512686 #Duplication Level Percentage of deduplicated Percentage of total 1 76.43200807166575 20.484305102676966 2 5.954201057493261 3.19153386602147 3 2.549313252030851 2.0497005812512397 4 1.5139581788996959 1.623004918054546 5 1.1307106588091431 1.5151912596734274 6 0.9020405000288562 1.4505184372680853 7 0.7800811870848443 1.463469953358415 8 0.6893475241652589 1.477999111946493 9 0.611607410311159 1.4752350227030988 >10 8.82004089464674 53.64249356499651 >50 0.5994220916429124 9.862451304324143 >100 0.016360269367684237 0.6963091583787214 >500 4.544519268801177E-4 0.0941485008617722 >1k 0.0 0.0 >5k 4.544519268801177E-4 0.973639218485132 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7994 0.9693539136118194 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.2126018433973223E-4 0.0 0.0 0.02716228129210002 0.0 2 1.2126018433973223E-4 0.0 0.0 0.08961127622706212 0.0 3 1.2126018433973223E-4 0.0 0.0 0.15715319890429297 0.0 4 1.2126018433973223E-4 0.0 0.0 0.24215658812644528 0.0 5 1.2126018433973223E-4 0.0 0.0 0.4366579238073758 0.0 6 1.2126018433973223E-4 0.0 0.0 0.7464776947953916 0.0 7 1.2126018433973223E-4 0.0 0.0 0.9546814313067119 0.0 8 1.2126018433973223E-4 0.0 0.0 1.4385095668222434 0.0 9 1.2126018433973223E-4 0.0 0.0 1.657990500477159 0.0 10 1.2126018433973223E-4 0.0 0.0 1.9324022976379729 0.0 11 1.2126018433973223E-4 0.0 0.0 2.204025110558973 0.0 12 1.2126018433973223E-4 0.0 0.0 2.444484056104662 0.0 13 1.2126018433973223E-4 0.0 0.0 2.5548308238538184 0.0 14 1.2126018433973223E-4 0.0 0.0 2.6104892484657554 0.0 15 1.2126018433973223E-4 0.0 0.0 2.6724532026633585 0.0 16 1.2126018433973223E-4 0.0 0.0 2.7888629796295015 0.0 17 1.2126018433973223E-4 0.0 0.0 2.9401956896854875 0.0 18 1.2126018433973223E-4 0.0 0.0 3.116629257899798 0.0 19 1.2126018433973223E-4 0.0 0.0 3.228552408045371 0.0 20 1.2126018433973223E-4 0.0 0.0 3.343022022062078 0.0 21 1.2126018433973223E-4 0.0 0.0 3.4936271710120255 0.0 22 1.2126018433973223E-4 0.0 0.0 3.6696969586733164 0.0 23 1.2126018433973223E-4 0.0 0.0 3.8523147962889532 0.0 24 1.2126018433973223E-4 0.0 0.0 3.9881262027494535 0.0 25 1.2126018433973223E-4 0.0 0.0 4.101746995475782 0.0 26 1.2126018433973223E-4 0.0 0.0 4.213548885437016 0.0 27 1.2126018433973223E-4 0.0 0.0 4.32959488185014 0.0 28 1.2126018433973223E-4 0.0 0.0 4.4557054735634605 0.0 29 2.4252036867946446E-4 0.0 0.0 4.5997625725590625 0.0 30 2.4252036867946446E-4 0.0 0.0 4.776681181510732 0.0 31 2.4252036867946446E-4 0.0 0.0 4.934561941521063 0.0 32 2.4252036867946446E-4 0.0 0.0 5.080074162728742 0.0 33 2.4252036867946446E-4 0.0 0.0 5.2225548793279275 0.0 34 2.4252036867946446E-4 0.0 0.0 5.378859256941842 0.0 35 2.4252036867946446E-4 0.0 0.0 5.555535345524833 0.0 36 2.4252036867946446E-4 0.0 0.0 5.720570456411208 0.0 37 2.4252036867946446E-4 0.0 0.0 5.892517397804948 0.0 38 2.4252036867946446E-4 0.0 0.0 6.068708445650579 0.0 39 2.4252036867946446E-4 0.0 0.0 6.281883849719828 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGGGTCG 30 2.164752E-6 45.000004 6 GCCGAAT 20 7.0321263E-4 45.0 23 TCCGTCG 20 7.0321263E-4 45.0 35 ACGTCGG 20 7.0321263E-4 45.0 2 TATAGCG 55 1.8189894E-12 45.0 1 TTCGAAG 40 6.8102963E-9 45.0 1 CGTTTTT 4155 0.0 42.888084 1 CGCGAGG 80 0.0 42.1875 2 CGACGGT 75 0.0 42.0 28 TACGGGA 315 0.0 41.428574 4 ACGGGAT 475 0.0 41.210526 5 TGTAACG 55 6.002665E-11 40.909092 1 TACACGG 55 6.002665E-11 40.909092 2 GCGCGAG 50 1.0804797E-9 40.5 1 GTATGCG 45 1.9272193E-8 40.0 1 GCGATAA 45 1.9272193E-8 40.0 9 CGGTCTA 80 0.0 39.375 31 TAAGGGA 1300 0.0 38.942307 4 ACGGGAC 220 0.0 38.863636 5 GTACGGG 320 0.0 38.671875 3 >>END_MODULE