##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548150_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1389320 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.106986871275158 31.0 31.0 33.0 30.0 34.0 2 31.47277661014021 31.0 31.0 34.0 30.0 34.0 3 31.44738505167996 31.0 31.0 34.0 30.0 34.0 4 35.317313505887775 37.0 35.0 37.0 33.0 37.0 5 35.18813160395013 37.0 35.0 37.0 32.0 37.0 6 35.25876687876083 37.0 35.0 37.0 32.0 37.0 7 35.77959577347191 37.0 35.0 37.0 35.0 37.0 8 35.79737785391414 37.0 35.0 37.0 35.0 37.0 9 37.53358621483891 39.0 37.0 39.0 35.0 39.0 10 36.813714622981024 39.0 37.0 39.0 32.0 39.0 11 36.427975556387295 39.0 35.0 39.0 32.0 39.0 12 35.820999481760865 37.0 35.0 39.0 31.0 39.0 13 35.51890853079204 37.0 35.0 39.0 30.0 39.0 14 36.40955503411741 38.0 35.0 41.0 30.0 41.0 15 36.73724699853165 38.0 35.0 41.0 31.0 41.0 16 36.871333458094604 38.0 35.0 41.0 31.0 41.0 17 36.74879293467308 38.0 35.0 40.0 31.0 41.0 18 36.64421299628595 38.0 35.0 40.0 31.0 41.0 19 36.50732804537471 38.0 35.0 40.0 31.0 41.0 20 36.29955445829614 38.0 35.0 40.0 31.0 41.0 21 36.14150735611666 38.0 34.0 40.0 30.0 41.0 22 36.06407163216537 37.0 34.0 40.0 30.0 41.0 23 36.03027812167103 37.0 34.0 40.0 30.0 41.0 24 35.86987375118763 37.0 34.0 40.0 30.0 41.0 25 35.764747502375265 37.0 34.0 40.0 30.0 41.0 26 35.689374658106125 37.0 34.0 40.0 30.0 41.0 27 35.62646618489621 37.0 34.0 40.0 30.0 41.0 28 35.624747358419945 37.0 34.0 40.0 29.0 41.0 29 35.64647885296404 37.0 34.0 40.0 30.0 41.0 30 35.533142832464804 37.0 34.0 40.0 29.0 41.0 31 35.313456942964905 36.0 34.0 40.0 29.0 41.0 32 35.06221748769182 36.0 34.0 40.0 27.0 41.0 33 34.84840209598941 36.0 34.0 40.0 26.0 41.0 34 34.61923746868972 36.0 34.0 40.0 24.0 41.0 35 34.37790429850575 36.0 33.0 40.0 24.0 41.0 36 34.15833069415253 36.0 33.0 40.0 23.0 41.0 37 34.04088906803328 36.0 33.0 40.0 23.0 41.0 38 33.973859154118564 36.0 33.0 40.0 23.0 41.0 39 33.967661877753144 36.0 33.0 40.0 23.0 41.0 40 33.82949932341001 36.0 33.0 40.0 22.0 41.0 41 33.77734071344255 36.0 33.0 40.0 21.0 41.0 42 33.72847292200501 36.0 33.0 40.0 21.0 41.0 43 33.627280252209715 35.0 33.0 40.0 21.0 41.0 44 33.4874190251346 35.0 33.0 40.0 21.0 41.0 45 33.390992715860996 35.0 32.0 40.0 20.0 41.0 46 33.29849062850891 35.0 32.0 40.0 20.0 41.0 47 33.25863731897619 35.0 32.0 40.0 20.0 41.0 48 33.1456237583854 35.0 32.0 39.0 20.0 41.0 49 33.05850272075548 35.0 32.0 39.0 20.0 41.0 50 32.9053256269254 35.0 32.0 39.0 19.0 41.0 51 32.59640039731667 35.0 31.0 39.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 2.0 12 3.0 13 5.0 14 18.0 15 58.0 16 131.0 17 365.0 18 882.0 19 1723.0 20 2943.0 21 4837.0 22 7174.0 23 10519.0 24 15412.0 25 21894.0 26 29636.0 27 34001.0 28 35523.0 29 38966.0 30 44244.0 31 52616.0 32 64474.0 33 81035.0 34 123961.0 35 167146.0 36 113169.0 37 127897.0 38 171500.0 39 239143.0 40 42.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.360392134281515 23.25886044971641 29.386174531425446 16.994572884576627 2 32.912575936429334 25.11581205193908 29.616359082140903 12.355252929490685 3 26.778783865488155 24.41626119252584 35.88914001094061 12.915814931045402 4 23.729450378602483 26.753231796850258 35.89784930757493 13.619468516972333 5 22.159041833414907 31.046843059914202 33.677698442403475 13.11641666426741 6 20.258831658653154 39.696470215645064 29.948248063800996 10.096450061900786 7 85.33282469121585 3.30384648605073 9.951702991391471 1.4116258313419514 8 86.95095442374688 2.166671465177209 9.484711945412144 1.397662165663778 9 82.44277776178274 5.4011314887858815 10.48124262229004 1.6748481271413354 10 41.88595859845104 35.65550053263467 14.993522010767856 7.465018858146431 11 33.75672991103561 21.749057092678434 30.396165030374572 14.09804796591138 12 32.522888895286904 22.39397690956727 30.071617769844238 15.011516425301586 13 21.43149166498719 33.457878674459444 30.507946333458097 14.60268332709527 14 15.197002850315261 37.47185673566925 31.5261422854346 15.804998128580888 15 14.014625860133014 28.37604007716005 43.99382431693202 13.615509745774911 16 17.893429879365446 25.330161517864852 41.97600264877782 14.80040595399188 17 17.815262142630928 24.650260559122447 31.26320790026776 26.27126939797887 18 20.469726196988454 27.35489304120001 34.744695246595455 17.430685515216076 19 23.445498517260244 28.727363026516567 29.92953387268592 17.89760458353727 20 25.58841735525293 28.334077102467393 29.379552586877033 16.69795295540264 21 21.45186134223937 28.65560130135606 32.492226412921426 17.400310943483145 22 20.97738461981401 25.657443929404312 31.816140270060174 21.549031180721503 23 16.665778942216335 30.953775947945754 31.3123686407739 21.068076469064003 24 17.602064319235307 28.594492269599513 37.67490570926784 16.12853770189733 25 16.59610456914174 29.61837445656868 35.2168686839605 18.568652290329084 26 16.101690035413007 35.50492327181643 29.98121383122679 18.412172861543777 27 16.655198226470503 33.68417643163562 33.36524342843981 16.29538191345406 28 14.18283764719431 30.73107707367633 38.60082630351539 16.48525897561397 29 15.55019721878329 28.47234618374457 37.786615034693234 18.190841562778914 30 18.26123571243486 31.199507672818356 33.78875996890565 16.75049664584113 31 24.802493306077793 29.292531598191925 29.464414245818098 16.440560849912185 32 25.01626695073849 30.1548239426482 29.510551924682577 15.318357181930727 33 23.12692540235511 30.3244752828722 28.985762819220913 17.56283649555178 34 18.57232315089396 31.00552788414476 30.41300780237814 20.009141162583134 35 18.54813865776063 30.540264301960672 31.44675092851179 19.464846111766906 36 24.62787550744249 28.637390953847923 29.788313707425214 16.94641983128437 37 18.5406529813146 33.34825670111997 31.2274350041747 16.883655313390726 38 18.678274263668555 34.19536175970978 26.978521866812542 20.147842109809115 39 18.41721129761322 32.80079463334581 29.474491117956987 19.307502951083983 40 20.922249733682666 30.41430340022457 28.330406241902512 20.33304062419025 41 17.147741341087727 29.327152851754818 29.552226988742696 23.972878818414763 42 20.34362133993608 29.832220078887513 27.65100912676705 22.17314945440935 43 20.67788558431463 29.58231364984309 28.295281144732677 21.44451962110961 44 19.190251345982208 32.74062131114502 28.802579679267552 19.266547663605216 45 16.815420493478825 36.56378660063916 26.76482019980998 19.855972706072038 46 20.669608153629113 33.70310655572511 27.624305415599 18.002979875046783 47 19.695606483747444 31.564362421904242 28.14477586157257 20.59525523277575 48 20.540120346644404 29.737209570149425 30.418046238447587 19.304623844758588 49 19.957461204042264 28.343578153341202 30.855022600984654 20.843938041631876 50 18.521722857225118 33.29823222871621 29.144041689459595 19.036003224599085 51 17.775818385972993 34.25035269052486 27.34956669449803 20.624262229004117 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1161.0 1 1548.5 2 1936.0 3 16917.5 4 31899.0 5 21108.0 6 10317.0 7 10662.5 8 11008.0 9 12643.5 10 14279.0 11 15807.5 12 17336.0 13 17988.0 14 18640.0 15 17581.0 16 16522.0 17 15388.5 18 14255.0 19 13319.0 20 12383.0 21 11171.0 22 9959.0 23 10146.0 24 10333.0 25 11732.0 26 15611.5 27 18092.0 28 20425.5 29 22759.0 30 26174.5 31 29590.0 32 33857.5 33 38125.0 34 42176.5 35 46228.0 36 49432.0 37 52636.0 38 60700.0 39 68764.0 40 81313.5 41 93863.0 42 109319.5 43 124776.0 44 125969.0 45 127162.0 46 121852.0 47 116542.0 48 113481.5 49 110421.0 50 103767.5 51 97114.0 52 88068.5 53 79023.0 54 68605.0 55 58187.0 56 49077.0 57 39967.0 58 35286.5 59 30606.0 60 25730.5 61 20855.0 62 16881.5 63 12908.0 64 10836.0 65 8764.0 66 6720.5 67 4677.0 68 3418.0 69 2159.0 70 1681.5 71 1204.0 72 989.5 73 775.0 74 619.0 75 384.5 76 306.0 77 212.5 78 119.0 79 76.5 80 34.0 81 25.5 82 17.0 83 14.0 84 11.0 85 8.5 86 6.0 87 5.5 88 5.0 89 3.5 90 2.0 91 1.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1389320.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.76853305715924 #Duplication Level Percentage of deduplicated Percentage of total 1 78.86471311793531 21.11092680140831 2 7.537185843535095 4.035188168212437 3 3.072761022091891 2.4675991498985157 4 1.6843512406778751 1.8035044746381153 5 1.0777137490699604 1.4424408059067126 6 0.7441841570532073 1.1952430925215778 7 0.5286201588064001 0.9905270336982921 8 0.4273014245285543 0.9150585846291073 9 0.34897650200353636 0.8407430127048113 >10 4.142946829616092 26.397836055553125 >50 1.1841762151694968 22.11578670845145 >100 0.38463873626422446 14.355989055280135 >500 0.0016206688322699973 0.2941362464927976 >1k 5.402229440899991E-4 0.2508256241601561 >5k 0.0 0.0 >10k+ 2.7011147204499957E-4 1.7841951864445118 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 24676 1.7761206921371606 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2384 0.17159473699363717 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.1593297440474478E-4 0.0 0.0 0.04491405867618691 0.0 2 2.1593297440474478E-4 0.0 0.0 0.1597184234013762 0.0 3 2.1593297440474478E-4 0.0 0.0 0.2590475916275588 0.0 4 2.1593297440474478E-4 0.0 0.0 0.36557452566723286 0.0 5 2.1593297440474478E-4 0.0 0.0 0.65564448795094 0.0 6 2.1593297440474478E-4 0.0 0.0 1.0566320214205511 0.0 7 2.1593297440474478E-4 0.0 0.0 1.3543316154665592 0.0 8 2.1593297440474478E-4 0.0 0.0 1.9132381308841735 0.0 9 2.1593297440474478E-4 0.0 0.0 2.170126392767685 0.0 10 2.1593297440474478E-4 0.0 0.0 2.489059395963493 0.0 11 2.1593297440474478E-4 0.0 0.0 2.876443152045605 0.0 12 2.1593297440474478E-4 0.0 0.0 3.1731350588777243 0.0 13 2.1593297440474478E-4 0.0 0.0 3.308525033829499 0.0 14 2.1593297440474478E-4 0.0 0.0 3.3811504908876286 0.0 15 2.1593297440474478E-4 0.0 0.0 3.4648605072985346 0.0 16 2.1593297440474478E-4 0.0 0.0 3.6236432211441567 0.0 17 2.1593297440474478E-4 0.0 0.0 3.8421673912417584 0.0 18 2.1593297440474478E-4 0.0 0.0 4.093513373448881 0.0 19 2.1593297440474478E-4 0.0 0.0 4.244090634267123 0.0 20 2.1593297440474478E-4 0.0 0.0 4.3930843866063976 0.0 21 2.1593297440474478E-4 0.0 0.0 4.591598767742493 0.0 22 2.1593297440474478E-4 0.0 0.0 4.812066334609737 0.0 23 2.1593297440474478E-4 0.0 0.0 5.038939913050989 0.0 24 2.1593297440474478E-4 0.0 0.0 5.2120461808654595 0.0 25 2.1593297440474478E-4 0.0 0.0 5.353338323784297 0.0 26 2.1593297440474478E-4 0.0 0.0 5.49866121555869 0.0 27 2.1593297440474478E-4 0.0 0.0 5.650606051881496 0.0 28 2.1593297440474478E-4 0.0 0.0 5.807301413641206 0.0 29 2.1593297440474478E-4 0.0 0.0 5.988253246192382 0.0 30 2.1593297440474478E-4 0.0 0.0 6.200011516425302 0.0 31 2.1593297440474478E-4 0.0 0.0 6.39593470186854 0.0 32 2.1593297440474478E-4 0.0 0.0 6.560187717732416 0.0 33 2.1593297440474478E-4 0.0 0.0 6.740347796044108 0.0 34 2.1593297440474478E-4 0.0 0.0 6.934039674085164 0.0 35 2.1593297440474478E-4 0.0 0.0 7.157818213226615 0.0 36 2.1593297440474478E-4 0.0 0.0 7.351366135951401 0.0 37 2.1593297440474478E-4 0.0 0.0 7.565139780612098 0.0 38 2.879106325396597E-4 0.0 0.0 7.780209023119224 0.0 39 2.879106325396597E-4 0.0 0.0 8.07567730976305 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTATCG 30 2.1658307E-6 45.000004 30 ACCGCTC 35 1.2121745E-7 45.000004 18 CGTTGAT 30 2.1658307E-6 45.000004 25 CCAATCG 30 2.1658307E-6 45.000004 24 ATCGGTA 30 2.1658307E-6 45.000004 27 CGGACGG 75 0.0 45.000004 2 AGTCCGC 20 7.033795E-4 45.0 27 TAGCGTC 20 7.033795E-4 45.0 32 AAGCGTC 20 7.033795E-4 45.0 45 ATCGTCC 20 7.033795E-4 45.0 32 CGCAGAT 20 7.033795E-4 45.0 28 CCGACAA 25 3.8912272E-5 45.0 25 GGCGCGT 20 7.033795E-4 45.0 8 TATACGT 20 7.033795E-4 45.0 22 TATCGCC 25 3.8912272E-5 45.0 1 ATACCGG 25 3.8912272E-5 45.0 2 TCAACGT 25 3.8912272E-5 45.0 40 GTCGGTG 25 3.8912272E-5 45.0 16 TAGTACG 25 3.8912272E-5 45.0 1 CGTTTTT 10235 0.0 44.120667 1 >>END_MODULE