##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548154_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3073550 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.160443135787606 31.0 31.0 33.0 30.0 34.0 2 31.54388671080672 31.0 31.0 34.0 30.0 34.0 3 31.640146410502513 31.0 31.0 34.0 30.0 34.0 4 35.44480551804916 37.0 35.0 37.0 33.0 37.0 5 35.29577426754079 37.0 35.0 37.0 33.0 37.0 6 35.331258642286606 37.0 35.0 37.0 33.0 37.0 7 35.76986644108604 37.0 35.0 37.0 35.0 37.0 8 35.76391957183062 37.0 35.0 37.0 35.0 37.0 9 37.48140326332742 39.0 37.0 39.0 35.0 39.0 10 36.81497063656033 39.0 37.0 39.0 32.0 39.0 11 36.4786891379675 39.0 35.0 39.0 32.0 39.0 12 35.76000683249012 37.0 35.0 39.0 31.0 39.0 13 35.4215594345301 37.0 35.0 39.0 30.0 39.0 14 36.31150396121748 38.0 35.0 40.0 30.0 41.0 15 36.62429438271705 38.0 35.0 40.0 31.0 41.0 16 36.77266125490068 38.0 35.0 40.0 31.0 41.0 17 36.63936848269916 38.0 35.0 40.0 31.0 41.0 18 36.572665484537424 38.0 35.0 40.0 31.0 41.0 19 36.50477070488523 38.0 35.0 40.0 31.0 41.0 20 36.381042117421224 38.0 35.0 40.0 31.0 41.0 21 36.23463226562119 38.0 34.0 40.0 30.0 41.0 22 36.131051390086384 38.0 34.0 40.0 30.0 41.0 23 36.12293211433033 38.0 34.0 40.0 30.0 41.0 24 35.97645458834247 37.0 34.0 40.0 30.0 41.0 25 35.87025296481268 37.0 34.0 40.0 30.0 41.0 26 35.78698085275984 37.0 34.0 40.0 30.0 41.0 27 35.79044525060598 37.0 34.0 40.0 30.0 41.0 28 35.82268549397277 37.0 34.0 40.0 30.0 41.0 29 35.87967659546778 37.0 34.0 40.0 30.0 41.0 30 35.81507832961884 37.0 34.0 40.0 30.0 41.0 31 35.654429893771045 37.0 34.0 40.0 29.0 41.0 32 35.50228855883262 37.0 34.0 40.0 29.0 41.0 33 35.39725398968619 37.0 34.0 40.0 29.0 41.0 34 35.25741276374225 37.0 34.0 40.0 27.0 41.0 35 35.117607652388934 37.0 34.0 40.0 27.0 41.0 36 34.96907257080574 37.0 34.0 40.0 26.0 41.0 37 34.90688975289161 37.0 34.0 40.0 26.0 41.0 38 34.83523059654146 37.0 34.0 40.0 26.0 41.0 39 34.81484797709489 37.0 34.0 40.0 26.0 41.0 40 34.67319906947992 37.0 34.0 40.0 25.0 41.0 41 34.64392965788746 37.0 34.0 40.0 25.0 41.0 42 34.60362219583218 37.0 33.0 40.0 24.0 41.0 43 34.49191325991118 36.0 33.0 40.0 24.0 41.0 44 34.379955751492574 36.0 33.0 40.0 24.0 41.0 45 34.289753216964094 36.0 33.0 40.0 24.0 41.0 46 34.16959314148135 36.0 33.0 40.0 23.0 41.0 47 34.15122545590604 36.0 33.0 40.0 23.0 41.0 48 34.06115176261977 36.0 33.0 40.0 23.0 41.0 49 33.98214442582681 36.0 33.0 40.0 24.0 41.0 50 33.83462478241773 35.0 33.0 40.0 24.0 41.0 51 33.45458834247043 35.0 32.0 39.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 5.0 11 5.0 12 15.0 13 25.0 14 72.0 15 134.0 16 294.0 17 759.0 18 1723.0 19 3191.0 20 5566.0 21 9036.0 22 13497.0 23 19038.0 24 26830.0 25 37320.0 26 48400.0 27 57992.0 28 66383.0 29 77321.0 30 92547.0 31 113629.0 32 140620.0 33 179609.0 34 287048.0 35 380009.0 36 232727.0 37 283455.0 38 404321.0 39 591861.0 40 117.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.894763384360104 23.561744562476612 29.63205413935026 13.911437913813018 2 31.6757495404337 25.286818174423715 29.408501569845946 13.628930715296644 3 28.915553675717003 25.277675651933436 31.92054790063607 13.886222771713491 4 26.019130972328412 27.183192074311464 31.404011647768865 15.393665305591252 5 23.905776707715834 31.634656992728278 29.704641212929673 14.754925086626214 6 22.665940036765303 39.94468936571717 27.23443575019115 10.154934847326382 7 86.27551203006296 4.2412194368076 7.285158855395227 2.198109677734216 8 86.71064404353272 3.583510923850271 7.088318068682793 2.6175269639342127 9 81.49338712563647 6.135153161653462 9.0187242764881 3.352735436221958 10 45.52998975126483 29.50806071155504 14.301312814172537 10.660636723007597 11 39.13861821021295 22.373249174407444 24.08007027704121 14.408062338338404 12 36.454295521465404 21.438076491353648 26.441834360918154 15.665793626262792 13 24.085145841128337 33.113468139447875 26.77831823136113 16.023067788062665 14 16.939109498788046 36.11572936832002 29.48971059524003 17.455450537651902 15 15.674350506743018 27.14697987668982 42.42390720827707 14.754762408290087 16 20.066145011468823 23.396593515641523 40.13824405003986 16.3990174228498 17 19.918823510273135 23.56538855720584 28.800344878072586 27.715443054448443 18 22.075092319955754 25.78074213856941 32.68276097672073 19.461404564754112 19 26.69239153421939 26.589416147451644 27.722731043906883 18.995461274422084 20 28.827544695872852 26.28019716614338 27.453661075954518 17.43859706202925 21 24.21597175904085 26.951928551674776 29.658180280132097 19.173919409152283 22 22.412714938751606 24.33170112736087 29.50578321484928 23.749800719038245 23 20.050690569536854 28.155650632005337 29.13282686144686 22.660831937010947 24 20.53849782824421 25.339135527321826 35.881960599306986 18.24040604512697 25 19.2095785004311 26.431488018740545 33.53949016609458 20.819443314733775 26 18.2454816092141 33.63732491744074 28.33622358510517 19.780969888239984 27 17.991020155845845 32.58782189975761 30.821005026760584 18.60015291763596 28 15.858242097899822 29.73447641977518 36.19030111760017 18.21698036472483 29 17.63189146101414 26.29386214637797 36.31452229506596 19.75972409754193 30 19.5424834474793 28.56000390428007 32.72736737648647 19.170145271754162 31 25.827658570708138 27.254022221860712 27.877600819898813 19.040718387532333 32 26.272030713669857 27.779343104878723 28.592572107172487 17.35605407427893 33 25.31213092352491 27.638658879796978 27.70525939060695 19.343950806071156 34 19.67900310715622 28.342502968879636 29.56922776593841 22.409266158025737 35 19.28444307071627 27.124302516633858 32.05579866929121 21.535455743358657 36 24.930389939971693 26.879862048770963 28.932667436677455 19.25708057457988 37 20.282637341185275 30.3369068341169 30.662523791706658 18.717932032991165 38 20.354476094418505 31.126677620341297 26.55147955946707 21.96736672577313 39 20.573018171170148 29.553350360332516 29.032779684729388 20.840851783767956 40 22.24867010460217 26.550893917457014 28.530819410779067 22.66961656716175 41 18.430934912397717 25.687299702298645 29.556799141058388 26.324966244245253 42 21.886873485057993 25.2100990711067 27.731906102064386 25.17112134177092 43 21.093230954433796 26.250849994306257 28.6197068536383 24.036212197621644 44 19.580354964129427 29.432122464251435 28.94945584096566 22.03806673065348 45 18.66961656716175 32.860828683444225 26.753135624928824 21.716419124465194 46 21.62131736916595 31.0312505083698 27.367929592816125 19.979502529648126 47 20.84319435180817 27.842755120300627 28.863399001155017 22.450651526736184 48 21.435929137316784 25.776154609490654 31.233231930503813 21.554684322688747 49 20.370320964357177 24.824551414488134 32.11742122301573 22.68770639813896 50 19.198191016902282 30.184021733825706 29.763303020936704 20.854484228335313 51 18.71493875160645 30.854419157000862 27.47165329993005 22.95898879146264 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1469.0 1 3147.0 2 4825.0 3 14810.0 4 24795.0 5 18162.5 6 11530.0 7 12098.0 8 12666.0 9 13723.5 10 14781.0 11 15101.0 12 15421.0 13 15508.5 14 15596.0 15 15216.0 16 14836.0 17 13584.0 18 12332.0 19 12530.0 20 12728.0 21 12931.5 22 13135.0 23 15261.0 24 17387.0 25 20760.0 26 29438.0 27 34743.0 28 39239.0 29 43735.0 30 53661.5 31 63588.0 32 73315.5 33 83043.0 34 92230.5 35 101418.0 36 102640.5 37 103863.0 38 120958.5 39 138054.0 40 177615.5 41 217177.0 42 245574.5 43 273972.0 44 287858.0 45 301744.0 46 292329.5 47 282915.0 48 271125.0 49 259335.0 50 241279.5 51 223224.0 52 202984.5 53 182745.0 54 162373.5 55 142002.0 56 124109.5 57 106217.0 58 98685.5 59 91154.0 60 81884.5 61 72615.0 62 66003.5 63 59392.0 64 49320.5 65 39249.0 66 30937.5 67 22626.0 68 19174.5 69 15723.0 70 11472.5 71 7222.0 72 6315.0 73 5408.0 74 4185.5 75 2532.5 76 2102.0 77 1514.5 78 927.0 79 713.5 80 500.0 81 302.5 82 105.0 83 80.0 84 55.0 85 43.0 86 31.0 87 20.5 88 10.0 89 12.0 90 14.0 91 13.0 92 12.0 93 13.5 94 15.0 95 15.0 96 15.0 97 9.0 98 3.0 99 1.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3073550.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.95018079677281 #Duplication Level Percentage of deduplicated Percentage of total 1 80.14217313543868 15.187086703628317 2 8.92591574145763 3.3829543415476495 3 2.991071824819679 1.7004405556939828 4 1.4255548289869697 1.0805808698006247 5 0.7910717423772236 0.7495476270633233 6 0.5292800952532248 0.6017972098309046 7 0.34088925469461523 0.4521939105698064 8 0.26404276227521634 0.40029264665557224 9 0.20506745228142317 0.34974587666398943 >10 1.917772833677491 8.588853488987258 >50 0.9123084441491378 12.73216523830455 >100 1.5465565813772737 53.01150261575748 >500 0.006912752676285916 0.8571848438397818 >1k 0.0010369129014428872 0.2677269847325673 >5k 1.7281881690714787E-4 0.17579919927148885 >10k+ 1.7281881690714787E-4 0.46212788765275314 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14111 0.45911080021473544 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 5368 0.1746514616648501 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.507133445039124E-5 0.0 0.0 0.05469245660555384 0.0 2 6.507133445039124E-5 0.0 0.0 0.22189325047583414 0.0 3 6.507133445039124E-5 0.0 0.0 0.3269509199459908 0.0 4 6.507133445039124E-5 0.0 0.0 0.49350100047176715 0.0 5 6.507133445039124E-5 0.0 0.0 0.8306681199264694 0.0 6 6.507133445039124E-5 0.0 0.0 1.1873241040490639 0.0 7 6.507133445039124E-5 0.0 0.0 1.4172536643295213 0.0 8 6.507133445039124E-5 0.0 0.0 1.9687982951310374 0.0 9 6.507133445039124E-5 0.0 0.0 2.1520717086105643 0.0 10 6.507133445039124E-5 0.0 0.0 2.4690341787184202 0.0 11 6.507133445039124E-5 0.0 0.0 2.883050544159034 0.0 12 6.507133445039124E-5 0.0 0.0 3.2308242911291503 0.0 13 6.507133445039124E-5 0.0 0.0 3.371931479884824 0.0 14 6.507133445039124E-5 0.0 0.0 3.4352133526378292 0.0 15 6.507133445039124E-5 0.0 0.0 3.5313887849555075 0.0 16 6.507133445039124E-5 0.0 0.0 3.740528053879065 0.0 17 6.507133445039124E-5 0.0 0.0 3.9801207073254057 0.0 18 6.507133445039124E-5 0.0 0.0 4.2640920108669125 0.0 19 9.760700167558686E-5 0.0 0.0 4.419514893201672 0.0 20 9.760700167558686E-5 0.0 0.0 4.593450570187568 0.0 21 9.760700167558686E-5 0.0 0.0 4.810300792243497 0.0 22 9.760700167558686E-5 0.0 0.0 5.041043744204584 0.0 23 9.760700167558686E-5 0.0 0.0 5.280831611654276 0.0 24 9.760700167558686E-5 0.0 0.0 5.464137560801028 0.0 25 9.760700167558686E-5 0.0 0.0 5.621545118836525 0.0 26 1.626783361259781E-4 0.0 0.0 5.775796717151177 0.0 27 1.626783361259781E-4 0.0 0.0 5.923996681361943 0.0 28 1.626783361259781E-4 0.0 0.0 6.092596508922907 0.0 29 1.626783361259781E-4 0.0 0.0 6.269427860291845 0.0 30 1.626783361259781E-4 0.0 0.0 6.4830895869597045 0.0 31 1.626783361259781E-4 0.0 0.0 6.68276097672073 0.0 32 1.626783361259781E-4 0.0 0.0 6.867042995884238 0.0 33 1.626783361259781E-4 0.0 0.0 7.0504140163654405 0.0 34 1.626783361259781E-4 0.0 0.0 7.247092124741748 0.0 35 1.626783361259781E-4 0.0 0.0 7.4695710172276355 0.0 36 1.626783361259781E-4 0.0 0.0 7.681866245872037 0.0 37 1.626783361259781E-4 0.0 0.0 7.9000178946169735 0.0 38 1.9521400335117373E-4 0.0 0.0 8.118625042703064 0.0 39 1.9521400335117373E-4 0.0 0.0 8.386914154642026 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAATCG 40 6.8212103E-9 45.000004 45 GTCGAAC 50 2.1827873E-11 45.0 19 TCGACTA 30 2.1666947E-6 44.999996 18 TAATGCG 130 0.0 43.26923 1 CGTTTTT 9220 0.0 41.729935 1 GCGATAC 215 0.0 40.81395 9 CGTAAGA 50 1.0822987E-9 40.5 20 GGGCGAT 3050 0.0 40.057377 7 GCGAACC 45 1.9301297E-8 40.0 38 TATTGCG 225 0.0 40.0 1 TAGGGCG 695 0.0 39.496403 5 TACGTAG 160 0.0 39.375004 1 CGGTCTA 345 0.0 39.130436 31 CGTTAGG 490 0.0 39.030613 2 GGCGATT 980 0.0 38.80102 8 CGTAAGG 540 0.0 38.750004 2 CTTGCGG 420 0.0 38.57143 2 CGACGTA 35 6.2517047E-6 38.571426 34 CGCATTA 35 6.2517047E-6 38.571426 28 TACGGGA 700 0.0 38.571426 4 >>END_MODULE