##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548142_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2558855 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.081072589107237 31.0 31.0 33.0 30.0 34.0 2 31.455925013336042 31.0 31.0 34.0 30.0 34.0 3 31.505986075803435 31.0 31.0 34.0 30.0 34.0 4 35.348828284525695 37.0 35.0 37.0 33.0 37.0 5 35.20784686900977 37.0 35.0 37.0 32.0 37.0 6 35.25960791056938 37.0 35.0 37.0 32.0 37.0 7 35.74243323674065 37.0 35.0 37.0 35.0 37.0 8 35.74157464959914 37.0 35.0 37.0 35.0 37.0 9 37.475735436357276 39.0 37.0 39.0 35.0 39.0 10 36.67310144576383 39.0 37.0 39.0 32.0 39.0 11 36.374903228201674 38.0 35.0 39.0 32.0 39.0 12 35.77998245308937 37.0 35.0 39.0 31.0 39.0 13 35.51737007372438 37.0 35.0 39.0 30.0 39.0 14 36.45269075426314 38.0 35.0 40.0 30.0 41.0 15 36.73936076878135 38.0 35.0 41.0 31.0 41.0 16 36.83912218550875 38.0 35.0 41.0 31.0 41.0 17 36.721442989149445 38.0 35.0 40.0 31.0 41.0 18 36.61096115254674 38.0 35.0 40.0 31.0 41.0 19 36.519496415388915 38.0 35.0 40.0 31.0 41.0 20 36.371292238129946 38.0 35.0 40.0 31.0 41.0 21 36.21822768386642 38.0 34.0 40.0 30.0 41.0 22 36.138981302183986 38.0 34.0 40.0 30.0 41.0 23 36.084564385242615 38.0 34.0 40.0 30.0 41.0 24 35.93612455570949 37.0 34.0 40.0 30.0 41.0 25 35.81885022793398 37.0 34.0 40.0 30.0 41.0 26 35.76207600665141 37.0 34.0 40.0 30.0 41.0 27 35.73344445074066 37.0 34.0 40.0 30.0 41.0 28 35.75137825316401 37.0 34.0 40.0 30.0 41.0 29 35.784277342795896 37.0 34.0 40.0 30.0 41.0 30 35.689902710391955 37.0 34.0 40.0 29.0 41.0 31 35.52549949098327 37.0 34.0 40.0 29.0 41.0 32 35.335431276879696 37.0 34.0 40.0 28.0 41.0 33 35.17219107764996 37.0 34.0 40.0 27.0 41.0 34 34.995438584835796 37.0 34.0 40.0 26.0 41.0 35 34.82715863149729 37.0 34.0 40.0 25.0 41.0 36 34.62671311973519 37.0 33.0 40.0 24.0 41.0 37 34.53435188785609 37.0 33.0 40.0 24.0 41.0 38 34.45024122117119 37.0 33.0 40.0 24.0 41.0 39 34.428350180061 37.0 33.0 40.0 23.0 41.0 40 34.30363072546119 37.0 33.0 40.0 23.0 41.0 41 34.26458279191279 37.0 33.0 40.0 23.0 41.0 42 34.20708402781713 37.0 33.0 40.0 23.0 41.0 43 34.11986572119171 36.0 33.0 40.0 23.0 41.0 44 33.99301054573237 36.0 33.0 40.0 23.0 41.0 45 33.91010080680617 36.0 33.0 40.0 23.0 41.0 46 33.80121147935307 36.0 33.0 40.0 23.0 41.0 47 33.76049834789388 36.0 33.0 40.0 23.0 41.0 48 33.652222185313356 36.0 32.0 40.0 23.0 41.0 49 33.551479470309964 36.0 32.0 40.0 22.0 41.0 50 33.40534496874579 35.0 32.0 40.0 21.0 41.0 51 33.058301076067224 35.0 31.0 39.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 2.0 12 11.0 13 11.0 14 37.0 15 98.0 16 286.0 17 699.0 18 1518.0 19 2997.0 20 5052.0 21 8201.0 22 12533.0 23 18410.0 24 26110.0 25 36947.0 26 48375.0 27 55544.0 28 59807.0 29 66979.0 30 79523.0 31 96029.0 32 116972.0 33 148694.0 34 226492.0 35 294584.0 36 197702.0 37 242173.0 38 339908.0 39 473091.0 40 69.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.695973394350208 24.300009183795098 29.489674092514033 14.514343329340662 2 31.638369505110685 25.250707836122015 29.860855734303037 13.250066924464262 3 27.78058936516528 24.885974390889675 33.88390510599467 13.449531137950371 4 25.280682180115715 27.079729019424704 33.023403045502775 14.616185754956806 5 22.99559764035086 31.394979395081002 31.663888731483418 13.94553423308472 6 20.9510503721391 40.73943228514316 28.124063301750198 10.185454040967542 7 86.83891818801769 3.7696157070252125 7.919049731227444 1.4724163737296565 8 87.91408657387777 2.756350008109096 7.749364461839376 1.5801989561737575 9 83.58922252335518 5.064804375394464 8.997539915313684 2.3484331859366785 10 43.09759638588353 28.537607640917518 16.88360614415432 11.48118982904463 11 35.6695084324825 23.576912329928813 25.6011380089923 15.152441228596384 12 32.881659961193584 22.25471939597984 28.799834300888485 16.063786341938094 13 22.264723870637454 32.542680222208766 28.61948019719757 16.57311570995621 14 16.832684931346247 34.95551721375381 30.917617449992278 17.294180404907664 15 16.142884219699827 26.61838986577981 42.036809432343766 15.201916482176598 16 19.489498232607943 24.121296439227702 40.05428209101336 16.334923237150992 17 19.755242090700722 24.316891734779812 29.63942857254514 26.28843760197432 18 21.958571314122917 26.174675782723135 33.927010322976486 17.939742580177462 19 25.742373053572788 27.845735690377143 28.36870397111208 18.04318728493799 20 26.71640245344109 27.1206848375543 28.609592962477358 17.553319746527254 21 22.780149715400054 27.586283708924498 31.742205009662527 17.89136156601292 22 22.49353714845116 24.521436345552992 30.795922394977442 22.189104111018406 23 19.22508309380563 28.5992758479867 30.117454877279094 22.05818618092858 24 20.156319916525163 26.169908025269113 36.01255248929697 17.661219568908752 25 18.690781619122614 27.598203102559545 33.62277268543939 20.088242592878455 26 18.128928759152043 32.697671419443466 29.509917521704043 19.66348229970045 27 18.422849282198484 32.07973878941949 31.779526389732908 17.71788553864912 28 16.69742912357285 29.34918156753704 36.30100181526503 17.65238749362508 29 17.83434387646037 26.332089938663973 35.68900934206901 20.144556842806647 30 19.052974865711423 29.800125446733013 32.53181598801026 18.615083699545306 31 24.80105359623738 27.531884377973743 28.81913981057934 18.847922215209536 32 25.209869257929817 27.60832481715455 30.329346524128958 16.852459400786678 33 24.2635475632656 28.55273159284133 28.42662050018465 18.757100343708416 34 19.45764804961594 29.362077960650367 30.166695650984522 21.013578338749166 35 19.897493214738624 28.47554863405703 31.037358506050555 20.58959964515379 36 25.568779786271595 27.110680362896687 29.533834468932397 17.786705381899324 37 20.79633273475832 30.617756770117882 30.523300460557557 18.062610034566244 38 20.289699885300262 31.58791725205219 27.10474020606873 21.017642656578822 39 20.32448106672711 30.508059268696353 29.576939685914205 19.590519978662332 40 22.53675960537037 28.342833024927167 27.652641513489435 21.467765856213035 41 19.131760103640104 27.26363940121656 29.18688241420479 24.417718080938545 42 21.62017777482507 27.103685046632187 28.098622235335725 23.17751494320702 43 21.204484036805525 27.078908339862945 29.114662612770164 22.601945010561366 44 19.289760459267917 30.442131343901863 29.20442932483474 21.063678871995485 45 19.09170312503053 33.3591391462197 26.67001451821225 20.879143210537528 46 21.81706270968851 31.06881788925125 27.489013640866716 19.625105760193524 47 20.725402572635026 29.14502775655518 29.001799633038992 21.127770037770798 48 21.64081200380639 26.991525506525377 30.5504610460538 20.81720144361443 49 20.606755755992427 26.368199839381283 31.14713416743036 21.877910237195934 50 19.674151134003296 30.68352837499585 29.3761076731585 20.266212817842355 51 19.16431372625647 30.947318234132066 27.74154846601312 22.146819573598346 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1433.0 1 2318.0 2 3203.0 3 17055.0 4 30907.0 5 22523.5 6 14140.0 7 14224.0 8 14308.0 9 15399.5 10 16491.0 11 17071.5 12 17652.0 13 17259.5 14 16867.0 15 16113.5 16 15360.0 17 14429.0 18 13498.0 19 13057.0 20 12616.0 21 13331.5 22 14047.0 23 14971.0 24 15895.0 25 17319.5 26 23567.5 27 28391.0 28 33695.0 29 38999.0 30 45663.0 31 52327.0 32 64235.0 33 76143.0 34 81439.5 35 86736.0 36 95027.5 37 103319.0 38 118038.5 39 132758.0 40 155579.0 41 178400.0 42 204074.0 43 229748.0 44 230725.5 45 231703.0 46 221535.0 47 211367.0 48 205176.5 49 198986.0 50 194262.5 51 189539.0 52 173425.0 53 157311.0 54 139107.5 55 120904.0 56 106525.0 57 92146.0 58 82204.5 59 72263.0 60 61860.0 61 51457.0 62 44940.0 63 38423.0 64 31584.5 65 24746.0 66 19993.5 67 15241.0 68 12573.5 69 9906.0 70 7839.0 71 5772.0 72 4616.5 73 3461.0 74 2512.0 75 1305.5 76 1048.0 77 771.0 78 494.0 79 401.5 80 309.0 81 217.5 82 126.0 83 91.0 84 56.0 85 37.5 86 19.0 87 17.5 88 16.0 89 12.5 90 9.0 91 4.5 92 0.0 93 1.0 94 2.0 95 1.5 96 1.0 97 3.0 98 5.0 99 2.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2558855.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.132922754156045 #Duplication Level Percentage of deduplicated Percentage of total 1 81.14127196039588 18.770347764338055 2 7.6605152059936374 3.5442021303457714 3 2.5222835247849287 1.7504336982879058 4 1.2503863416546221 1.1570036261739258 5 0.7662171701129145 0.8862421304565046 6 0.5193041484902559 0.720781365176272 7 0.39269179954617245 0.6358876345564496 8 0.30560644268763143 0.5655656185492315 9 0.2656192340370815 0.5530094300698112 >10 3.0095453737481592 16.49510682537361 >50 1.1832362709648847 20.006064934898177 >100 0.9805977050477347 33.67131763932804 >500 0.0023842197192451156 0.3328542125361954 >1k 1.7030140851750827E-4 0.13737278247292145 >5k 0.0 0.0 >10k+ 1.7030140851750827E-4 0.7738102074370872 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 19642 0.7676089500968206 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3487 0.1362718872308122 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.9079979131291145E-5 0.0 0.0 0.03556278100947494 0.0 2 3.9079979131291145E-5 0.0 0.0 0.11485605866686467 0.0 3 3.9079979131291145E-5 0.0 0.0 0.18027594373264605 0.0 4 3.9079979131291145E-5 0.0 0.0 0.2634381393240336 0.0 5 3.9079979131291145E-5 0.0 0.0 0.47278958753036027 0.0 6 3.9079979131291145E-5 0.0 0.0 0.727786451362035 0.0 7 3.9079979131291145E-5 0.0 0.0 0.8983314802909895 0.0 8 3.9079979131291145E-5 0.0 0.0 1.2797911565915223 0.0 9 3.9079979131291145E-5 0.0 0.0 1.4184860025284747 0.0 10 3.9079979131291145E-5 0.0 0.0 1.6674645495739304 0.0 11 3.9079979131291145E-5 0.0 0.0 1.9729918264223647 0.0 12 3.9079979131291145E-5 0.0 0.0 2.2088785804588382 0.0 13 3.9079979131291145E-5 0.0 0.0 2.313183044760254 0.0 14 3.9079979131291145E-5 0.0 0.0 2.3610169392169547 0.0 15 3.9079979131291145E-5 0.0 0.0 2.4292115028010577 0.0 16 3.9079979131291145E-5 0.0 0.0 2.5926048955489858 0.0 17 3.9079979131291145E-5 0.0 0.0 2.7871841116436844 0.0 18 3.9079979131291145E-5 0.0 0.0 3.031433981214254 0.0 19 3.9079979131291145E-5 0.0 0.0 3.1692690676103177 0.0 20 3.9079979131291145E-5 0.0 0.0 3.3151546297074277 0.0 21 3.9079979131291145E-5 0.0 0.0 3.520285440167575 0.0 22 3.9079979131291145E-5 0.0 0.0 3.7391333233028052 0.0 23 3.9079979131291145E-5 0.0 0.0 3.9878383104943422 0.0 24 3.9079979131291145E-5 0.0 0.0 4.168270574143514 0.0 25 3.9079979131291145E-5 0.0 0.0 4.334712205263682 0.0 26 3.9079979131291145E-5 0.0 0.0 4.501466476216902 0.0 27 3.9079979131291145E-5 0.0 0.0 4.657161113075966 0.0 28 3.9079979131291145E-5 0.0 0.0 4.824814223549205 0.0 29 3.9079979131291145E-5 0.0 0.0 5.009193565090636 0.0 30 3.9079979131291145E-5 0.0 0.0 5.22632192914409 0.0 31 3.9079979131291145E-5 0.0 0.0 5.440714694658353 0.0 32 3.9079979131291145E-5 0.0 0.0 5.635098510857395 0.0 33 3.9079979131291145E-5 0.0 0.0 5.835188004009606 0.0 34 3.9079979131291145E-5 0.0 0.0 6.043132572967206 0.0 35 3.9079979131291145E-5 0.0 0.0 6.279410126794993 0.0 36 3.9079979131291145E-5 0.0 0.0 6.5031430073216345 0.0 37 3.9079979131291145E-5 0.0 0.0 6.742820519333843 0.0 38 3.9079979131291145E-5 0.0 0.0 6.9874221087165935 0.0 39 3.9079979131291145E-5 0.0 0.0 7.272002516750656 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGACCG 30 2.1665492E-6 45.000004 1 TAACGAC 25 3.8921513E-5 45.0 28 TACGACG 80 0.0 45.0 1 GTACGTA 20 7.034911E-4 45.0 31 TAATCCG 20 7.034911E-4 45.0 1 CGTTTTT 12805 0.0 43.31316 1 CGACGGT 355 0.0 43.09859 28 TTAGACG 155 0.0 40.64516 1 CACGACG 380 0.0 40.263157 26 TCCGATT 40 3.4604454E-7 39.375 29 TCGTGCG 40 3.4604454E-7 39.375 1 CGGTCTA 400 0.0 39.375 31 GTTGCGA 40 3.4604454E-7 39.375 37 TCACGAC 395 0.0 39.3038 25 TCGATAG 75 0.0 39.0 1 AGTACGG 295 0.0 38.898304 2 GTACGGG 1010 0.0 38.76238 3 CGGCGAA 35 6.2512954E-6 38.571426 11 TAGTACG 140 0.0 38.571426 1 TAACGGG 505 0.0 38.316833 3 >>END_MODULE