##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548153_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2309887 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.10847153994979 31.0 31.0 33.0 30.0 34.0 2 31.48862217069493 31.0 31.0 34.0 30.0 34.0 3 31.57884952813709 31.0 31.0 34.0 30.0 34.0 4 35.40657616584707 37.0 35.0 37.0 33.0 37.0 5 35.25894600038876 37.0 35.0 37.0 33.0 37.0 6 35.290775263032344 37.0 35.0 37.0 32.0 37.0 7 35.73072838628037 37.0 35.0 37.0 35.0 37.0 8 35.71578912734692 37.0 35.0 37.0 35.0 37.0 9 37.42103531471453 39.0 37.0 39.0 35.0 39.0 10 36.74576029043845 39.0 37.0 39.0 32.0 39.0 11 36.438108011344276 39.0 35.0 39.0 32.0 39.0 12 35.91100300577474 37.0 35.0 39.0 31.0 39.0 13 35.682306104151415 37.0 35.0 39.0 30.0 39.0 14 36.60778600857964 38.0 35.0 41.0 31.0 41.0 15 36.84380880969502 38.0 35.0 41.0 31.0 41.0 16 36.92176976622666 38.0 35.0 41.0 31.0 41.0 17 36.77964419904524 38.0 35.0 41.0 31.0 41.0 18 36.70347250752959 38.0 35.0 40.0 31.0 41.0 19 36.63210797757639 38.0 35.0 40.0 31.0 41.0 20 36.51814396115481 38.0 35.0 40.0 31.0 41.0 21 36.36575771888408 38.0 35.0 40.0 30.0 41.0 22 36.27896083228314 38.0 35.0 40.0 30.0 41.0 23 36.23238063160665 38.0 35.0 40.0 30.0 41.0 24 36.09158240208287 38.0 34.0 40.0 30.0 41.0 25 35.97778938969742 38.0 34.0 40.0 30.0 41.0 26 35.90497024313311 38.0 34.0 40.0 30.0 41.0 27 35.89733134131669 38.0 34.0 40.0 30.0 41.0 28 35.89279778621205 38.0 34.0 40.0 30.0 41.0 29 35.918021530923376 38.0 34.0 40.0 30.0 41.0 30 35.83043672699141 38.0 34.0 40.0 29.0 41.0 31 35.69850559789288 38.0 34.0 40.0 29.0 41.0 32 35.53582621141207 38.0 34.0 40.0 28.0 41.0 33 35.41413844053843 38.0 34.0 40.0 27.0 41.0 34 35.25996985999748 38.0 34.0 40.0 27.0 41.0 35 35.09694933128763 38.0 34.0 40.0 26.0 41.0 36 34.93275558501347 38.0 34.0 40.0 25.0 41.0 37 34.85861602753728 38.0 34.0 40.0 25.0 41.0 38 34.77134292716484 37.0 33.0 40.0 24.0 41.0 39 34.75633526661694 37.0 34.0 40.0 24.0 41.0 40 34.6367809334396 37.0 33.0 40.0 24.0 41.0 41 34.557736374117 37.0 33.0 40.0 24.0 41.0 42 34.51423467901244 37.0 33.0 40.0 24.0 41.0 43 34.412114099087965 37.0 33.0 40.0 23.0 41.0 44 34.28175880465148 37.0 33.0 40.0 23.0 41.0 45 34.19536583391309 37.0 33.0 40.0 23.0 41.0 46 34.068169135546455 36.0 33.0 40.0 23.0 41.0 47 34.04391037310483 36.0 33.0 40.0 23.0 41.0 48 33.93709649000146 36.0 33.0 40.0 23.0 41.0 49 33.81356836936179 36.0 33.0 40.0 23.0 41.0 50 33.659869508768175 36.0 32.0 40.0 23.0 41.0 51 33.30711588921882 35.0 32.0 39.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 3.0 11 3.0 12 6.0 13 17.0 14 46.0 15 128.0 16 281.0 17 715.0 18 1483.0 19 2799.0 20 4756.0 21 7416.0 22 10920.0 23 15405.0 24 21908.0 25 30000.0 26 39362.0 27 47144.0 28 52616.0 29 59307.0 30 70025.0 31 83957.0 32 102564.0 33 128931.0 34 193363.0 35 244312.0 36 183925.0 37 227690.0 38 322040.0 39 458695.0 40 69.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.79313057305401 23.78627179597963 26.892527643127128 14.528069987839231 2 32.30582275236841 25.21179607487293 28.491869948616532 13.990511224142132 3 28.90210646667997 24.869874586938668 31.91363906546078 14.314379880920583 4 26.387524584535953 27.552256885293524 30.430103290767036 15.630115239403485 5 23.962384307111126 31.658172023133602 29.46066192848395 14.918781741271324 6 22.81267438623621 39.772941273750625 27.266268869429545 10.148115470583626 7 85.87034777025889 4.237739768222428 7.870341709356345 2.021570752162335 8 86.22980258341642 3.691479280155263 7.790943885999618 2.2877742504287006 9 80.8049484671761 6.376978614105365 9.496958076304166 3.3211148424143695 10 41.16829091639548 34.44393600206417 14.791329619154531 9.596443462385823 11 34.00577604012664 22.69561238277024 26.84053375771196 16.458077819391164 12 32.235732743636376 21.872758277785884 29.419361206846915 16.472147771730825 13 24.85939788396575 28.992587083264247 28.64694246948011 17.501072563289892 14 18.43613994970317 32.45946663191749 30.82691923890649 18.27747417947285 15 18.428563821520275 26.222364990148865 39.15403653944976 16.195034648881094 16 22.21186577525221 24.992391402696324 36.40576357198426 16.38997925006721 17 22.445253815446385 24.701381496151107 28.844657768973114 24.008706919429393 18 23.639424785714628 25.387605540877107 32.51397146267328 18.458998210734983 19 25.32634713299828 27.211287824902257 28.1165702045165 19.345794837582964 20 27.319734688320253 27.34506060253164 28.642613253375597 16.69259145577251 21 25.354270576872374 26.435925220584384 30.236327577929135 17.973476624614104 22 23.487252839641073 23.56496226871704 31.146069050131025 21.801715841510863 23 20.656032091613138 27.439307637126838 30.065756463411415 21.83890380784861 24 21.39329759421132 25.30058829717644 34.64160800939613 18.66450609921611 25 20.409613110944388 26.734294794507264 32.27924136548671 20.57685072906164 26 19.91478371019881 31.43738200180355 28.354763674586682 20.29307061341096 27 19.32371583544996 30.41421506766348 31.366426149850618 18.895642947035938 28 17.567179693205773 28.3112117605753 35.21479622163336 18.906812324585577 29 19.53632363834248 26.071535101067717 34.269078963602986 20.12306229698682 30 20.851323030087617 27.95452764572466 31.978187677579033 19.215961646608687 31 25.15270227504636 27.171155991613443 28.2966223023031 19.379519431037103 32 24.829526292844626 27.781488878027368 28.897863834897553 18.491120994230453 33 24.296166868768907 28.48455357339991 27.897122240178852 19.322157317652337 34 20.23679080405232 28.504857596930066 30.02103566105182 21.237315937965796 35 20.415457552685478 28.676814060601235 30.323950911884435 20.583777474828853 36 24.496869327374025 27.85690382256794 28.572869581931933 19.073357268126102 37 20.84894196123014 30.582231944679545 29.13817862085894 19.430647473231375 38 19.951105833315655 31.269668169914805 27.197694086334096 21.581531910435444 39 20.187177987494625 29.724657526537012 28.825306172985954 21.26285831298241 40 22.88964784857441 27.099031251312294 28.182114536338794 21.829206363774507 41 18.99737952549194 27.266831667523128 29.6021840029404 24.133604804044527 42 21.58707330704922 27.43662352314204 27.585721725781394 23.390581444027347 43 21.246147538819 27.473984658123968 28.286621813101682 22.99324598995535 44 19.79798145969911 29.130689076998138 29.24528342728454 21.826046036018212 45 19.80941059021502 31.69462402273358 27.021451698719464 21.47451368833194 46 21.278313614475515 30.07692584096105 28.063537307236242 20.581223237327194 47 20.519098986227466 28.9377359152201 28.70763807926535 21.835527019287092 48 21.401652981293022 27.05755736103108 30.466425413883886 21.07436424379201 49 21.453213945097747 26.24660860033413 30.53049781223064 21.769679642337483 50 19.81161849042832 29.522699595261585 29.519712436149476 21.14596947816062 51 19.25275998349703 30.253687734508222 27.935695555670037 22.557856726324708 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1364.0 1 2627.5 2 3891.0 3 14574.5 4 25258.0 5 18167.0 6 11076.0 7 11146.0 8 11216.0 9 11810.0 10 12404.0 11 12647.0 12 12890.0 13 12625.0 14 12360.0 15 11662.5 16 10965.0 17 10389.0 18 9813.0 19 9675.5 20 9538.0 21 10051.0 22 10564.0 23 12158.5 24 13753.0 25 16557.5 26 22792.0 27 26222.0 28 30128.0 29 34034.0 30 40644.0 31 47254.0 32 56174.0 33 65094.0 34 73047.5 35 81001.0 36 86336.5 37 91672.0 38 101855.0 39 112038.0 40 128417.0 41 144796.0 42 166420.5 43 188045.0 44 195300.5 45 202556.0 46 197335.5 47 192115.0 48 184296.0 49 176477.0 50 164823.0 51 153169.0 52 142946.5 53 132724.0 54 122176.5 55 111629.0 56 103838.0 57 96047.0 58 89356.5 59 82666.0 60 76040.5 61 69415.0 62 59236.0 63 49057.0 64 41746.5 65 34436.0 66 28078.5 67 21721.0 68 17721.0 69 13721.0 70 11006.0 71 8291.0 72 6637.5 73 4984.0 74 4055.0 75 2398.5 76 1671.0 77 1164.0 78 657.0 79 543.0 80 429.0 81 294.5 82 160.0 83 148.5 84 137.0 85 82.0 86 27.0 87 24.0 88 21.0 89 21.5 90 22.0 91 18.0 92 14.0 93 8.5 94 3.0 95 2.0 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2309887.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.68019043348874 #Duplication Level Percentage of deduplicated Percentage of total 1 81.74496508163409 17.722464099487148 2 6.721678056612955 2.9145452059994277 3 2.151433332227243 1.3993045304292562 4 1.0599906640107215 0.919231978138905 5 0.6478952276431009 0.7023245958125484 6 0.45268573928020095 0.5888587820471634 7 0.33857182446908934 0.5138211140932507 8 0.2767377684417049 0.47997820159638976 9 0.23871683832284307 0.46578838630676234 >10 3.7572633147881187 21.017832298937712 >50 1.7428661935427512 27.056635331832897 >100 0.8647798111338298 25.126166339555972 >500 0.0018121109199778704 0.26627794441502306 >1k 4.026913155506379E-4 0.165048673415279 >5k 0.0 0.0 >10k+ 2.0134565777531896E-4 0.6617225179323499 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15159 0.6562658692827831 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.039179405745822196 0.0 2 0.0 0.0 0.0 0.12143451173152627 0.0 3 0.0 0.0 0.0 0.17806065837852675 0.0 4 0.0 0.0 0.0 0.2533890185970136 0.0 5 0.0 0.0 0.0 0.43448012824869786 0.0 6 0.0 0.0 0.0 0.6315460453260268 0.0 7 0.0 0.0 0.0 0.7721156922394905 0.0 8 0.0 0.0 0.0 1.0739053468849342 0.0 9 0.0 0.0 0.0 1.1921795308601677 0.0 10 0.0 0.0 0.0 1.3923191913716992 0.0 11 0.0 0.0 0.0 1.6508599771330805 0.0 12 0.0 0.0 0.0 1.8644202075685954 0.0 13 0.0 0.0 0.0 1.9510911139809004 0.0 14 0.0 0.0 0.0 1.9937338926103312 0.0 15 0.0 0.0 0.0 2.0566374026088723 0.0 16 0.0 0.0 0.0 2.179110926205481 0.0 17 0.0 0.0 0.0 2.3313694566011236 0.0 18 0.0 0.0 0.0 2.5116813073539963 0.0 19 0.0 0.0 0.0 2.6191757432289977 0.0 20 0.0 0.0 0.0 2.7423419414023282 0.0 21 0.0 0.0 0.0 2.8911370989143625 0.0 22 0.0 0.0 0.0 3.0575954581328006 0.0 23 0.0 0.0 0.0 3.2298116747702377 0.0 24 0.0 0.0 0.0 3.368173421470401 0.0 25 0.0 0.0 0.0 3.4901707312955135 0.0 26 0.0 0.0 0.0 3.614072896206611 0.0 27 0.0 0.0 0.0 3.7392305337880165 0.0 28 0.0 0.0 0.0 3.874215491926661 0.0 29 0.0 0.0 0.0 4.021538715963162 0.0 30 0.0 0.0 0.0 4.205660276888004 0.0 31 4.32921610451074E-5 0.0 0.0 4.368049172968202 0.0 32 4.32921610451074E-5 0.0 0.0 4.519052230693536 0.0 33 4.32921610451074E-5 0.0 0.0 4.671267468928134 0.0 34 4.32921610451074E-5 0.0 0.0 4.843007471794075 0.0 35 4.32921610451074E-5 0.0 0.0 5.03461857657972 0.0 36 4.32921610451074E-5 0.0 0.0 5.207007961861338 0.0 37 4.32921610451074E-5 0.0 0.0 5.381908292483572 0.0 38 4.32921610451074E-5 0.0 0.0 5.579840052781803 0.0 39 4.32921610451074E-5 0.0 0.0 5.855178197028686 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACCGGAT 25 3.8920327E-5 45.000004 4 CGTTTTT 8745 0.0 41.68096 1 CGACGGT 345 0.0 41.086956 28 TAATGCG 160 0.0 40.781254 1 TACGGGA 970 0.0 40.360825 4 TCGAGTA 45 1.9297659E-8 40.000004 24 ACGGGAT 965 0.0 39.404144 5 ATTACGC 40 3.4602454E-7 39.375004 26 CGTATGG 230 0.0 39.130436 2 CGGTCTA 365 0.0 38.835617 31 TACGCTA 35 6.25103E-6 38.571426 28 TAGTAGG 1115 0.0 38.5426 2 TAAGGGA 3005 0.0 38.33611 4 CACGACG 365 0.0 38.219177 26 TAGGGCG 560 0.0 38.16964 5 CGGGATC 455 0.0 38.076923 6 TCGTCCC 355 0.0 38.02817 38 GTAGGGA 3355 0.0 37.824142 4 TCACGAC 365 0.0 37.60274 25 TCCCGTA 30 1.1402788E-4 37.500004 16 >>END_MODULE