##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548132_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1427566 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.06026201240433 31.0 31.0 33.0 30.0 34.0 2 31.4148964040892 31.0 31.0 34.0 30.0 34.0 3 31.453077475927557 31.0 31.0 34.0 30.0 34.0 4 35.28797477664781 37.0 35.0 37.0 33.0 37.0 5 35.12687749638195 37.0 35.0 37.0 32.0 37.0 6 35.18816152808346 37.0 35.0 37.0 32.0 37.0 7 35.71240419006897 37.0 35.0 37.0 35.0 37.0 8 35.734369549288786 37.0 35.0 37.0 35.0 37.0 9 37.497474722709846 39.0 37.0 39.0 35.0 39.0 10 36.70409073906215 39.0 37.0 39.0 32.0 39.0 11 36.28744520393453 38.0 35.0 39.0 32.0 39.0 12 35.07690012230608 35.0 34.0 39.0 30.0 39.0 13 34.458301052280596 35.0 33.0 39.0 26.0 39.0 14 35.24830095421157 36.0 33.0 40.0 26.0 41.0 15 35.76713651067622 36.0 33.0 40.0 30.0 41.0 16 36.069188394792256 36.0 34.0 40.0 31.0 41.0 17 35.98574286582897 36.0 34.0 40.0 31.0 41.0 18 35.924914855075 36.0 34.0 40.0 30.0 41.0 19 35.77982594149763 36.0 34.0 40.0 30.0 41.0 20 35.57086187258592 36.0 34.0 40.0 30.0 41.0 21 35.342422697094214 35.0 34.0 40.0 29.0 41.0 22 35.22288006298833 35.0 34.0 40.0 29.0 41.0 23 35.26432963519725 35.0 34.0 40.0 29.0 41.0 24 35.092484690725335 35.0 34.0 40.0 29.0 41.0 25 34.99572629216443 35.0 34.0 39.0 29.0 41.0 26 34.87164306238731 35.0 34.0 39.0 29.0 41.0 27 34.78367234859894 35.0 34.0 39.0 29.0 41.0 28 34.824237198140054 35.0 34.0 39.0 28.0 41.0 29 34.93910754388939 35.0 34.0 39.0 29.0 41.0 30 34.865591503300024 36.0 34.0 39.0 29.0 41.0 31 34.619275045777215 35.0 34.0 39.0 27.0 41.0 32 34.33909675629708 35.0 33.0 39.0 26.0 41.0 33 34.14515335893402 35.0 33.0 39.0 25.0 41.0 34 34.01998786746112 35.0 33.0 39.0 24.0 41.0 35 33.85975009211483 35.0 33.0 39.0 23.0 41.0 36 33.569578569397144 35.0 33.0 39.0 23.0 41.0 37 33.443290187634055 35.0 33.0 39.0 23.0 41.0 38 33.42441190109599 35.0 33.0 39.0 23.0 41.0 39 33.468590594060096 35.0 33.0 39.0 23.0 41.0 40 33.33378631881118 35.0 32.0 39.0 23.0 41.0 41 33.3357855258531 35.0 33.0 39.0 23.0 41.0 42 33.26663005423217 35.0 32.0 39.0 22.0 41.0 43 33.12821823999731 35.0 32.0 39.0 22.0 41.0 44 33.01044715270607 35.0 32.0 39.0 22.0 41.0 45 32.920657258578586 35.0 32.0 39.0 22.0 41.0 46 32.81241077470324 35.0 32.0 38.0 21.0 40.0 47 32.78061399613048 35.0 32.0 38.0 21.0 40.0 48 32.72121569160375 35.0 32.0 38.0 20.0 40.0 49 32.6775644698739 35.0 32.0 38.0 20.0 40.0 50 32.45422208150096 35.0 31.0 38.0 20.0 40.0 51 32.05204663041849 35.0 31.0 38.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 2.0 12 3.0 13 7.0 14 20.0 15 55.0 16 201.0 17 500.0 18 1092.0 19 2135.0 20 3691.0 21 5694.0 22 8681.0 23 12554.0 24 17748.0 25 24526.0 26 31301.0 27 35856.0 28 38638.0 29 43359.0 30 50714.0 31 60957.0 32 74987.0 33 96562.0 34 164476.0 35 233177.0 36 97173.0 37 104227.0 38 136799.0 39 182388.0 40 41.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.79647455879448 23.339026006503378 30.647829942713685 15.21666949198846 2 30.78876913571772 25.431818914151783 30.479081177332606 13.300330772797894 3 26.551837183009404 24.737280097732782 34.64295170941308 14.067931009844727 4 24.36896087466359 27.41862722984437 33.98904148739883 14.223370408093217 5 22.11974787855693 32.04671447764937 32.81214318637457 13.021394457419131 6 20.370686889432783 39.36343398483853 29.251186985400324 11.014692140328364 7 86.25632720308553 4.093190787676367 8.280387736889223 1.3700942723488791 8 87.97162442927332 2.7644956520399058 7.647982650189203 1.6158972684975685 9 84.81212077059834 4.247649495715084 8.92351036659601 2.0167193670905585 10 55.53067248729656 20.540416345023626 14.808141970318712 9.120769197361103 11 50.0031522185314 18.497708687374175 19.772535910774003 11.726603183320421 12 44.37756292878928 21.18557040445065 22.09460017960641 12.34226648715366 13 21.03167209081752 44.98685174625901 22.63061742854621 11.350858734377255 14 13.304043385734879 47.60655549375651 26.95749268335054 12.131908437158073 15 11.367320320041244 25.931550625330107 51.28645540731567 11.414673647312979 16 12.966195608469242 20.436813429291536 50.494828260129474 16.102162702109744 17 14.12404049970369 20.35625673348903 29.31269027141302 36.20701249539426 18 20.324454350972214 24.50772853934599 36.14950201952134 19.018315090160453 19 27.79570261550079 27.22199884278555 25.93309170994546 19.0492068317682 20 30.557816591316968 25.367723804013266 26.20082013721257 17.8736394674572 21 20.013575554475242 30.520200116842233 29.66279667630078 19.803427652381746 22 20.776132241871828 25.712856708551477 27.0525495843975 26.458461465179195 23 15.768097587081789 32.72339072239042 25.526875815198736 25.981635875329058 24 17.616278336693362 26.05967079630644 39.727480200565154 16.59657066643504 25 14.217416217533902 26.98733368544782 37.897021924030135 20.898228172988148 26 13.620596175588378 38.90412072016285 28.190850720737252 19.284432383511515 27 15.32818797869941 38.80598164988519 30.40223709446709 15.463593276948318 28 12.579033123512328 31.29410479095187 40.901926776065 15.224935309470805 29 12.559419319316936 26.460282746997336 40.790478338654744 20.189819595030983 30 16.018733984978628 34.38208811361436 32.67967995875497 16.91949794265204 31 29.025067842747728 28.947943562679413 24.892859594582667 17.134128999990192 32 28.489050593807924 29.47646553644455 26.769200163074775 15.265283706672756 33 26.623777814826077 31.598609101085344 24.25358967641426 17.52402340767432 34 18.084557911858365 31.908367108771152 26.47373221273132 23.533342766639162 35 17.854726156268782 29.290834889595295 30.9992672843147 21.855171669821218 36 29.414191708124175 25.84756151379341 27.777769994522146 16.960476783560267 37 18.210716702415162 34.28184756431577 30.689088980824703 16.81834675244437 38 17.580763341239564 35.982574535958406 24.12161679389955 22.31504532890248 39 17.633300316762938 34.88833440975759 28.36022992982461 19.118135343654867 40 23.06828545930626 28.757129267578524 24.702885891090148 23.47169938202507 41 15.17632109478651 25.881885671135347 28.53009948401685 30.411693750061293 42 21.042809929628472 26.59575809454694 25.436512217298535 26.924919758526052 43 21.251907092211496 27.008068278454378 26.370549592803417 25.36947503653071 44 17.27226622096632 33.54871158321227 28.720283335411462 20.458738860409955 45 15.257508234295297 42.74009047567678 21.90616756072924 20.096233729298678 46 22.07897918555079 36.73630501146707 23.73193253411751 17.45278326886463 47 19.74843895133395 31.738707702481005 25.15554447219953 23.35730887398551 48 22.010050673664125 27.47326568438867 30.16512021160493 20.351563430342274 49 20.9902029048044 24.709540574656444 32.03655732904818 22.26369919149097 50 18.558091184575705 35.28096074016893 26.449495154689874 19.711452920565495 51 15.983639285329016 38.095401543606386 22.94268706315505 22.978272107909547 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1341.0 1 1548.5 2 1756.0 3 10235.0 4 18714.0 5 13204.0 6 7694.0 7 8276.5 8 8859.0 9 10693.0 10 12527.0 11 13990.5 12 15454.0 13 15432.0 14 15410.0 15 14143.0 16 12876.0 17 11697.0 18 10518.0 19 9461.0 20 8404.0 21 8292.0 22 8180.0 23 8362.0 24 8544.0 25 8618.5 26 8976.5 27 9260.0 28 11820.0 29 14380.0 30 17178.5 31 19977.0 32 22918.0 33 25859.0 34 28925.0 35 31991.0 36 34230.0 37 36469.0 38 46577.0 39 56685.0 40 81874.5 41 107064.0 42 137270.0 43 167476.0 44 168617.0 45 169758.0 46 156218.5 47 142679.0 48 135041.0 49 127403.0 50 118353.5 51 109304.0 52 97403.0 53 85502.0 54 71930.5 55 58359.0 56 50419.0 57 42479.0 58 35931.5 59 29384.0 60 24841.5 61 20299.0 62 17640.0 63 14981.0 64 11151.5 65 7322.0 66 6220.5 67 5119.0 68 4123.0 69 3127.0 70 2337.0 71 1547.0 72 1175.0 73 803.0 74 667.0 75 465.5 76 400.0 77 295.5 78 191.0 79 151.0 80 111.0 81 81.0 82 51.0 83 52.0 84 53.0 85 34.0 86 15.0 87 11.0 88 7.0 89 6.0 90 5.0 91 4.0 92 3.0 93 2.0 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1427566.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.498235774496656 #Duplication Level Percentage of deduplicated Percentage of total 1 80.92220839325691 20.63373549004217 2 8.35048624538979 4.258453342332805 3 2.94061638468586 2.249415896972041 4 1.4852655341857683 1.514866031136098 5 0.9066619345511095 1.1559139887472727 6 0.5480582623726399 0.8384711275283113 7 0.4571986342277719 0.8160430999922311 8 0.32165023801464815 0.6561210884656374 9 0.23740976852535972 0.5448177227725468 >10 2.1527951830127314 11.968659151604166 >50 0.7230584328676447 13.817598995485492 >100 0.9504465996671364 39.598180028458486 >500 0.0033155113941691697 0.5087880417887624 >1k 2.762926161807642E-4 0.07263368472503653 >5k 2.762926161807642E-4 0.3570392960101699 >10k+ 2.762926161807642E-4 1.0092630139387717 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14326 1.0035262817971287 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 5068 0.35500985593660817 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.004930069783113E-5 0.0 0.0 0.0562495884603584 0.0 2 7.004930069783113E-5 0.0 0.0 0.19473705593997054 0.0 3 7.004930069783113E-5 0.0 0.0 0.28447021013389223 0.0 4 7.004930069783113E-5 0.0 0.0 0.4420811367040123 0.0 5 7.004930069783113E-5 0.0 0.0 0.8043761199131949 0.0 6 7.004930069783113E-5 0.0 0.0 1.238681784239748 0.0 7 7.004930069783113E-5 0.0 0.0 1.5502610737437008 0.0 8 7.004930069783113E-5 0.0 0.0 2.2120168174361114 0.0 9 7.004930069783113E-5 0.0 0.0 2.442198819529185 0.0 10 7.004930069783113E-5 0.0 0.0 2.8492553058842813 0.0 11 7.004930069783113E-5 0.0 0.0 3.3751854555235976 0.0 12 7.004930069783113E-5 0.0 0.0 3.7658504055154016 0.0 13 7.004930069783113E-5 0.0 0.0 3.931306853763679 0.0 14 7.004930069783113E-5 0.0 0.0 3.9882569352310155 0.0 15 7.004930069783113E-5 0.0 0.0 4.081422505159131 0.0 16 7.004930069783113E-5 0.0 0.0 4.309362929629874 0.0 17 7.004930069783113E-5 0.0 0.0 4.57884258941443 0.0 18 7.004930069783113E-5 0.0 0.0 4.914448789057738 0.0 19 7.004930069783113E-5 0.0 0.0 5.097417562480474 0.0 20 7.004930069783113E-5 0.0 0.0 5.278424955483669 0.0 21 7.004930069783113E-5 0.0 0.0 5.550216242191254 0.0 22 7.004930069783113E-5 0.0 0.0 5.818995408968832 0.0 23 7.004930069783113E-5 0.0 0.0 6.145705347423517 0.0 24 7.004930069783113E-5 0.0 0.0 6.368672271544713 0.0 25 7.004930069783113E-5 0.0 0.0 6.568452877134928 0.0 26 7.004930069783113E-5 0.0 0.0 6.755834756501626 0.0 27 7.004930069783113E-5 0.0 0.0 6.941115156847389 0.0 28 7.004930069783113E-5 0.0 0.0 7.147760593905991 0.0 29 7.004930069783113E-5 0.0 0.0 7.35804859460088 0.0 30 7.004930069783113E-5 0.0 0.0 7.6163904155744815 0.0 31 7.004930069783113E-5 0.0 0.0 7.861352820114797 0.0 32 7.004930069783113E-5 0.0 0.0 8.07472299004039 0.0 33 7.004930069783113E-5 0.0 0.0 8.298740653672054 0.0 34 7.004930069783113E-5 0.0 0.0 8.533055564506299 0.0 35 7.004930069783113E-5 0.0 0.0 8.807298576738308 0.0 36 7.004930069783113E-5 0.0 0.0 9.042103832677439 0.0 37 7.004930069783113E-5 0.0 0.0 9.31662704211224 0.0 38 7.004930069783113E-5 0.0 0.0 9.568734475323733 0.0 39 7.004930069783113E-5 0.0 0.0 9.833240634758743 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGAAAT 30 2.1658725E-6 45.000004 6 TACGGAG 35 1.2122109E-7 45.000004 1 TCCTTAC 35 1.2122109E-7 45.000004 13 GTGCGTA 35 1.2122109E-7 45.000004 19 ATCGCCG 35 1.2122109E-7 45.000004 22 CGGACCG 30 2.1658725E-6 45.000004 16 GTGCAAC 20 7.033862E-4 45.0 43 CTAGACG 50 2.1827873E-11 45.0 1 GTCGCGA 20 7.033862E-4 45.0 1 TAGACGG 175 0.0 45.0 2 CGCATCA 20 7.033862E-4 45.0 20 GCTGCGC 20 7.033862E-4 45.0 23 TCCTCGA 20 7.033862E-4 45.0 27 TTGTACG 40 6.8175723E-9 45.0 1 GCGTTCC 20 7.033862E-4 45.0 10 ATGTACG 40 6.8175723E-9 45.0 1 AAACGTC 20 7.033862E-4 45.0 32 TGTTGCG 100 0.0 45.0 1 GCCGAAT 20 7.033862E-4 45.0 8 GTTCGCG 25 3.8912818E-5 45.0 1 >>END_MODULE