##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548136_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1466515 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.175246758471616 31.0 31.0 33.0 30.0 34.0 2 31.552617600229116 31.0 31.0 34.0 30.0 34.0 3 31.64619864099583 31.0 31.0 34.0 30.0 34.0 4 35.44264054578371 37.0 35.0 37.0 33.0 37.0 5 35.290725290910764 37.0 35.0 37.0 33.0 37.0 6 35.33531876591784 37.0 35.0 37.0 33.0 37.0 7 35.80563171873455 37.0 35.0 37.0 35.0 37.0 8 35.81599642690324 37.0 35.0 37.0 35.0 37.0 9 37.58733118992987 39.0 37.0 39.0 35.0 39.0 10 36.84879936447974 39.0 37.0 39.0 32.0 39.0 11 36.4232537682874 38.0 35.0 39.0 32.0 39.0 12 35.37305175876142 37.0 35.0 39.0 30.0 39.0 13 34.90514996437132 37.0 34.0 39.0 29.0 39.0 14 35.700166721786005 37.0 34.0 40.0 27.0 41.0 15 36.15330630781138 37.0 35.0 40.0 30.0 41.0 16 36.3808157434462 37.0 35.0 40.0 31.0 41.0 17 36.28093609680092 37.0 35.0 40.0 31.0 41.0 18 36.22524420138901 37.0 35.0 40.0 31.0 41.0 19 36.119611459821414 37.0 35.0 40.0 31.0 41.0 20 35.96092436831536 36.0 34.0 40.0 30.0 41.0 21 35.79423326730378 36.0 34.0 40.0 30.0 41.0 22 35.70151277007054 36.0 34.0 40.0 30.0 41.0 23 35.721710995114265 36.0 34.0 40.0 30.0 41.0 24 35.56283570232831 36.0 34.0 40.0 30.0 41.0 25 35.45682314875743 35.0 34.0 40.0 30.0 41.0 26 35.41019559977225 35.0 34.0 40.0 30.0 41.0 27 35.384080626519335 36.0 34.0 40.0 29.0 41.0 28 35.471140765692816 36.0 34.0 40.0 30.0 41.0 29 35.592870171801856 36.0 34.0 40.0 30.0 41.0 30 35.53678346283536 36.0 34.0 40.0 30.0 41.0 31 35.313427411243666 36.0 34.0 40.0 29.0 41.0 32 35.09822743033654 35.0 34.0 40.0 29.0 41.0 33 34.990273539650126 35.0 34.0 40.0 28.0 41.0 34 34.92031380517758 35.0 34.0 40.0 27.0 41.0 35 34.795232234242405 35.0 34.0 40.0 27.0 41.0 36 34.56528300085577 35.0 33.0 40.0 25.0 41.0 37 34.44251916959595 35.0 33.0 40.0 25.0 41.0 38 34.432847260341696 35.0 33.0 40.0 25.0 41.0 39 34.4751543625534 35.0 33.0 40.0 25.0 41.0 40 34.35498511777922 35.0 33.0 40.0 24.0 41.0 41 34.3630695901508 35.0 33.0 40.0 25.0 41.0 42 34.29681046562769 35.0 33.0 40.0 25.0 41.0 43 34.1810039447261 35.0 33.0 40.0 24.0 41.0 44 34.0657504355564 35.0 33.0 40.0 24.0 41.0 45 33.968471512395034 35.0 33.0 40.0 24.0 41.0 46 33.868834618125284 35.0 33.0 39.0 23.0 41.0 47 33.85241473834226 35.0 33.0 39.0 23.0 41.0 48 33.79531542466323 35.0 33.0 39.0 23.0 41.0 49 33.75139974701929 35.0 33.0 39.0 24.0 41.0 50 33.56987483932998 35.0 33.0 39.0 24.0 41.0 51 33.16645994074387 35.0 32.0 39.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 3.0 12 0.0 13 3.0 14 15.0 15 50.0 16 120.0 17 322.0 18 696.0 19 1395.0 20 2494.0 21 3977.0 22 6150.0 23 9053.0 24 13074.0 25 18500.0 26 24519.0 27 29313.0 28 33467.0 29 38899.0 30 46561.0 31 56908.0 32 71859.0 33 93401.0 34 160103.0 35 230465.0 36 98902.0 37 117822.0 38 165041.0 39 243348.0 40 53.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.330739883328846 24.22477778952142 30.775546107608854 13.668936219540884 2 29.279141365754867 25.262476006041535 32.194761049153946 13.263621579049653 3 27.691840860816292 25.27352260290553 33.18213587996031 13.85250065631787 4 25.108232783162805 27.3189159333522 32.74627262591927 14.826578657565726 5 23.299659396596695 31.63506680804492 31.580583901289792 13.484689894068591 6 21.906697169820973 40.00197747721639 27.43851921050927 10.652806142453368 7 88.80447864495078 3.5000664841477924 6.161614439675011 1.533840431226411 8 89.88118089484254 2.517055740991398 5.6665632468812115 1.9352001172848556 9 86.45073524648572 4.2006389297075035 7.05822988513585 2.290395938670931 10 53.11858385355759 25.107619083337028 12.302840407360307 9.470956655745082 11 46.106790588572224 20.024207048683444 21.82016549438635 12.048836868357977 12 42.16097346430142 21.17271217819115 22.870546840639204 13.79576751686822 13 21.100022843271294 41.37734697565316 24.001663808416552 13.520966372658991 14 13.756627105757527 44.683347937116224 27.73316331575197 13.826861641374277 15 12.7091778808945 25.61869466047057 48.876076957958155 12.796050500676776 16 15.145020678274685 21.23817349294075 47.102416272591825 16.514389556192743 17 16.153056736548894 20.50002898026955 28.348090541180966 34.998823742000596 18 20.752123230925015 24.22750534430265 35.54508477581205 19.475286648960292 19 27.774758526165773 25.62946850185644 26.72294521365278 19.87282775832501 20 30.130411212977705 24.65818624425935 26.527106780360242 18.6842957624027 21 21.220648953471326 29.04927668656645 29.990828597048104 19.73924576291412 22 22.359403074636127 23.43644626887553 28.19746132838737 26.006689328100975 23 17.293311012843375 30.704697872166324 26.999246512991686 25.002744601998618 24 19.313815405911296 24.192456265363806 39.31790673808314 17.17582159064176 25 14.661561593301126 26.657688465511775 37.20166517219394 21.479084768993157 26 15.028895033463687 36.19812957930877 28.579182620020934 20.19379276720661 27 16.389331169473206 36.310436647426044 30.24244552561685 17.0577866574839 28 13.625295343041156 30.78188767247522 39.69451386450189 15.898303119981724 29 14.297978540962758 24.768447646290696 40.152947634357645 20.780626178388903 30 17.600911003296932 31.202749375219486 33.428161321227535 17.76817830025605 31 28.434349461137458 28.174959001442197 25.740207225974505 17.650484311445844 32 28.040626928466466 28.276424039304064 27.973665458587192 15.709283573642274 33 26.241054472678428 29.566830206305422 26.33808723402079 17.85402808699536 34 18.061322250369074 30.535316720251753 28.751973215412047 22.651387813967126 35 17.700193997333816 28.25467178992373 32.408669532872146 21.636464679870304 36 28.56152170281245 24.184955489715414 29.440271664456212 17.813251143015925 37 17.81700153084012 32.95397592251017 30.88730766476988 18.34171488187983 38 18.172811052051973 33.035666188208104 25.80184996403037 22.989672795709556 39 18.115191457298423 31.509940232455858 30.141935131928417 20.232933178317303 40 22.733487212882242 27.19508494628422 26.84323037950515 23.22819746132839 41 16.550120523826894 24.710282540580902 29.39649441021742 29.343102525374782 42 21.902401271040528 24.93735147611855 26.65073320081963 26.509514052021288 43 22.33335492647535 25.84794563983321 27.22147403879265 24.597225394898793 44 18.246591408884328 31.656205357599482 28.821934995550674 21.275268237965516 45 16.674837966198776 38.52602939622166 24.07469408768407 20.724438549895503 46 22.345901678469023 33.494031769194315 26.227007565555077 17.93305898678159 47 20.491982693664912 29.43365734411172 26.63191307282912 23.442446889394244 48 22.49087121509156 25.30441216080299 32.02735737445577 20.17735924964968 49 21.79268537996543 22.978898954323686 32.756500956348894 22.47191470936199 50 18.955960218613516 32.92833690756658 28.326815613887348 19.78888725993256 51 17.187822831679185 34.20265050135866 25.088730766476985 23.520795900485165 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 753.0 1 1238.5 2 1724.0 3 6300.0 4 10876.0 5 7963.0 6 5050.0 7 5359.5 8 5669.0 9 6364.0 10 7059.0 11 7327.0 12 7595.0 13 7619.5 14 7644.0 15 7285.5 16 6927.0 17 6384.5 18 5842.0 19 5364.0 20 4886.0 21 5250.0 22 5614.0 23 6600.0 24 7586.0 25 8740.0 26 11579.5 27 13265.0 28 16218.0 29 19171.0 30 21968.5 31 24766.0 32 27484.5 33 30203.0 34 35326.5 35 40450.0 36 43350.0 37 46250.0 38 56910.5 39 67571.0 40 92891.5 41 118212.0 42 144229.5 43 170247.0 44 180540.5 45 190834.0 46 176339.5 47 161845.0 48 145749.0 49 129653.0 50 115108.5 51 100564.0 52 87928.0 53 75292.0 54 65783.5 55 56275.0 56 49327.5 57 42380.0 58 36349.5 59 30319.0 60 27277.0 61 24235.0 62 19666.0 63 15097.0 64 12415.0 65 9733.0 66 7536.5 67 5340.0 68 4199.5 69 3059.0 70 2580.5 71 2102.0 72 1646.5 73 1191.0 74 862.5 75 462.0 76 390.0 77 258.5 78 127.0 79 129.0 80 131.0 81 112.5 82 94.0 83 65.0 84 36.0 85 26.0 86 16.0 87 12.0 88 8.0 89 4.5 90 1.0 91 1.5 92 2.0 93 2.0 94 2.0 95 1.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1466515.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.317635100747356 #Duplication Level Percentage of deduplicated Percentage of total 1 80.58500556031251 16.37296737566126 2 8.445087576536224 3.431684155478356 3 2.686805350587386 1.6376859209991022 4 1.2321226258086853 1.0013527164222216 5 0.7168280063129358 0.7282124931131225 6 0.4688112840254328 0.5715081959964944 7 0.3074768462020417 0.4373041654143189 8 0.2550377049230883 0.4145410420447509 9 0.2043566410187081 0.3736839296369277 >10 2.418799954548755 12.149588608832083 >50 1.3487833529379332 20.249589957807775 >100 1.3258195610209123 41.236358821109754 >500 0.004390130996757967 0.5821824774743263 >1k 3.377023843659974E-4 0.3241970779099814 >5k 3.377023843659974E-4 0.4891430620995254 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7129 0.486118450885262 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 4725 0.3221924085331551 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.07555326744015574 0.0 2 0.0 0.0 0.0 0.277051376903748 0.0 3 0.0 0.0 0.0 0.4044963740568627 0.0 4 0.0 0.0 0.0 0.6152681697766473 0.0 5 0.0 0.0 0.0 1.0473810359934947 0.0 6 0.0 0.0 0.0 1.4344210594504658 0.0 7 0.0 0.0 0.0 1.687401765409832 0.0 8 0.0 0.0 0.0 2.3467881337729244 0.0 9 0.0 0.0 0.0 2.530829892636625 0.0 10 0.0 0.0 0.0 2.895435778017954 0.0 11 0.0 0.0 0.0 3.3861228831617813 0.0 12 0.0 0.0 0.0 3.7567293890618236 0.0 13 0.0 0.0 0.0 3.913768355591317 0.0 14 0.0 0.0 0.0 3.965523707565214 0.0 15 0.0 0.0 0.0 4.058942458822447 0.0 16 0.0 0.0 0.0 4.30176302322172 0.0 17 0.0 0.0 0.0 4.583314865514502 0.0 18 0.0 0.0 0.0 4.943147530028673 0.0 19 6.818886953082648E-5 0.0 0.0 5.114369781420579 0.0 20 6.818886953082648E-5 0.0 0.0 5.305298616106893 0.0 21 6.818886953082648E-5 0.0 0.0 5.559711288326406 0.0 22 6.818886953082648E-5 0.0 0.0 5.820329147673226 0.0 23 6.818886953082648E-5 0.0 0.0 6.114086797612026 0.0 24 6.818886953082648E-5 0.0 0.0 6.308834208992066 0.0 25 6.818886953082648E-5 0.0 0.0 6.481011104557403 0.0 26 6.818886953082648E-5 0.0 0.0 6.655029099600072 0.0 27 6.818886953082648E-5 0.0 0.0 6.813840976737367 0.0 28 6.818886953082648E-5 0.0 0.0 6.985063228129272 0.0 29 6.818886953082648E-5 0.0 0.0 7.16310436647426 0.0 30 6.818886953082648E-5 0.0 0.0 7.42126742651797 0.0 31 1.3637773906165297E-4 0.0 0.0 7.624674824328425 0.0 32 1.3637773906165297E-4 0.0 0.0 7.819831368925651 0.0 33 1.3637773906165297E-4 0.0 0.0 8.013828702740852 0.0 34 1.3637773906165297E-4 0.0 0.0 8.21907720002864 0.0 35 1.3637773906165297E-4 0.0 0.0 8.478876792941088 0.0 36 1.3637773906165297E-4 0.0 0.0 8.687057411618701 0.0 37 1.3637773906165297E-4 0.0 0.0 8.904170772204854 0.0 38 1.3637773906165297E-4 0.0 0.0 9.118556578009771 0.0 39 1.3637773906165297E-4 0.0 0.0 9.351762511805198 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTACGA 30 2.1659125E-6 45.000004 21 GCGCGTC 35 1.2122291E-7 45.000004 38 TTAGCCG 20 7.033923E-4 45.000004 15 GCGCGAA 20 7.033923E-4 45.000004 36 CGACAAC 40 6.8175723E-9 45.000004 31 CGTTCCA 20 7.033923E-4 45.000004 13 CGTTCAA 20 7.033923E-4 45.000004 36 TAGCCGT 20 7.033923E-4 45.000004 44 CCGTACT 20 7.033923E-4 45.000004 21 TACGCAA 45 3.8562575E-10 45.000004 12 CGTAGGA 20 7.033923E-4 45.000004 38 TCGCTAG 20 7.033923E-4 45.000004 33 AACGCGA 20 7.033923E-4 45.000004 27 TCGTCGT 35 1.2122291E-7 45.000004 12 TTGCGTA 20 7.033923E-4 45.000004 23 TATTACG 40 6.8175723E-9 45.000004 1 GAACGAC 20 7.033923E-4 45.000004 9 CGTCGTG 35 1.2122291E-7 45.000004 13 ACGTATT 30 2.1659125E-6 45.000004 28 CCGAAAT 20 7.033923E-4 45.000004 15 >>END_MODULE