SRR1548132_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1548132_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1427566
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14326	1.0035262817971287	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	5068	0.35500985593660817	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGGAAAT	30	2.1658725E-6	45.000004	6
TACGGAG	35	1.2122109E-7	45.000004	1
TCCTTAC	35	1.2122109E-7	45.000004	13
GTGCGTA	35	1.2122109E-7	45.000004	19
ATCGCCG	35	1.2122109E-7	45.000004	22
CGGACCG	30	2.1658725E-6	45.000004	16
GTGCAAC	20	7.033862E-4	45.0	43
CTAGACG	50	2.1827873E-11	45.0	1
GTCGCGA	20	7.033862E-4	45.0	1
TAGACGG	175	0.0	45.0	2
CGCATCA	20	7.033862E-4	45.0	20
GCTGCGC	20	7.033862E-4	45.0	23
TCCTCGA	20	7.033862E-4	45.0	27
TTGTACG	40	6.8175723E-9	45.0	1
GCGTTCC	20	7.033862E-4	45.0	10
ATGTACG	40	6.8175723E-9	45.0	1
AAACGTC	20	7.033862E-4	45.0	32
TGTTGCG	100	0.0	45.0	1
GCCGAAT	20	7.033862E-4	45.0	8
GTTCGCG	25	3.8912818E-5	45.0	1