SRR1548150_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1548150_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1389320
Sequences flagged as poor quality	0
Sequence length	51
%GC	41

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	24676	1.7761206921371606	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	2384	0.17159473699363717	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTATCG	30	2.1658307E-6	45.000004	30
ACCGCTC	35	1.2121745E-7	45.000004	18
CGTTGAT	30	2.1658307E-6	45.000004	25
CCAATCG	30	2.1658307E-6	45.000004	24
ATCGGTA	30	2.1658307E-6	45.000004	27
CGGACGG	75	0.0	45.000004	2
AGTCCGC	20	7.033795E-4	45.0	27
TAGCGTC	20	7.033795E-4	45.0	32
AAGCGTC	20	7.033795E-4	45.0	45
ATCGTCC	20	7.033795E-4	45.0	32
CGCAGAT	20	7.033795E-4	45.0	28
CCGACAA	25	3.8912272E-5	45.0	25
GGCGCGT	20	7.033795E-4	45.0	8
TATACGT	20	7.033795E-4	45.0	22
TATCGCC	25	3.8912272E-5	45.0	1
ATACCGG	25	3.8912272E-5	45.0	2
TCAACGT	25	3.8912272E-5	45.0	40
GTCGGTG	25	3.8912272E-5	45.0	16
TAGTACG	25	3.8912272E-5	45.0	1
CGTTTTT	10235	0.0	44.120667	1