##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548133_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2283616 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.108698222468227 31.0 31.0 33.0 30.0 34.0 2 31.48992387511736 31.0 31.0 34.0 30.0 34.0 3 31.37870815408545 31.0 31.0 34.0 30.0 34.0 4 35.3091110764682 37.0 35.0 37.0 33.0 37.0 5 35.20977913975029 37.0 35.0 37.0 32.0 37.0 6 35.27182065636254 37.0 35.0 37.0 32.0 37.0 7 35.74074494135616 37.0 35.0 37.0 35.0 37.0 8 35.7490685824587 37.0 35.0 37.0 35.0 37.0 9 37.472346926978965 39.0 37.0 39.0 35.0 39.0 10 36.81781394069756 39.0 37.0 39.0 32.0 39.0 11 36.46243326373611 39.0 35.0 39.0 32.0 39.0 12 36.0839637662374 38.0 35.0 39.0 31.0 39.0 13 35.93603083881003 38.0 35.0 39.0 31.0 39.0 14 36.92215678993316 39.0 35.0 41.0 31.0 41.0 15 37.103344432689205 39.0 35.0 41.0 31.0 41.0 16 37.13975729719883 39.0 35.0 41.0 32.0 41.0 17 36.966374381682385 39.0 35.0 41.0 31.0 41.0 18 36.770989518377874 39.0 35.0 40.0 31.0 41.0 19 36.588569181508625 38.0 35.0 40.0 31.0 41.0 20 36.35466076608326 38.0 35.0 40.0 31.0 41.0 21 36.232057403696594 38.0 35.0 40.0 30.0 41.0 22 36.18296508694982 38.0 35.0 40.0 30.0 41.0 23 36.10789554811317 37.0 35.0 40.0 30.0 41.0 24 35.939999106679934 37.0 34.0 40.0 30.0 41.0 25 35.823821518153665 37.0 34.0 40.0 30.0 41.0 26 35.751430187912504 37.0 34.0 40.0 30.0 41.0 27 35.69531479898547 37.0 34.0 40.0 30.0 41.0 28 35.643965973263455 37.0 34.0 40.0 29.0 41.0 29 35.59937353740734 37.0 34.0 40.0 29.0 41.0 30 35.42959411739977 37.0 34.0 40.0 29.0 41.0 31 35.21127369925592 37.0 34.0 40.0 27.0 41.0 32 34.89144059246388 37.0 34.0 40.0 25.0 41.0 33 34.56545277314575 37.0 33.0 40.0 23.0 41.0 34 34.18130631419643 37.0 33.0 40.0 22.0 41.0 35 33.86709367949778 37.0 33.0 40.0 20.0 41.0 36 33.693700692235474 37.0 33.0 40.0 18.0 41.0 37 33.6256240103415 37.0 33.0 40.0 18.0 41.0 38 33.520400978097896 37.0 33.0 40.0 18.0 41.0 39 33.46674834998529 37.0 33.0 40.0 18.0 41.0 40 33.34936653097544 36.0 32.0 40.0 18.0 41.0 41 33.248201098608526 36.0 32.0 40.0 17.0 41.0 42 33.20113626809411 36.0 32.0 40.0 17.0 41.0 43 33.090097021565796 36.0 32.0 40.0 16.0 41.0 44 32.939344443198856 36.0 31.0 40.0 15.0 41.0 45 32.874008151983524 36.0 31.0 40.0 15.0 41.0 46 32.765457940389275 36.0 31.0 40.0 15.0 41.0 47 32.73851908552051 35.0 31.0 40.0 15.0 41.0 48 32.61099195311296 35.0 31.0 40.0 15.0 41.0 49 32.50237167719967 35.0 31.0 40.0 15.0 41.0 50 32.39188199767386 35.0 31.0 39.0 15.0 41.0 51 32.08160128497961 35.0 30.0 39.0 14.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 4.0 11 2.0 12 4.0 13 7.0 14 47.0 15 111.0 16 338.0 17 810.0 18 1911.0 19 3584.0 20 6062.0 21 9379.0 22 14120.0 23 20740.0 24 29373.0 25 43212.0 26 59382.0 27 68065.0 28 68643.0 29 68377.0 30 73291.0 31 84292.0 32 99540.0 33 122539.0 34 178829.0 35 219903.0 36 181653.0 37 213346.0 38 298846.0 39 417157.0 40 48.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.805105586928804 22.435733503356083 26.86336056499867 21.89580034471645 2 37.237871866373325 23.20849915222174 27.29513193111276 12.258497050292167 3 25.887627341899865 23.308603548057118 38.19350538794614 12.610263722096885 4 23.688133206283368 25.411277552793464 37.568312711068764 13.332276529854406 5 21.918133346412006 28.920273811358825 35.93104094558805 13.230551896641115 6 20.491448649860573 36.78065839440606 32.89826310553088 9.829629850202485 7 80.29778211398063 3.1827154828132227 14.778141333744376 1.7413610694617658 8 81.26059722825553 2.4803644745876716 14.424053781371299 1.834984515785491 9 76.60758201028544 4.949737609125177 15.699837450779816 2.7428429298095653 10 38.71022974090215 31.92949252413716 20.45681060213276 8.903467132827936 11 27.71621848857251 22.79126613230946 34.76587131987164 14.726644059246388 12 27.663976780684667 21.004056724072697 35.05422978294074 16.277736712301895 13 22.1318295194989 24.72079368860614 35.66032993287838 17.487046859016576 14 16.304010831943724 28.52703782071942 37.28223133836862 17.886720008968233 15 16.60738933340807 25.943722587335174 41.941202023457535 15.507686055799224 16 21.33738772192873 24.46554061628575 39.58362526799602 14.613446393789499 17 20.453964239171558 24.212258102938495 35.68432696215125 19.649450695738686 18 21.047803133276346 25.306969297815396 36.982881535249355 16.6623460336589 19 22.36943514145986 27.151981769264182 33.626537911803034 16.85204517747292 20 23.90152284797444 27.094572817846785 33.37461289463728 15.629291439541499 21 22.26652817286269 26.217936815997085 35.478600605355716 16.03693440578451 22 20.783573070078333 23.355896963412413 37.00420736235864 18.85632260415061 23 18.98296386082424 25.88653258691479 36.356550313187505 18.773953239073467 24 19.67931561173157 25.04812542914395 38.30753506719169 16.965023891932795 25 19.397175356977705 26.367130025363284 35.58658723708364 18.64910738057537 26 17.730958269691577 29.3474472065356 34.12806706556619 18.793527458206633 27 17.465896192704903 28.19015981671174 36.22474181298432 18.119202177599036 28 16.666900214396815 27.712146000028028 37.849971273629194 17.770982511945967 29 18.63036517523086 25.907332931631238 37.006002760534166 18.45629913260373 30 19.42349326681894 25.98322134719673 36.79348892283116 17.799796463153175 31 22.516745372251727 25.346643218474558 34.15110071045219 17.985510698821518 32 23.36360403850735 25.946919271891595 33.537862758011855 17.1516139315892 33 22.37990099911719 26.38915649566302 33.26434917254039 17.966593332679402 34 19.097475232263218 26.946693314462678 35.01267288370724 18.94315856956686 35 18.460415411347615 28.452901013130056 34.198131384611074 18.888552190911255 36 20.58165646063086 29.01341556548912 32.02902764738029 18.37590032649973 37 19.80184058966131 30.205122052043777 31.80788714039488 18.18515021790003 38 19.286867844681417 30.58307526309152 30.542175216849067 19.587881675377997 39 19.646122640584057 29.599766335495985 30.79694659697602 19.957164426943937 40 20.92702976332273 28.128941117946276 30.643856059862955 20.30017305886804 41 18.168378571528663 27.95351757913765 31.622698387119375 22.255405462214313 42 19.583283704440678 28.600955677311774 30.165929823578047 21.649830794669505 43 19.81274434931267 28.205573966901614 30.405374633913933 21.576307049871783 44 19.437462340428514 29.68165400837969 30.44264009360593 20.438243557585864 45 19.33652593080448 29.93467378053053 29.79007854210165 20.938721746563346 46 20.15527128904334 30.053564171909812 29.786487745750602 20.004676793296248 47 19.080922536888863 28.891897762145653 31.48186910583916 20.545310595126328 48 19.810686209940727 27.166826646861818 33.02144493645166 20.001042206745794 49 19.828070919103737 26.562083993105674 32.51431063716492 21.095534450625674 50 18.242165057522804 28.73692424645825 32.48457709177025 20.5363336042487 51 17.679986477586425 28.940198352087215 32.221222832560294 21.15859233776607 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1606.0 1 2732.5 2 3859.0 3 41259.0 4 78659.0 5 54145.0 6 29631.0 7 28770.5 8 27910.0 9 28803.5 10 29697.0 11 29889.0 12 30081.0 13 29472.5 14 28864.0 15 26852.5 16 24841.0 17 23347.5 18 21854.0 19 20583.5 20 19313.0 21 19299.0 22 19285.0 23 19476.5 24 19668.0 25 20919.5 26 25146.0 27 28121.0 28 33192.0 29 38263.0 30 43189.0 31 48115.0 32 54507.5 33 60900.0 34 68855.5 35 76811.0 36 81438.5 37 86066.0 38 94071.0 39 102076.0 40 114256.0 41 126436.0 42 137900.5 43 149365.0 44 156680.0 45 163995.0 46 168570.5 47 173146.0 48 167576.0 49 162006.0 50 152632.5 51 143259.0 52 132041.5 53 120824.0 54 111451.0 55 102078.0 56 95585.0 57 89092.0 58 83303.0 59 77514.0 60 71575.0 61 65636.0 62 56615.5 63 47595.0 64 37709.5 65 27824.0 66 21975.5 67 16127.0 68 12475.5 69 8824.0 70 7093.0 71 5362.0 72 4259.5 73 3157.0 74 2388.0 75 1252.5 76 886.0 77 720.5 78 555.0 79 404.5 80 254.0 81 180.0 82 106.0 83 80.5 84 55.0 85 42.0 86 29.0 87 28.5 88 28.0 89 34.0 90 40.0 91 24.5 92 9.0 93 5.5 94 2.0 95 1.5 96 1.0 97 0.5 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2283616.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.690713132624843 #Duplication Level Percentage of deduplicated Percentage of total 1 77.80154473959448 21.543802566591882 2 6.102444211461525 3.3796206413485623 3 2.5793807122138013 2.1427467408521377 4 1.6680150821574444 1.8475410856365382 5 1.1853990578703728 1.6412272629586124 6 0.8911442540298109 1.4805851938875874 7 0.7216581637934318 1.39882604353945 8 0.6198025154514429 1.3730218923396147 9 0.5006092439719844 1.2476004269731582 >10 7.169535389001378 46.546253818463434 >50 0.7178397956607182 12.380562055120247 >100 0.03926179100999863 1.6989910975731746 >500 0.0017626419819442316 0.34632071744744736 >1k 0.001442161621590735 0.7054648413449026 >5k 0.0 0.0 >10k+ 1.6024018017674833E-4 2.2674356159233833 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 51101 2.23772297969536 No Hit CGTTTCTGTCTCTTATACACATCTGACGCCGTTCTACTCGTATGCCGTCTT 3766 0.16491389095189382 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCCGTTCTACTCGTATGCCGTCT 2800 0.12261255832854559 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.75160797612208E-4 0.0 0.0 0.03389361433796225 0.0 2 1.75160797612208E-4 0.0 0.0 0.11858385998346482 0.0 3 1.75160797612208E-4 0.0 0.0 0.2436048792791783 0.0 4 1.75160797612208E-4 0.0 0.0 0.35868552331039893 0.0 5 1.75160797612208E-4 0.0 0.0 0.683740173479254 0.0 6 1.75160797612208E-4 0.0 0.0 1.2602819388198365 0.0 7 1.75160797612208E-4 0.0 0.0 1.701862309600213 0.0 8 1.75160797612208E-4 0.0 0.0 2.2950443507139555 0.0 9 1.75160797612208E-4 0.0 0.0 2.6915646063085914 0.0 10 1.75160797612208E-4 0.0 0.0 3.0967991115844344 0.0 11 1.75160797612208E-4 0.0 0.0 3.370838179448734 0.0 12 1.75160797612208E-4 0.0 0.0 3.5879937782884688 0.0 13 1.75160797612208E-4 0.0 0.0 3.7081102952510405 0.0 14 1.75160797612208E-4 0.0 0.0 3.789209744545493 0.0 15 1.75160797612208E-4 0.0 0.0 3.853581337667979 0.0 16 1.75160797612208E-4 0.0 0.0 3.942519232655578 0.0 17 1.75160797612208E-4 0.0 0.0 4.036799531970349 0.0 18 1.75160797612208E-4 0.0 0.0 4.168345290977117 0.0 19 1.75160797612208E-4 0.0 0.0 4.255925689783221 0.0 20 1.75160797612208E-4 0.0 0.0 4.346483822148732 0.0 21 1.75160797612208E-4 0.0 0.0 4.4482522455614255 0.0 22 1.75160797612208E-4 0.0 0.0 4.564077322982498 0.0 23 1.75160797612208E-4 0.0 0.0 4.690017936465676 0.0 24 1.75160797612208E-4 0.0 0.0 4.7941948208455365 0.0 25 1.75160797612208E-4 0.0 0.0 4.889613665344786 0.0 26 1.75160797612208E-4 0.0 0.0 4.9817482448888075 0.0 27 1.75160797612208E-4 0.0 0.0 5.083823199697322 0.0 28 1.75160797612208E-4 0.0 0.0 5.188262825273601 0.0 29 1.75160797612208E-4 0.0 0.0 5.3087734540308 0.0 30 2.1895099701526002E-4 0.0 0.0 5.461907781343273 0.0 31 2.1895099701526002E-4 0.0 0.0 5.588154926222272 0.0 32 2.1895099701526002E-4 0.0 0.0 5.717336014461275 0.0 33 2.1895099701526002E-4 0.0 0.0 5.842926306349229 0.0 34 2.1895099701526002E-4 0.0 0.0 5.9810843854658575 0.0 35 2.1895099701526002E-4 0.0 0.0 6.138116040525202 0.0 36 2.1895099701526002E-4 0.0 0.0 6.280915880778554 0.0 37 2.1895099701526002E-4 0.0 0.0 6.442326555778204 0.0 38 2.1895099701526002E-4 0.0 0.0 6.641440592463882 0.0 39 2.1895099701526002E-4 0.0 0.0 6.901641957316817 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 26280 0.0 43.9298 1 CGACGGT 150 0.0 42.000004 28 CTACGCG 40 3.4602272E-7 39.375 1 GTTTTTT 30340 0.0 38.66678 2 ATAGCGG 280 0.0 38.571426 2 GGGCGAT 2660 0.0 38.402256 7 CAACGCG 65 9.094947E-12 38.07692 1 TAGGGAT 3240 0.0 37.77778 5 GTAGGGA 2585 0.0 37.601547 4 TAAGGGA 2815 0.0 37.40675 4 AGGGCGA 1350 0.0 37.333332 6 GCGTAAG 145 0.0 37.24138 1 GGCGATT 885 0.0 37.118645 8 AGGGATC 2660 0.0 36.8797 6 AGGGATT 4030 0.0 36.848633 6 AAGGGAT 3395 0.0 36.782032 5 TACGGGA 930 0.0 36.774193 4 CTCGTCC 380 0.0 36.710526 37 ACGGGAC 585 0.0 36.53846 5 GCGATAT 185 0.0 36.486485 9 >>END_MODULE