##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548155_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2280621 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.112503129630042 31.0 31.0 33.0 30.0 34.0 2 31.49142273091408 31.0 31.0 34.0 30.0 34.0 3 31.583111792796785 31.0 31.0 34.0 30.0 34.0 4 35.40514140666073 37.0 35.0 37.0 33.0 37.0 5 35.245867244053265 37.0 35.0 37.0 33.0 37.0 6 35.302453586106594 37.0 35.0 37.0 32.0 37.0 7 35.7625690546566 37.0 35.0 37.0 35.0 37.0 8 35.75915156442039 37.0 35.0 37.0 35.0 37.0 9 37.474886883879435 39.0 37.0 39.0 35.0 39.0 10 36.742634571899494 39.0 37.0 39.0 32.0 39.0 11 36.39502705622723 38.0 35.0 39.0 32.0 39.0 12 36.05816398252932 38.0 35.0 39.0 31.0 39.0 13 35.94143788029664 38.0 35.0 39.0 31.0 39.0 14 36.901439564048566 39.0 35.0 41.0 31.0 41.0 15 37.11513443049064 39.0 35.0 41.0 31.0 41.0 16 37.16194624183501 39.0 35.0 41.0 32.0 41.0 17 37.002200277906766 39.0 35.0 41.0 31.0 41.0 18 36.92624596546292 38.0 35.0 40.0 31.0 41.0 19 36.884715610353496 38.0 35.0 40.0 31.0 41.0 20 36.77593865881266 38.0 35.0 40.0 31.0 41.0 21 36.646842680129666 38.0 35.0 40.0 31.0 41.0 22 36.57177847612558 38.0 35.0 40.0 30.0 41.0 23 36.49105046388681 38.0 35.0 40.0 30.0 41.0 24 36.362767421680324 38.0 35.0 40.0 30.0 41.0 25 36.26196417554692 38.0 35.0 40.0 30.0 41.0 26 36.22332864601352 38.0 35.0 40.0 30.0 41.0 27 36.23690608829788 38.0 35.0 40.0 30.0 41.0 28 36.22417797608634 38.0 35.0 40.0 30.0 41.0 29 36.22995403444939 38.0 35.0 40.0 30.0 41.0 30 36.10617985189122 38.0 35.0 40.0 30.0 41.0 31 36.02044574701364 38.0 35.0 40.0 30.0 41.0 32 35.882792011474066 38.0 34.0 40.0 29.0 41.0 33 35.75940412720921 38.0 34.0 40.0 29.0 41.0 34 35.60888459766002 38.0 34.0 40.0 27.0 41.0 35 35.46479401882207 38.0 34.0 40.0 27.0 41.0 36 35.32810098652955 38.0 34.0 40.0 26.0 41.0 37 35.27976152109447 38.0 34.0 40.0 26.0 41.0 38 35.16943981485745 38.0 34.0 40.0 26.0 41.0 39 35.145636210488284 38.0 34.0 40.0 25.0 41.0 40 35.037469619020435 38.0 34.0 40.0 25.0 41.0 41 34.97741360796029 38.0 34.0 40.0 25.0 41.0 42 34.931983437844345 38.0 34.0 40.0 25.0 41.0 43 34.84167382480474 38.0 33.0 40.0 24.0 41.0 44 34.70248980431207 38.0 33.0 40.0 24.0 41.0 45 34.61466898708729 37.0 33.0 40.0 24.0 41.0 46 34.49812266045082 37.0 33.0 40.0 23.0 41.0 47 34.45836989135854 37.0 33.0 40.0 23.0 41.0 48 34.33968248121893 37.0 33.0 40.0 23.0 41.0 49 34.2248712083244 37.0 33.0 40.0 24.0 41.0 50 34.09369246358777 37.0 33.0 40.0 23.0 41.0 51 33.743951318522456 36.0 32.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 4.0 12 6.0 13 9.0 14 37.0 15 87.0 16 193.0 17 524.0 18 1076.0 19 2182.0 20 3700.0 21 5815.0 22 9168.0 23 13578.0 24 19544.0 25 26789.0 26 35413.0 27 41670.0 28 47628.0 29 54469.0 30 65348.0 31 79230.0 32 97459.0 33 123245.0 34 178759.0 35 219186.0 36 184737.0 37 234277.0 38 339479.0 39 496920.0 40 88.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.75365744680944 23.95452817456298 28.242833859725046 14.048980518902527 2 32.204254893732895 24.98455464542333 28.657370075957385 14.153820384886398 3 29.98569249340421 24.90234019593786 31.731664314237218 13.380302996420712 4 27.419856258448906 27.5466199776289 30.174763803367593 14.858759960554604 5 23.34969291258828 32.22082932674916 29.52099450105914 14.908483259603415 6 22.25744654635733 41.41999043243047 25.934997529181747 10.387565492030461 7 87.85159831466956 3.505317192115656 6.999540914514073 1.6435435787007135 8 87.88141475501628 3.0647792859927185 6.984764237459886 2.0690417215311094 9 82.95674730698349 5.910100801492225 8.485583531853823 2.647568359670458 10 39.30907415129476 37.00991966661712 14.188240834404315 9.492765347683811 11 28.369641426611437 24.993631120646526 29.938775447564502 16.697952005177537 12 28.28369992208263 24.018896607546804 30.671909098442924 17.025494371927646 13 23.368240492392204 27.822992071019254 30.743819336926215 18.064948099662328 14 17.479274285381045 32.21249826253463 32.04324611586055 18.264981336223773 15 17.468794683553295 28.6663150080614 37.11945123718496 16.745439071200344 16 22.923580901868394 26.186376429928515 34.79508432133178 16.094958346871312 17 21.862027930112017 25.99195569978528 29.749967223839473 22.396049146263234 18 22.326901313282654 27.348822974093462 32.46396485869419 17.860310853929697 19 23.447780231787746 28.331800855994928 29.313507154411013 18.906911757806316 20 24.734885805225858 28.934969905126717 29.33218627733411 16.997958012313312 21 23.71231344445219 27.37885865297215 31.979623093885394 16.929204808690265 22 22.544561327813785 23.38722654926005 32.78221151168914 21.28600061123703 23 19.908612610337272 28.219989204694684 32.555255783402856 19.316142401565187 24 19.540730353706294 27.22907488793622 34.33827891613731 18.89191584222017 25 20.312800767861035 28.424319516482573 31.690447470228506 19.57243224542789 26 18.78944375238148 32.18369031943492 29.031785640840805 19.99508028734279 27 18.465847679206675 30.981386210159428 32.03408194522457 18.518684165409333 28 17.012646993954718 29.6915182312186 34.73922234338805 18.55661243143863 29 19.630486608691232 27.374430034626535 33.87309859902194 19.121984757660304 30 19.730590922384735 28.189953525815998 33.53932985796412 18.540125693835144 31 23.698106787581104 27.32290897961564 29.88168573384179 19.097298498961468 32 23.554374006027306 28.768874793312875 29.321662827799972 18.35508837285985 33 22.47927209299572 28.349997654147707 29.6281582954818 19.54257195737477 34 20.040944988229086 28.024296891066076 31.400701826388516 20.53405629431633 35 20.00086818458657 28.779091308902267 30.77407425433687 20.445966252174298 36 22.563459689268843 28.696350686940093 29.854850937529736 18.88533868626133 37 20.056335533172764 30.17432532630367 29.859893423764845 19.909445716758725 38 19.785532098494226 30.632577705809076 28.68183709612426 20.900053099572443 39 19.62544412245612 29.085323690345742 30.007835585132298 21.28139660206584 40 21.585524293602486 27.509568665727446 29.959471564981644 20.94543547568842 41 19.376082216203393 27.05986658896853 30.367342929842355 23.196708264985723 42 20.970647906863967 28.539858222826155 28.89072756937694 21.598766300932947 43 20.84940899868939 28.028681661705303 29.117332516012084 22.004576823593222 44 20.585665044740008 28.875337024433257 29.93202290078009 20.60697503004664 45 20.14047928173949 30.24641095561253 28.56748227785327 21.045627484794714 46 21.50892235053523 29.508804838682096 28.47983071277516 20.502442098007517 47 19.589620546333652 29.300440537906127 29.2366421251054 21.873296790654827 48 20.28701831650239 28.4852678283678 30.756579019486356 20.47113483564345 49 20.878480028027454 27.402931043781496 30.510593386625835 21.207995541565214 50 19.551736128010745 29.272071071870336 30.29144255007737 20.884750250041545 51 18.958125878872465 30.21992694095161 29.645478139506743 21.176469040669186 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1027.0 1 2301.5 2 3576.0 3 14613.0 4 25650.0 5 17851.5 6 10053.0 7 10002.0 8 9951.0 9 10463.0 10 10975.0 11 11184.5 12 11394.0 13 11345.5 14 11297.0 15 10927.5 16 10558.0 17 9904.0 18 9250.0 19 8973.5 20 8697.0 21 11360.5 22 14024.0 23 15472.0 24 16920.0 25 20366.5 26 28581.5 27 33350.0 28 39946.5 29 46543.0 30 53634.5 31 60726.0 32 67049.0 33 73372.0 34 83742.0 35 94112.0 36 98006.5 37 101901.0 38 114636.0 39 127371.0 40 138492.5 41 149614.0 42 163049.0 43 176484.0 44 179002.0 45 181520.0 46 182904.5 47 184289.0 48 182226.5 49 180164.0 50 175900.5 51 171637.0 52 156246.0 53 140855.0 54 125306.5 55 109758.0 56 97601.0 57 85444.0 58 76143.5 59 66843.0 60 58586.0 61 50329.0 62 40461.0 63 30593.0 64 25151.5 65 19710.0 66 15821.5 67 11933.0 68 9363.5 69 6794.0 70 5356.5 71 3919.0 72 3523.5 73 3128.0 74 2364.0 75 1190.5 76 781.0 77 538.5 78 296.0 79 242.5 80 189.0 81 123.5 82 58.0 83 50.0 84 42.0 85 42.5 86 43.0 87 31.0 88 19.0 89 14.0 90 9.0 91 6.5 92 4.0 93 4.0 94 4.0 95 3.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2280621.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.521286685195804 #Duplication Level Percentage of deduplicated Percentage of total 1 80.98422738230882 16.619005470914434 2 7.670585037395683 3.1482054919114035 3 2.536547648487349 1.5615966445580447 4 1.2660395503246065 1.039230422680305 5 0.7535147173092716 0.7731545767708917 6 0.49694317461656456 0.6118748011534704 7 0.37209455499925714 0.5345101325998078 8 0.27561564058320526 0.4524790060265474 9 0.2334080317073723 0.4310849819964833 >10 2.8484972334504857 14.169748162611082 >50 1.286045344956888 19.207392361785885 >100 1.272177969573547 39.90019579137995 >500 0.00258222857222088 0.3443950844347677 >1k 0.00150630000046218 0.4680840998856952 >5k 0.0 0.0 >10k+ 2.1518571435174E-4 0.739042971291226 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 16736 0.733835214180699 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.3847706392250184E-5 0.0 0.0 0.03428890639873964 0.0 2 4.3847706392250184E-5 0.0 0.0 0.11146086964909996 0.0 3 4.3847706392250184E-5 0.0 0.0 0.16162264576183416 0.0 4 4.3847706392250184E-5 0.0 0.0 0.23519909708802997 0.0 5 4.3847706392250184E-5 0.0 0.0 0.4376001097946568 0.0 6 8.769541278450037E-5 0.0 0.0 0.6325470124146011 0.0 7 8.769541278450037E-5 0.0 0.0 0.7722019572739179 0.0 8 8.769541278450037E-5 0.0 0.0 1.1087331038344381 0.0 9 8.769541278450037E-5 0.0 0.0 1.2210709276113831 0.0 10 1.3154311917675055E-4 0.0 0.0 1.4197887329810608 0.0 11 1.3154311917675055E-4 0.0 0.0 1.7138752997538829 0.0 12 1.3154311917675055E-4 0.0 0.0 1.9524945179405082 0.0 13 1.7539082556900073E-4 0.0 0.0 2.048126365582006 0.0 14 1.7539082556900073E-4 0.0 0.0 2.090921727020842 0.0 15 1.7539082556900073E-4 0.0 0.0 2.1577017838562393 0.0 16 1.7539082556900073E-4 0.0 0.0 2.3060385745812213 0.0 17 1.7539082556900073E-4 0.0 0.0 2.4905497230798104 0.0 18 1.7539082556900073E-4 0.0 0.0 2.7154007614592692 0.0 19 1.7539082556900073E-4 0.0 0.0 2.8542225998971333 0.0 20 1.7539082556900073E-4 0.0 0.0 3.002033218145409 0.0 21 1.7539082556900073E-4 0.0 0.0 3.176547089586564 0.0 22 1.7539082556900073E-4 0.0 0.0 3.3719763169768235 0.0 23 1.7539082556900073E-4 0.0 0.0 3.573631918674782 0.0 24 1.7539082556900073E-4 0.0 0.0 3.727449672698796 0.0 25 1.7539082556900073E-4 0.0 0.0 3.870524738656708 0.0 26 1.7539082556900073E-4 0.0 0.0 4.005444131225662 0.0 27 1.7539082556900073E-4 0.0 0.0 4.150097714613695 0.0 28 1.7539082556900073E-4 0.0 0.0 4.307510980561873 0.0 29 1.7539082556900073E-4 0.0 0.0 4.470098275864337 0.0 30 1.7539082556900073E-4 0.0 0.0 4.725291927067233 0.0 31 1.7539082556900073E-4 0.0 0.0 4.928438350782528 0.0 32 1.7539082556900073E-4 0.0 0.0 5.099312862593127 0.0 33 1.7539082556900073E-4 0.0 0.0 5.285534071641013 0.0 34 1.7539082556900073E-4 0.0 0.0 5.4746053816043965 0.0 35 1.7539082556900073E-4 0.0 0.0 5.689678381458384 0.0 36 1.7539082556900073E-4 0.0 0.0 5.884011416188836 0.0 37 1.7539082556900073E-4 0.0 0.0 6.087727860087231 0.0 38 1.7539082556900073E-4 0.0 0.0 6.320515333323687 0.0 39 1.7539082556900073E-4 0.0 0.0 6.653231729428081 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGCACG 55 1.8189894E-12 45.0 1 GTCGAAC 20 7.034751E-4 45.0 36 ATAGGCG 40 6.8193913E-9 45.0 15 CGCATAT 20 7.034751E-4 45.0 11 TCAATCG 20 7.034751E-4 45.0 14 AACGCGC 20 7.034751E-4 45.0 27 CGTACTA 40 6.8193913E-9 45.0 31 CGTACCG 20 7.034751E-4 45.0 20 TAGTCGA 20 7.034751E-4 45.0 22 TCGCGAC 25 3.8920174E-5 45.0 25 TACGTCG 20 7.034751E-4 45.0 1 CGTAGTA 30 2.1664455E-6 44.999996 43 CGCACGG 120 0.0 44.999996 2 CGGTAAG 30 2.1664455E-6 44.999996 35 CGACGGT 620 0.0 43.548386 28 CACGACG 615 0.0 42.439026 26 CGGTCTA 610 0.0 42.418034 31 CGTTTTT 8180 0.0 41.396698 1 TGCGCGA 55 6.184564E-11 40.909092 16 ACAACGA 325 0.0 40.846153 13 >>END_MODULE