##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548148_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1369661 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.137451529977124 31.0 31.0 33.0 30.0 34.0 2 31.522986344796266 31.0 31.0 34.0 30.0 34.0 3 31.641391556012763 31.0 31.0 34.0 30.0 34.0 4 35.43867497139803 37.0 35.0 37.0 33.0 37.0 5 35.291502057808465 37.0 35.0 37.0 33.0 37.0 6 35.337253524777296 37.0 35.0 37.0 33.0 37.0 7 35.76992190038265 37.0 35.0 37.0 35.0 37.0 8 35.77301463646844 37.0 35.0 37.0 35.0 37.0 9 37.49526050606683 39.0 37.0 39.0 35.0 39.0 10 36.78502198719245 39.0 37.0 39.0 32.0 39.0 11 36.44624180727932 39.0 35.0 39.0 32.0 39.0 12 35.88585788746266 37.0 35.0 39.0 31.0 39.0 13 35.634430709496726 37.0 35.0 39.0 30.0 39.0 14 36.57434576877052 38.0 35.0 41.0 31.0 41.0 15 36.83950116123625 38.0 35.0 41.0 31.0 41.0 16 36.93274394174909 38.0 35.0 41.0 32.0 41.0 17 36.805655560025436 38.0 35.0 41.0 31.0 41.0 18 36.74678186792206 38.0 35.0 40.0 31.0 41.0 19 36.70956389938824 38.0 35.0 40.0 31.0 41.0 20 36.59169531730844 38.0 35.0 40.0 31.0 41.0 21 36.450252288705016 38.0 35.0 40.0 31.0 41.0 22 36.37928290284968 38.0 35.0 40.0 30.0 41.0 23 36.327946842320834 38.0 35.0 40.0 30.0 41.0 24 36.196197453238426 38.0 34.0 40.0 30.0 41.0 25 36.09458909905444 38.0 34.0 40.0 30.0 41.0 26 36.0351050369398 38.0 34.0 40.0 30.0 41.0 27 36.0199224479634 38.0 34.0 40.0 30.0 41.0 28 36.054638337515634 38.0 35.0 40.0 30.0 41.0 29 36.087512165419035 38.0 35.0 40.0 30.0 41.0 30 36.034823215379575 38.0 35.0 40.0 30.0 41.0 31 35.904722409413715 38.0 34.0 40.0 30.0 41.0 32 35.780127345379626 38.0 34.0 40.0 29.0 41.0 33 35.680468378671804 38.0 34.0 40.0 29.0 41.0 34 35.57281108245033 38.0 34.0 40.0 28.0 41.0 35 35.42623685714933 38.0 34.0 40.0 27.0 41.0 36 35.28200554735807 38.0 34.0 40.0 27.0 41.0 37 35.2341155950268 38.0 34.0 40.0 27.0 41.0 38 35.172068854994045 38.0 34.0 40.0 27.0 41.0 39 35.1498903743335 38.0 34.0 40.0 27.0 41.0 40 35.041220418775154 37.0 34.0 40.0 26.0 41.0 41 35.00091482490923 37.0 34.0 40.0 26.0 41.0 42 34.9496254912712 37.0 34.0 40.0 26.0 41.0 43 34.86537617702483 37.0 33.0 40.0 26.0 41.0 44 34.75291112180313 37.0 33.0 40.0 25.0 41.0 45 34.681161980957334 37.0 33.0 40.0 25.0 41.0 46 34.58561936128721 37.0 33.0 40.0 24.0 41.0 47 34.5476690947614 37.0 33.0 40.0 24.0 41.0 48 34.451049566279536 37.0 33.0 40.0 24.0 41.0 49 34.35482867658494 36.0 33.0 40.0 24.0 41.0 50 34.22657139248325 36.0 33.0 40.0 24.0 41.0 51 33.85709383562794 36.0 32.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 5.0 12 5.0 13 3.0 14 19.0 15 60.0 16 138.0 17 323.0 18 617.0 19 1244.0 20 2233.0 21 3527.0 22 5346.0 23 7614.0 24 10830.0 25 15213.0 26 19956.0 27 24199.0 28 28054.0 29 32826.0 30 39742.0 31 48731.0 32 60157.0 33 76823.0 34 118706.0 35 151592.0 36 107607.0 37 134422.0 38 193431.0 39 286203.0 40 35.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.33493543292829 24.218547509201183 30.200246630370582 13.246270427499942 2 30.495283139404567 25.57421142895943 30.905822681670863 13.02468274996514 3 29.075880820144544 25.638752946897082 31.74508144716101 13.54028478579736 4 26.221378866741478 27.523014818995357 31.363162125518652 14.892444188744513 5 23.52049156689137 32.653992484271654 29.496714880543433 14.328801068293542 6 22.86872445079476 40.43664819250895 26.035493454219694 10.659133902476599 7 88.89871289319035 3.5730009104442635 5.911973838782005 1.6163123575833729 8 89.89786523818668 2.6829996619601495 5.682427987655339 1.736707112197836 9 84.92539394784548 5.712800466684822 7.064229761962997 2.2975758235066928 10 42.50248784188204 36.61416949157492 12.268291204903987 8.615051461639048 11 34.9265986254993 21.92257792256624 27.28857724648654 15.862246205447917 12 33.313352720125636 21.462902134177728 28.630515142068003 16.593230003628634 13 23.777270434070914 30.21557889141912 28.849766475062076 17.157384199447893 14 17.69744484219088 34.09062534451955 30.341887518152298 17.870042295137264 15 16.806640475270886 27.321505102357445 40.31092365191095 15.56093077046072 16 21.575922801335512 24.889735489292605 37.51300504285367 16.021336666518213 17 21.117926260585648 24.390560876012383 29.280237956691472 25.21127490671049 18 21.528830856686433 26.566427751100452 33.410311018565906 18.4944303736472 19 25.8001797525081 27.23951401113122 28.474272100906724 18.486034135453956 20 27.552292136521373 27.66589688981434 27.82119079100595 16.96062018265834 21 24.385669154630232 27.36837801470583 30.599177460700126 17.64677536996381 22 23.070818253567854 23.90401712540548 30.262086749933015 22.76307787109365 23 19.405020658396495 28.160617846313794 30.719937269149085 21.71442422614063 24 20.224055441455953 26.116243362408653 35.384522155482266 18.275179040653125 25 19.54578541697544 27.168766578007258 33.111916014254625 20.173531990762676 26 19.066688764592115 32.53396278349168 28.4549972584457 19.9443511934705 27 18.02037146417982 32.159563570839794 31.517871940575077 18.30219302440531 28 17.05582622269306 28.826841094256174 35.44147055366255 18.67586212938822 29 17.983501026896437 26.305049205606352 35.53930498130559 20.17214478619162 30 20.132353918232322 28.39615058032608 32.49979374458351 18.971701756858085 31 25.012466588447797 27.024132248782728 28.60021567380542 19.363185488964056 32 25.89750310478286 27.65005355339752 29.41910443533108 17.03333890648854 33 24.61944963023697 27.755919165399323 29.011631345274484 18.612999859089218 34 20.611815624450138 28.11586224620545 30.3453190241965 20.927003105147914 35 19.911204305298902 27.8063696053257 31.433617515575023 20.84880857380038 36 24.545927787970893 27.403496193583663 29.35062033598095 18.69995568246449 37 20.402712788054856 30.266321374413085 30.485207653572672 18.845758183959386 38 20.698333383224025 30.94532150656257 27.375387048328015 20.980958061885385 39 20.18243930432421 29.693405886566094 29.79934450933479 20.32481029977491 40 21.846646724992535 27.15956722137814 29.08172168149637 21.91206437213296 41 18.98542778103487 26.168300039206784 30.116722313039503 24.729549866718845 42 21.03045936184209 26.792396074649126 28.7000944029216 23.477050160587183 43 20.793539423258746 27.253313046074908 28.871596694364516 23.08155083630183 44 19.325292900944103 29.40618152959017 29.922367651557575 21.346157917908155 45 18.833784418188152 32.443429432538416 27.514691591569008 21.208094557704424 46 21.56015247568559 30.327139343238947 28.064024601708017 20.04868357936745 47 20.05656874219241 28.718347094646045 29.413993681648233 21.81109048151331 48 20.992201719987648 26.496702468713064 31.477716018781287 21.033379792518005 49 20.52339958573691 26.258541347092457 31.874821579938395 21.34323748723224 50 19.6066763965682 29.589730597571222 30.028525306626968 20.775067699233606 51 18.837800010367527 30.474110017004207 29.019370486565656 21.66871948606261 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 635.0 1 1181.5 2 1728.0 3 6391.0 4 11054.0 5 7892.5 6 4731.0 7 4852.0 8 4973.0 9 5088.0 10 5203.0 11 5406.0 12 5609.0 13 5659.0 14 5709.0 15 5435.5 16 5162.0 17 4983.5 18 4805.0 19 4998.0 20 5191.0 21 5857.5 22 6524.0 23 7786.5 24 9049.0 25 10801.0 26 15977.5 27 19402.0 28 22591.5 29 25781.0 30 30127.0 31 34473.0 32 39375.0 33 44277.0 34 48917.5 35 53558.0 36 56299.0 37 59040.0 38 65710.5 39 72381.0 40 84351.0 41 96321.0 42 108120.5 43 119920.0 44 122304.5 45 124689.0 46 122051.0 47 119413.0 48 111248.5 49 103084.0 50 98427.0 51 93770.0 52 83282.5 53 72795.0 54 67276.0 55 61757.0 56 54952.0 57 48147.0 58 44611.0 59 41075.0 60 37592.5 61 34110.0 62 29821.5 63 25533.0 64 20460.0 65 15387.0 66 12047.5 67 8708.0 68 7000.0 69 5292.0 70 4272.0 71 3252.0 72 2736.0 73 2220.0 74 1645.5 75 860.5 76 650.0 77 460.5 78 271.0 79 253.5 80 236.0 81 139.0 82 42.0 83 34.5 84 27.0 85 23.5 86 20.0 87 14.0 88 8.0 89 7.5 90 7.0 91 6.5 92 6.0 93 8.5 94 11.0 95 6.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1369661.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.291460797195104 #Duplication Level Percentage of deduplicated Percentage of total 1 80.2216221034098 17.8825714420556 2 6.160546412297114 2.7465515767804414 3 1.921222106649875 1.2848054181927087 4 1.0391848249226832 0.9265979114321621 5 0.6732305290537254 0.750364597293802 6 0.5371571253334173 0.7184410200782334 7 0.4303497467507647 0.6715187156144259 8 0.3643531769422213 0.6497571648112814 9 0.3475719195417723 0.6973097236804142 >10 5.993693188203155 34.22804156027779 >50 2.066220179721362 32.108677019025244 >100 0.24418960591657451 6.727927906178826 >500 0.0 0.0 >1k 3.295406287670891E-4 0.12583598658409986 >5k 3.295406287670891E-4 0.4815999579949555 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6556 0.47865858778194015 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 1713 0.12506744369592185 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.4602153379558884E-4 0.0 0.0 0.029642371360504533 0.0 2 1.4602153379558884E-4 0.0 0.0 0.1033102351603791 0.0 3 1.4602153379558884E-4 0.0 0.0 0.1543447612219374 0.0 4 1.4602153379558884E-4 0.0 0.0 0.2340725186743289 0.0 5 1.4602153379558884E-4 0.0 0.0 0.4388677198226422 0.0 6 1.4602153379558884E-4 0.0 0.0 0.6446850717075248 0.0 7 1.4602153379558884E-4 0.0 0.0 0.786618002556837 0.0 8 1.4602153379558884E-4 0.0 0.0 1.0934092450613693 0.0 9 1.4602153379558884E-4 0.0 0.0 1.1944561464479166 0.0 10 1.4602153379558884E-4 0.0 0.0 1.3966959707548072 0.0 11 1.4602153379558884E-4 0.0 0.0 1.6600458069551516 0.0 12 1.4602153379558884E-4 0.0 0.0 1.8830936998279135 0.0 13 1.4602153379558884E-4 0.0 0.0 1.971728770841836 0.0 14 1.4602153379558884E-4 0.0 0.0 2.0104974880645647 0.0 15 1.4602153379558884E-4 0.0 0.0 2.0707313707552455 0.0 16 1.4602153379558884E-4 0.0 0.0 2.2041950526444136 0.0 17 1.4602153379558884E-4 0.0 0.0 2.3684692781644507 0.0 18 1.4602153379558884E-4 0.0 0.0 2.566693510291963 0.0 19 1.4602153379558884E-4 0.0 0.0 2.6846789095987984 0.0 20 1.4602153379558884E-4 0.0 0.0 2.8228882913363234 0.0 21 1.4602153379558884E-4 0.0 0.0 2.9832199354438798 0.0 22 1.4602153379558884E-4 0.0 0.0 3.1630454543131474 0.0 23 1.4602153379558884E-4 0.0 0.0 3.345864414625225 0.0 24 1.4602153379558884E-4 0.0 0.0 3.4912288515187333 0.0 25 1.4602153379558884E-4 0.0 0.0 3.6189976935898738 0.0 26 1.4602153379558884E-4 0.0 0.0 3.7423858896471462 0.0 27 1.4602153379558884E-4 0.0 0.0 3.867818387177557 0.0 28 1.4602153379558884E-4 0.0 0.0 3.998945724525996 0.0 29 1.4602153379558884E-4 0.0 0.0 4.154458658018298 0.0 30 1.4602153379558884E-4 0.0 0.0 4.342315361246323 0.0 31 1.4602153379558884E-4 0.0 0.0 4.5111892650809216 0.0 32 1.4602153379558884E-4 0.0 0.0 4.658086928079284 0.0 33 1.4602153379558884E-4 0.0 0.0 4.81148254933155 0.0 34 1.4602153379558884E-4 0.0 0.0 4.974515591814325 0.0 35 1.4602153379558884E-4 0.0 0.0 5.171206597836983 0.0 36 1.4602153379558884E-4 0.0 0.0 5.347162546060668 0.0 37 1.4602153379558884E-4 0.0 0.0 5.530492581741029 0.0 38 1.4602153379558884E-4 0.0 0.0 5.72280294174982 0.0 39 2.1903230069338325E-4 0.0 0.0 5.981626110402501 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGCGTTA 20 7.0337614E-4 45.0 38 GTCGTTA 25 3.891199E-5 45.0 10 CGAATCC 20 7.0337614E-4 45.0 24 AAAGCGT 20 7.0337614E-4 45.0 5 GCCGATT 60 0.0 44.999996 9 CGTTTTT 3755 0.0 42.483356 1 TAGGGCG 340 0.0 42.35294 5 CCGGATA 70 0.0 41.785717 20 TAATGCG 70 0.0 41.785717 1 CGGTCTA 110 0.0 40.909092 31 TACGGGA 630 0.0 40.714283 4 CTAGCGG 150 0.0 40.5 2 AGGGCGA 975 0.0 40.153843 6 TTTCGCG 40 3.458863E-7 39.375 1 CGTTAGG 200 0.0 39.375 2 TGTAGCG 120 0.0 39.374996 1 CTACGGG 300 0.0 39.0 3 AATTCGC 35 6.2491654E-6 38.57143 13 CACGCCG 170 0.0 38.38235 26 AAGGGAT 2635 0.0 38.083492 5 >>END_MODULE