##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548135_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2132857 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.09834649017726 31.0 31.0 33.0 30.0 34.0 2 31.460531578066416 31.0 31.0 34.0 30.0 34.0 3 31.443087839456652 31.0 31.0 34.0 30.0 34.0 4 35.301176778377545 37.0 35.0 37.0 33.0 37.0 5 35.172603695418864 37.0 35.0 37.0 32.0 37.0 6 35.2281156214411 37.0 35.0 37.0 32.0 37.0 7 35.750549614906205 37.0 35.0 37.0 35.0 37.0 8 35.774968504686434 37.0 35.0 37.0 35.0 37.0 9 37.54637183833703 39.0 37.0 39.0 35.0 39.0 10 36.74253501289585 39.0 37.0 39.0 32.0 39.0 11 36.369226816425105 38.0 35.0 39.0 32.0 39.0 12 35.43187611733932 37.0 35.0 39.0 30.0 39.0 13 34.958426186096865 37.0 34.0 39.0 28.0 39.0 14 35.843646339159164 38.0 34.0 40.0 28.0 41.0 15 36.268401960375215 38.0 35.0 40.0 30.0 41.0 16 36.484058706233 38.0 35.0 40.0 31.0 41.0 17 36.40335662447131 38.0 35.0 40.0 31.0 41.0 18 36.28517617449271 37.0 35.0 40.0 31.0 41.0 19 36.14043182454333 37.0 35.0 40.0 31.0 41.0 20 35.90253073694111 36.0 34.0 40.0 30.0 41.0 21 35.71484633053224 36.0 34.0 40.0 30.0 41.0 22 35.611156772348075 36.0 34.0 40.0 30.0 41.0 23 35.63320372626951 36.0 34.0 40.0 30.0 41.0 24 35.424340215963845 35.0 34.0 40.0 30.0 41.0 25 35.311389840012716 35.0 34.0 40.0 29.0 41.0 26 35.19062412529298 35.0 34.0 40.0 29.0 41.0 27 35.11055921705018 35.0 34.0 40.0 29.0 41.0 28 35.1588099905432 36.0 34.0 40.0 29.0 41.0 29 35.23287871620085 36.0 34.0 40.0 29.0 41.0 30 35.14729773257185 36.0 34.0 40.0 29.0 41.0 31 34.89142825796572 35.0 34.0 40.0 28.0 41.0 32 34.60678704667026 35.0 33.0 40.0 27.0 41.0 33 34.392843964691494 35.0 33.0 40.0 25.0 41.0 34 34.21749184310059 35.0 33.0 40.0 24.0 41.0 35 34.002040924450164 35.0 33.0 40.0 23.0 41.0 36 33.7407950931544 35.0 33.0 40.0 22.0 41.0 37 33.61797110636109 35.0 33.0 40.0 22.0 41.0 38 33.591645384571024 35.0 33.0 40.0 23.0 41.0 39 33.62732710162941 35.0 33.0 40.0 23.0 41.0 40 33.484134660692206 35.0 33.0 40.0 22.0 41.0 41 33.47227826338099 35.0 33.0 40.0 22.0 41.0 42 33.41466446179936 35.0 33.0 40.0 21.0 41.0 43 33.29601093744213 35.0 33.0 39.0 21.0 41.0 44 33.15803403603711 35.0 32.0 39.0 21.0 41.0 45 33.06619149807043 35.0 32.0 39.0 20.0 41.0 46 32.976555390258234 35.0 32.0 39.0 20.0 41.0 47 32.954408570288585 35.0 32.0 39.0 20.0 41.0 48 32.87145645488657 35.0 32.0 39.0 20.0 41.0 49 32.80793508425553 35.0 32.0 39.0 20.0 40.0 50 32.60715791072725 35.0 31.0 39.0 18.0 40.0 51 32.22833832741717 35.0 31.0 38.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 2.0 12 3.0 13 7.0 14 25.0 15 89.0 16 204.0 17 644.0 18 1484.0 19 2849.0 20 4953.0 21 8080.0 22 12272.0 23 18155.0 24 25769.0 25 36452.0 26 47421.0 27 53182.0 28 55480.0 29 61316.0 30 71113.0 31 85094.0 32 104134.0 33 134784.0 34 222909.0 35 318317.0 36 160948.0 37 169789.0 38 225852.0 39 311475.0 40 54.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.827222359492456 24.34063793306349 29.312607455633454 16.519532251810602 2 31.28296927548354 25.859258262508927 30.2986088612598 12.55916360074773 3 26.203397602370902 24.39483753481832 36.19590999302813 13.205854869782643 4 23.60748985984527 26.49966687874527 35.94399436999293 13.948848891416537 5 21.923832680765752 30.37381315296806 34.57798624099037 13.124367925275815 6 20.070637647062135 39.59852910907763 30.508702646262737 9.822130597597495 7 84.9106620837684 3.7113130416150732 9.95617615245654 1.421848722159995 8 86.5966635362802 2.3690758452160643 9.454736065287078 1.579524553216648 9 83.57142555736273 3.724581629241904 10.665647064008512 2.0383457493868553 10 50.26281649449541 20.893571392737535 17.43403331775173 11.409578795015324 11 43.05595733797437 23.762071249971285 21.76470340018107 11.417268011873276 12 38.79027051508845 22.789244661034473 25.231836921087535 13.188647902789544 13 19.737422621394686 41.58867659669635 25.61742301523262 13.056477766676341 14 13.664394753140973 44.07660710493015 29.338582005263365 12.920416136665514 15 11.915191688894286 26.208883202202493 50.30187208987756 11.574053019025655 16 13.469679401853945 22.171903695371984 48.58276949650164 15.77564740627243 17 14.809900523101174 22.528842768174332 30.049600137280652 32.611656571443845 18 19.299699886115196 26.585654828242117 36.45748402260442 17.65716126303826 19 26.16265413011749 28.692078278103033 27.543946921898655 17.60132066988082 20 27.688869905483582 27.01062471604988 27.96221218769003 17.3382931907765 21 18.7138190699142 31.246773693688795 31.71731625702051 18.32209097937649 22 19.725466826889942 26.477724479418917 28.944650297699283 24.852158395991854 23 16.534863800057856 32.75329757222355 27.733692413509203 22.978146214209392 24 17.610416450798155 26.578575122476565 40.383813823430266 15.427194603295016 25 14.838266231632034 27.49007551842435 38.08820750758255 19.583450742361066 26 13.7636981757333 38.302520984763625 29.841522427429503 18.09225841207357 27 15.127784000521366 37.66290942149427 31.556733526907806 15.65257305107656 28 12.581996823978352 31.858629059519693 40.88234701154367 14.67702710495828 29 12.944046412863122 26.917885259068004 40.771697305539 19.366371022529876 30 16.02714106008982 33.72373300225941 33.982915872934754 16.266210064716013 31 26.1886286797474 29.716338226144558 26.979727192212138 17.11530590189591 32 25.793149751718005 30.272259227880728 28.972265838731804 14.96232518166947 33 24.001234025534764 31.180571411960578 27.09211166055671 17.72608290194795 34 16.57668563809013 32.13970744405274 29.218742747404068 22.064864170453056 35 16.276337325943558 29.580464138008317 32.987256060767315 21.15594247528081 36 27.143966988879235 27.112835037698265 28.56084585136275 17.182352122059754 37 16.546022541595615 34.45852206688025 31.519881548552014 17.475573842972125 38 16.318112278507186 36.42105401346644 26.067148430485492 21.193685277540876 39 18.18438835796305 34.20205855338637 29.032748093285203 18.580804995365373 40 21.337764322690177 29.323156686078818 27.108896658331993 22.23018233289902 41 15.246357350727216 27.805427180537656 28.668260460030844 28.279955008704288 42 19.80029603484903 28.182573890326452 26.669017191494788 25.348112883329733 43 20.312238466995208 29.131535775722423 27.55402729765756 23.00219845962481 44 17.276732570444246 34.452848925174074 28.81332410002171 19.457094404359975 45 15.507978265772154 40.77150976366442 23.916324441816776 19.804187528746652 46 21.232834643860325 35.24080611123953 25.65193072015611 17.87442852474404 47 19.110141936379232 30.80431552607606 28.08463014632486 22.000912391219853 48 20.868956521698358 28.060952984658606 31.061576092536914 20.008514401106122 49 19.813799049819092 26.603049337109802 31.986485732517462 21.59666588055364 50 17.590818324904106 34.98893737367297 28.155474089449033 19.264770211973893 51 16.35552688248673 36.055581785370514 25.2814886323837 22.307402699759056 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2198.0 1 2584.0 2 2970.0 3 21495.5 4 40021.0 5 27337.5 6 14654.0 7 15928.0 8 17202.0 9 20367.0 10 23532.0 11 25770.5 12 28009.0 13 27912.5 14 27816.0 15 25882.5 16 23949.0 17 21465.0 18 18981.0 19 17458.5 20 15936.0 21 15502.0 22 15068.0 23 14654.5 24 14241.0 25 15930.5 26 19093.5 27 20567.0 28 23694.5 29 26822.0 30 29867.5 31 32913.0 32 40045.5 33 47178.0 34 54853.5 35 62529.0 36 63830.5 37 65132.0 38 80682.5 39 96233.0 40 127320.5 41 158408.0 42 194707.0 43 231006.0 44 232751.0 45 234496.0 46 232486.0 47 230476.0 48 210613.0 49 190750.0 50 171805.0 51 152860.0 52 128988.5 53 105117.0 54 89964.5 55 74812.0 56 61616.5 57 48421.0 58 41404.0 59 34387.0 60 29448.0 61 24509.0 62 20013.5 63 15518.0 64 12219.0 65 8920.0 66 6699.5 67 4479.0 68 3270.0 69 2061.0 70 1785.0 71 1509.0 72 1133.0 73 757.0 74 559.5 75 285.0 76 208.0 77 139.5 78 71.0 79 61.0 80 51.0 81 35.0 82 19.0 83 18.5 84 18.0 85 25.0 86 32.0 87 25.0 88 18.0 89 14.0 90 10.0 91 8.5 92 7.0 93 4.5 94 2.0 95 2.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2132857.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.829240687840816 #Duplication Level Percentage of deduplicated Percentage of total 1 79.43420072412253 19.722908886254977 2 8.557896811647366 4.249721594361959 3 3.217925571289184 2.3969594557529046 4 1.71309913004802 1.7013980248837202 5 1.1036201398369705 1.3701025039980341 6 0.7612417446673148 1.1340632699985973 7 0.5362488748248374 0.9320256667126797 8 0.4067843078206626 0.8080116389532768 9 0.3236993590069708 0.7233488365755484 >10 2.4061324404571667 12.569013239333868 >50 0.6002508311122584 10.939886476430653 >100 0.9301448660453969 40.12108884782394 >500 0.007042225380175708 1.1346549042451672 >1k 0.0013323129097629715 0.4502231267281844 >5k 1.9033041568042452E-4 0.2756063057708378 >10k+ 1.9033041568042452E-4 1.4709872221757319 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 31127 1.4594039825454777 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 5832 0.27343605314374103 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 9.377093729209225E-5 0.0 0.0 0.06671802188332364 0.0 2 9.377093729209225E-5 0.0 0.0 0.2216744957585061 0.0 3 9.377093729209225E-5 0.0 0.0 0.3575954693633938 0.0 4 9.377093729209225E-5 0.0 0.0 0.533697289597943 0.0 5 9.377093729209225E-5 0.0 0.0 0.9784059597056906 0.0 6 9.377093729209225E-5 0.0 0.0 1.5498460515637007 0.0 7 9.377093729209225E-5 0.0 0.0 1.9712526437543634 0.0 8 9.377093729209225E-5 0.0 0.0 2.759584913568983 0.0 9 9.377093729209225E-5 0.0 0.0 3.064715543517451 0.0 10 9.377093729209225E-5 0.0 0.0 3.5359613888788606 0.0 11 9.377093729209225E-5 0.0 0.0 4.1109647763539705 0.0 12 9.377093729209225E-5 0.0 0.0 4.517743102327066 0.0 13 9.377093729209225E-5 0.0 0.0 4.702893818010303 0.0 14 9.377093729209225E-5 0.0 0.0 4.773315791916664 0.0 15 9.377093729209225E-5 0.0 0.0 4.876182510126089 0.0 16 9.377093729209225E-5 0.0 0.0 5.123128273484814 0.0 17 9.377093729209225E-5 0.0 0.0 5.416584421740417 0.0 18 9.377093729209225E-5 0.0 0.0 5.783932068582188 0.0 19 9.377093729209225E-5 0.0 0.0 5.985492698291541 0.0 20 9.377093729209225E-5 0.0 0.0 6.177207379585223 0.0 21 9.377093729209225E-5 0.0 0.0 6.470663527840825 0.0 22 9.377093729209225E-5 0.0 0.0 6.76777674265082 0.0 23 9.377093729209225E-5 0.0 0.0 7.12541909748286 0.0 24 9.377093729209225E-5 0.0 0.0 7.367254344759166 0.0 25 9.377093729209225E-5 0.0 0.0 7.576363534920532 0.0 26 9.377093729209225E-5 0.0 0.0 7.782987795243657 0.0 27 9.377093729209225E-5 0.0 0.0 7.970013929672735 0.0 28 9.377093729209225E-5 0.0 0.0 8.189859892154045 0.0 29 9.377093729209225E-5 0.0 0.0 8.424849861008028 0.0 30 9.377093729209225E-5 0.0 0.0 8.695519671501652 0.0 31 9.377093729209225E-5 0.0 0.0 8.963141926533284 0.0 32 9.377093729209225E-5 0.0 0.0 9.198460093667789 0.0 33 9.377093729209225E-5 0.0 0.0 9.446156024524852 0.0 34 9.377093729209225E-5 0.0 0.0 9.693429986164098 0.0 35 9.377093729209225E-5 0.0 0.0 9.982244473023743 0.0 36 1.4065640593813837E-4 0.0 0.0 10.247803767434947 0.0 37 1.4065640593813837E-4 0.0 0.0 10.518098494179403 0.0 38 1.4065640593813837E-4 0.0 0.0 10.785017467181344 0.0 39 1.4065640593813837E-4 0.0 0.0 11.047060351444095 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTCGCG 35 1.2125747E-7 45.000004 1 CCGATTC 20 7.034645E-4 45.000004 12 CTATCGT 35 1.2125747E-7 45.000004 13 GCGCGTC 35 1.2125747E-7 45.000004 38 TAGAACG 35 1.2125747E-7 45.000004 1 TATGCGT 40 6.8193913E-9 45.000004 20 CCGCTCG 90 0.0 45.000004 19 CCTCGCT 20 7.034645E-4 45.000004 43 CTAAACG 35 1.2125747E-7 45.000004 1 GTCCGTT 40 6.8193913E-9 45.000004 22 TCGTACT 20 7.034645E-4 45.000004 23 ACCGTAA 35 1.2125747E-7 45.000004 25 GCTACCG 35 1.2125747E-7 45.000004 1 TCGGTCA 20 7.034645E-4 45.000004 12 CGTATCA 25 3.8919337E-5 45.0 20 ATCGTCC 25 3.8919337E-5 45.0 37 TGCGCAC 25 3.8919337E-5 45.0 12 GTATCCG 25 3.8919337E-5 45.0 19 CCCGGTC 25 3.8919337E-5 45.0 43 GTCGATC 30 2.16638E-6 44.999996 23 >>END_MODULE