##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548144_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1783756 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.141477870291677 31.0 31.0 33.0 30.0 34.0 2 31.527748189774833 31.0 31.0 34.0 30.0 34.0 3 31.63210383034451 31.0 31.0 34.0 30.0 34.0 4 35.44766997279897 37.0 35.0 37.0 33.0 37.0 5 35.29979548772366 37.0 35.0 37.0 33.0 37.0 6 35.341326392174714 37.0 35.0 37.0 33.0 37.0 7 35.77397917652414 37.0 35.0 37.0 35.0 37.0 8 35.775084708895164 37.0 35.0 37.0 35.0 37.0 9 37.510880972509696 39.0 37.0 39.0 35.0 39.0 10 36.78179470734786 39.0 37.0 39.0 32.0 39.0 11 36.47888051953294 39.0 35.0 39.0 32.0 39.0 12 35.95716622677092 37.0 35.0 39.0 31.0 39.0 13 35.74854128030964 37.0 35.0 39.0 30.0 39.0 14 36.71209066710918 39.0 35.0 41.0 31.0 41.0 15 36.954873312269164 39.0 35.0 41.0 31.0 41.0 16 37.01710603916679 39.0 35.0 41.0 32.0 41.0 17 36.881349242833664 38.0 35.0 41.0 31.0 41.0 18 36.77834692637334 38.0 35.0 40.0 31.0 41.0 19 36.72074712012181 38.0 35.0 40.0 31.0 41.0 20 36.61729126629427 38.0 35.0 40.0 31.0 41.0 21 36.47956166650596 38.0 35.0 40.0 31.0 41.0 22 36.400833409950685 38.0 35.0 40.0 30.0 41.0 23 36.33096006404463 38.0 35.0 40.0 30.0 41.0 24 36.17895777225136 38.0 35.0 40.0 30.0 41.0 25 36.07791592572078 38.0 34.0 40.0 30.0 41.0 26 36.014537862801866 38.0 34.0 40.0 30.0 41.0 27 36.00854320882453 38.0 34.0 40.0 30.0 41.0 28 36.016685578072334 38.0 35.0 40.0 30.0 41.0 29 36.046346585519544 38.0 35.0 40.0 30.0 41.0 30 35.960915618503876 38.0 35.0 40.0 30.0 41.0 31 35.83890397565586 38.0 34.0 40.0 29.0 41.0 32 35.685046609513854 38.0 34.0 40.0 29.0 41.0 33 35.55371642758315 38.0 34.0 40.0 28.0 41.0 34 35.40701586988355 38.0 34.0 40.0 27.0 41.0 35 35.248448778868855 38.0 34.0 40.0 26.0 41.0 36 35.10106483173708 38.0 34.0 40.0 25.0 41.0 37 35.02824825816984 38.0 34.0 40.0 25.0 41.0 38 34.942923247349974 38.0 34.0 40.0 25.0 41.0 39 34.91392040166929 38.0 34.0 40.0 25.0 41.0 40 34.80660359376507 37.0 34.0 40.0 24.0 41.0 41 34.75560782977044 37.0 34.0 40.0 24.0 41.0 42 34.705801690365725 37.0 33.0 40.0 24.0 41.0 43 34.60784434642406 37.0 33.0 40.0 24.0 41.0 44 34.47797064172454 37.0 33.0 40.0 24.0 41.0 45 34.39809704914798 37.0 33.0 40.0 23.0 41.0 46 34.284264215509296 37.0 33.0 40.0 23.0 41.0 47 34.26028728144432 37.0 33.0 40.0 23.0 41.0 48 34.141659509484484 36.0 33.0 40.0 23.0 41.0 49 34.038674572082726 36.0 33.0 40.0 23.0 41.0 50 33.913670928086574 36.0 33.0 40.0 23.0 41.0 51 33.55674711115197 36.0 32.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 2.0 11 5.0 12 2.0 13 9.0 14 23.0 15 60.0 16 206.0 17 439.0 18 979.0 19 1938.0 20 3223.0 21 5172.0 22 7864.0 23 11184.0 24 15771.0 25 22386.0 26 29446.0 27 34875.0 28 39052.0 29 44215.0 30 51843.0 31 62924.0 32 77046.0 33 97021.0 34 147685.0 35 188057.0 36 140104.0 37 175146.0 38 253501.0 39 373522.0 40 55.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.761431496236035 23.351456140862314 29.899885410336392 13.98722695256526 2 30.96735203693779 25.608659480332513 30.230423892056983 13.193564590672716 3 28.6837998022151 25.37891953832251 32.830218931288805 13.107061728173584 4 25.5114488752946 27.502192003839088 32.29511211174623 14.691247009120081 5 23.92591811884585 31.999499931604998 30.39143246049348 13.68314948905568 6 21.90361237747764 41.099287122229725 27.000778133332137 9.996322366960504 7 88.47224620407724 3.434214096546837 6.6816313441973 1.4119083551786231 8 89.92244454959086 2.5340909855383806 6.258423237258907 1.2850412276118484 9 85.1126499364263 5.435048291358235 7.498222851107439 1.954078921108044 10 40.07067110075593 36.28265300859535 13.874319133334378 9.772356757314341 11 34.19228863140474 22.416687035670797 27.561448987417563 15.829575345506896 12 32.10052271723263 22.035468976698606 29.10493363442085 16.759074671647916 13 24.422062210302308 29.076118034080896 28.880463471461344 17.621356284155457 14 18.489524351985363 33.00894292717165 30.60665247937498 17.894880241468 15 18.468164928387065 27.508751196912584 38.531054695821624 15.492029178878724 16 22.673728918080723 25.428926377822975 35.85294177006272 16.044402934033577 17 22.866019791944638 24.10682851241986 29.38950170314774 23.63764999248776 18 23.38840065569506 26.765151735999765 32.018841141949906 17.827606466355263 19 25.82606589690518 27.418099784948165 28.80119253978683 17.95464177835982 20 27.420005875243024 27.36119738349864 27.836991157983494 17.381805583274843 21 24.953020480379603 27.171821706556276 30.813519337846657 17.061638475217464 22 23.807292028730387 23.83509852244365 30.714066273638323 21.643543175187638 23 20.75732331103581 26.836125568743707 30.99958738751264 21.406963732707837 24 20.821513704789222 25.783122803791546 35.10356797678607 18.291795514633165 25 20.231578758529754 27.701154193735018 32.64235691428649 19.424910133448744 26 20.0720838500333 31.8997104985211 28.23362612375235 19.794579527693248 27 18.862669557944024 31.166202103875197 31.758996185576947 18.212132152603832 28 17.239409425952875 29.379018206526002 34.92703037859438 18.45454198892674 29 18.719152171036846 26.808431197988963 34.79343587351633 19.678980757457857 30 20.36220200520699 28.73201267437923 32.973287826361904 17.932497494051876 31 25.194925763389165 26.899138671432638 29.312753538039953 18.59318202713824 32 24.88742854964468 27.47696433817181 29.802730866777743 17.832876245405764 33 23.739065208470215 28.24158685380736 29.067316381836978 18.952031555885444 34 20.491704022299015 28.653246296018064 30.4520349195742 20.403014762108718 35 20.055321467734377 28.543926411459864 31.46966289111291 19.93108922969285 36 24.736398924516582 28.387627007281264 29.123994537369462 17.751979530832692 37 21.275051072007606 30.664451864492676 29.60029286516766 18.460204198332058 38 21.049123310587323 31.377385696249938 26.853000074001155 20.720490919161588 39 21.01980315693402 29.96979407497438 28.94560691036218 20.06479585772942 40 21.925083924034453 28.562314576657343 28.18933755513646 21.323263944171735 41 19.69860227519907 27.35273210013029 29.562899858500824 23.385765766169815 42 21.84093564366427 27.608708814434262 27.58168718143064 22.968668360470826 43 21.606878967751193 27.617398343719657 28.2724206674007 22.503302021128448 44 19.70258264022658 29.85974539118579 29.26672706356699 21.17094490502064 45 20.0504441190387 31.7891011999399 27.64380330045141 20.51665138056999 46 22.03692657515938 30.321467734376228 28.0926315034119 19.54897418705249 47 20.717743906677818 29.18734400893396 28.63911880324439 21.455793281143833 48 21.33178528901935 27.903872502741407 30.46823668708052 20.296105521158722 49 21.12071381960313 26.72013436815349 31.021619548862063 21.137532263381313 50 20.20685564617582 30.005449175784133 29.43435088655623 20.353344291483815 51 19.399121852988863 30.744956148710923 28.257452252438114 21.598469745862104 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 775.0 1 1517.5 2 2260.0 3 10210.5 4 18161.0 5 13348.5 6 8536.0 7 8532.0 8 8528.0 9 8913.0 10 9298.0 11 9555.5 12 9813.0 13 9518.5 14 9224.0 15 8739.0 16 8254.0 17 7714.0 18 7174.0 19 7605.5 20 8037.0 21 8926.0 22 9815.0 23 10665.5 24 11516.0 25 13937.0 26 19114.0 27 21870.0 28 24943.5 29 28017.0 30 33814.5 31 39612.0 32 46982.0 33 54352.0 34 59738.5 35 65125.0 36 69951.0 37 74777.0 38 84695.5 39 94614.0 40 108839.5 41 123065.0 42 136826.5 43 150588.0 44 152118.0 45 153648.0 46 149691.5 47 145735.0 48 141296.5 49 136858.0 50 130518.5 51 124179.0 52 113507.0 53 102835.0 54 92811.0 55 82787.0 56 74446.0 57 66105.0 58 61771.0 59 57437.0 60 50711.5 61 43986.0 62 38785.0 63 33584.0 64 28523.0 65 23462.0 66 18331.0 67 13200.0 68 11276.0 69 9352.0 70 7178.5 71 5005.0 72 3951.0 73 2897.0 74 2205.5 75 1101.0 76 688.0 77 577.0 78 466.0 79 289.0 80 112.0 81 84.5 82 57.0 83 42.0 84 27.0 85 20.5 86 14.0 87 18.5 88 23.0 89 16.0 90 9.0 91 6.0 92 3.0 93 3.0 94 3.0 95 2.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1783756.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.571589515883726 #Duplication Level Percentage of deduplicated Percentage of total 1 81.16053571405443 17.507617613128033 2 5.797440598333599 2.501200176599435 3 1.7732801366375346 1.1475741361264533 4 0.9768423667197321 0.8428817022640969 5 0.6953807992521542 0.7500234579347309 6 0.49630994915336585 0.6423716697471321 7 0.41892162145651163 0.632576368017181 8 0.3791957702004255 0.6543884400738363 9 0.33182378865931794 0.6442169904507744 >10 5.467903336937123 29.93704194701494 >50 1.997778827426827 30.22289446860398 >100 0.5032832485582048 13.777219085698441 >500 7.823055665393293E-4 0.08702171280087549 >1k 2.6076852217977645E-4 0.08735922429202303 >5k 0.0 0.0 >10k+ 2.6076852217977645E-4 0.565613007248095 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10055 0.5636981739654976 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.6061479260616365E-5 0.0 0.0 0.01788361188413662 0.0 2 5.6061479260616365E-5 0.0 0.0 0.05701452440804684 0.0 3 5.6061479260616365E-5 0.0 0.0 0.09143627267406529 0.0 4 5.6061479260616365E-5 0.0 0.0 0.1305671851979755 0.0 5 5.6061479260616365E-5 0.0 0.0 0.23624307360423735 0.0 6 5.6061479260616365E-5 0.0 0.0 0.3586813443094235 0.0 7 5.6061479260616365E-5 0.0 0.0 0.4433341779929542 0.0 8 5.6061479260616365E-5 0.0 0.0 0.630691641681934 0.0 9 5.6061479260616365E-5 0.0 0.0 0.7040200565548203 0.0 10 5.6061479260616365E-5 0.0 0.0 0.829149278264516 0.0 11 5.6061479260616365E-5 0.0 0.0 0.9782728130977555 0.0 12 5.6061479260616365E-5 0.0 0.0 1.095833735107268 0.0 13 5.6061479260616365E-5 0.0 0.0 1.1484754641329868 0.0 14 5.6061479260616365E-5 0.0 0.0 1.1730864535283974 0.0 15 5.6061479260616365E-5 0.0 0.0 1.205882418895858 0.0 16 5.6061479260616365E-5 0.0 0.0 1.2744456080315918 0.0 17 5.6061479260616365E-5 0.0 0.0 1.370871352359852 0.0 18 5.6061479260616365E-5 0.0 0.0 1.4831624953188665 0.0 19 5.6061479260616365E-5 0.0 0.0 1.549595348242697 0.0 20 5.6061479260616365E-5 0.0 0.0 1.6223070868437164 0.0 21 5.6061479260616365E-5 0.0 0.0 1.7175555401075036 0.0 22 5.6061479260616365E-5 0.0 0.0 1.8258663180390142 0.0 23 5.6061479260616365E-5 0.0 0.0 1.945277268864127 0.0 24 5.6061479260616365E-5 0.0 0.0 2.0289770574002275 0.0 25 5.6061479260616365E-5 0.0 0.0 2.1088086038673453 0.0 26 5.6061479260616365E-5 0.0 0.0 2.1871825518736867 0.0 27 5.6061479260616365E-5 0.0 0.0 2.271330832243872 0.0 28 5.6061479260616365E-5 0.0 0.0 2.3577776332637423 0.0 29 5.6061479260616365E-5 0.0 0.0 2.453250332444572 0.0 30 5.6061479260616365E-5 0.0 0.0 2.5718764225600363 0.0 31 5.6061479260616365E-5 0.0 0.0 2.6800750775330258 0.0 32 5.6061479260616365E-5 0.0 0.0 2.7811539246399173 0.0 33 5.6061479260616365E-5 0.0 0.0 2.887278304880264 0.0 34 5.6061479260616365E-5 0.0 0.0 3.007249870497983 0.0 35 5.6061479260616365E-5 0.0 0.0 3.1408443755760316 0.0 36 5.6061479260616365E-5 0.0 0.0 3.260535633797448 0.0 37 5.6061479260616365E-5 0.0 0.0 3.3882436835531315 0.0 38 5.6061479260616365E-5 0.0 0.0 3.530695902354358 0.0 39 5.6061479260616365E-5 0.0 0.0 3.7113259885320637 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACGCTA 20 7.034334E-4 45.000004 19 ACTCGAT 20 7.034334E-4 45.000004 40 CAACGCG 50 2.1827873E-11 45.0 1 TAATACG 30 2.166178E-6 44.999996 1 TAACGCG 30 2.166178E-6 44.999996 1 TATAGCG 85 0.0 42.35294 1 TCGGACG 60 3.6379788E-12 41.249996 1 CGTTTTT 7170 0.0 41.23431 1 GCGATAT 95 0.0 40.263157 9 CGGTCTA 300 0.0 39.000004 31 GACCGAT 520 0.0 38.94231 9 AGGGCGA 1100 0.0 38.863636 6 GGCGATA 500 0.0 38.7 8 ATCGGTT 35 6.2502277E-6 38.57143 28 TAAGGGA 2485 0.0 38.48089 4 TATACGG 265 0.0 38.207546 2 GGGCGAT 2130 0.0 38.1338 7 ACGAGGG 675 0.0 37.666668 3 CGGGATA 460 0.0 37.66304 6 CGAACCG 30 1.14017465E-4 37.499996 19 >>END_MODULE