SRR1548155_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1548155_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	2280621
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	16736	0.733835214180699	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCGCACG	55	1.8189894E-12	45.0	1
GTCGAAC	20	7.034751E-4	45.0	36
ATAGGCG	40	6.8193913E-9	45.0	15
CGCATAT	20	7.034751E-4	45.0	11
TCAATCG	20	7.034751E-4	45.0	14
AACGCGC	20	7.034751E-4	45.0	27
CGTACTA	40	6.8193913E-9	45.0	31
CGTACCG	20	7.034751E-4	45.0	20
TAGTCGA	20	7.034751E-4	45.0	22
TCGCGAC	25	3.8920174E-5	45.0	25
TACGTCG	20	7.034751E-4	45.0	1
CGTAGTA	30	2.1664455E-6	44.999996	43
CGCACGG	120	0.0	44.999996	2
CGGTAAG	30	2.1664455E-6	44.999996	35
CGACGGT	620	0.0	43.548386	28
CACGACG	615	0.0	42.439026	26
CGGTCTA	610	0.0	42.418034	31
CGTTTTT	8180	0.0	41.396698	1
TGCGCGA	55	6.184564E-11	40.909092	16
ACAACGA	325	0.0	40.846153	13