SRR1548136_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1548136_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1466515
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7129	0.486118450885262	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	4725	0.3221924085331551	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTACGA	30	2.1659125E-6	45.000004	21
GCGCGTC	35	1.2122291E-7	45.000004	38
TTAGCCG	20	7.033923E-4	45.000004	15
GCGCGAA	20	7.033923E-4	45.000004	36
CGACAAC	40	6.8175723E-9	45.000004	31
CGTTCCA	20	7.033923E-4	45.000004	13
CGTTCAA	20	7.033923E-4	45.000004	36
TAGCCGT	20	7.033923E-4	45.000004	44
CCGTACT	20	7.033923E-4	45.000004	21
TACGCAA	45	3.8562575E-10	45.000004	12
CGTAGGA	20	7.033923E-4	45.000004	38
TCGCTAG	20	7.033923E-4	45.000004	33
AACGCGA	20	7.033923E-4	45.000004	27
TCGTCGT	35	1.2122291E-7	45.000004	12
TTGCGTA	20	7.033923E-4	45.000004	23
TATTACG	40	6.8175723E-9	45.000004	1
GAACGAC	20	7.033923E-4	45.000004	9
CGTCGTG	35	1.2122291E-7	45.000004	13
ACGTATT	30	2.1659125E-6	45.000004	28
CCGAAAT	20	7.033923E-4	45.000004	15