##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548127_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 4644084 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.19772618238602 31.0 31.0 33.0 30.0 34.0 2 31.573281404901376 31.0 31.0 34.0 30.0 34.0 3 31.485557754769292 31.0 31.0 34.0 30.0 34.0 4 35.39902680485538 37.0 35.0 37.0 33.0 37.0 5 35.30662106886955 37.0 35.0 37.0 33.0 37.0 6 35.37008891312043 37.0 35.0 37.0 33.0 37.0 7 35.81588274458429 37.0 35.0 37.0 35.0 37.0 8 35.830383343625996 37.0 35.0 37.0 35.0 37.0 9 37.57150710452266 39.0 37.0 39.0 35.0 39.0 10 36.91730209875618 39.0 37.0 39.0 32.0 39.0 11 36.57752120762674 39.0 35.0 39.0 32.0 39.0 12 36.23803251620772 38.0 35.0 39.0 32.0 39.0 13 36.10713156781833 38.0 35.0 39.0 31.0 39.0 14 37.09795537720679 39.0 35.0 41.0 31.0 41.0 15 37.27801994968222 39.0 35.0 41.0 32.0 41.0 16 37.32766160129748 39.0 35.0 41.0 32.0 41.0 17 37.17984773746556 39.0 35.0 41.0 32.0 41.0 18 36.99214355295899 39.0 35.0 40.0 31.0 41.0 19 36.81996815733738 38.0 35.0 40.0 31.0 41.0 20 36.593368896858884 38.0 35.0 40.0 31.0 41.0 21 36.4702972642183 38.0 35.0 40.0 31.0 41.0 22 36.411801121599005 38.0 35.0 40.0 31.0 41.0 23 36.333541555234575 38.0 35.0 40.0 31.0 41.0 24 36.17754093164551 38.0 35.0 40.0 30.0 41.0 25 36.06667364328466 38.0 35.0 40.0 30.0 41.0 26 36.01039968269308 38.0 35.0 40.0 30.0 41.0 27 35.96893144051658 38.0 35.0 40.0 30.0 41.0 28 35.94642517232677 38.0 35.0 40.0 30.0 41.0 29 35.913449455263944 38.0 35.0 40.0 30.0 41.0 30 35.76549605907214 38.0 34.0 40.0 29.0 41.0 31 35.56791651486063 38.0 34.0 40.0 29.0 41.0 32 35.29184269707439 38.0 34.0 40.0 27.0 41.0 33 35.000687326069034 38.0 34.0 40.0 25.0 41.0 34 34.65492893754721 38.0 34.0 40.0 23.0 41.0 35 34.35168183865753 37.0 33.0 40.0 22.0 41.0 36 34.14876324373117 37.0 33.0 40.0 21.0 41.0 37 34.06668139508243 37.0 33.0 40.0 21.0 41.0 38 33.9417738783364 37.0 33.0 40.0 20.0 41.0 39 33.88168065004854 37.0 33.0 40.0 19.0 41.0 40 33.77692328562532 37.0 33.0 40.0 18.0 41.0 41 33.68804138770961 37.0 33.0 40.0 18.0 41.0 42 33.63379602952918 37.0 33.0 40.0 18.0 41.0 43 33.53616622782878 37.0 33.0 40.0 18.0 41.0 44 33.38941802086267 37.0 32.0 40.0 18.0 41.0 45 33.31457096813925 36.0 32.0 40.0 18.0 41.0 46 33.21406826405379 36.0 32.0 40.0 18.0 41.0 47 33.18134749500655 36.0 32.0 40.0 18.0 41.0 48 33.062530522703725 36.0 32.0 40.0 18.0 41.0 49 32.96132498895369 36.0 31.0 40.0 18.0 41.0 50 32.836754675410695 35.0 31.0 40.0 17.0 41.0 51 32.512374883830695 35.0 31.0 39.0 17.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 1.0 10 2.0 11 4.0 12 10.0 13 20.0 14 65.0 15 211.0 16 493.0 17 1289.0 18 3019.0 19 5808.0 20 10132.0 21 15959.0 22 24304.0 23 36404.0 24 53451.0 25 79205.0 26 108625.0 27 124943.0 28 125513.0 29 127717.0 30 139434.0 31 161759.0 32 194276.0 33 242675.0 34 355564.0 35 452502.0 36 377456.0 37 447691.0 38 634482.0 39 920907.0 40 161.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.826420021687806 21.93696324183628 27.659469553091633 20.57714718338428 2 36.41785979754027 23.384137754614258 28.062240045615024 12.13576240223045 3 26.681774059211676 23.87495575015439 37.047047383294526 12.396222807339402 4 23.982555009771573 25.67332976750636 36.8434980934884 13.500617129233666 5 22.04236615875165 29.593801490240057 35.396280515167255 12.96755183584104 6 20.529839684208984 37.59787721324593 31.695507660929472 10.176775441615613 7 81.54387388341813 3.1422773576016283 13.649946900185267 1.6639018587949743 8 82.63603759105132 2.4203050590816186 13.321529067949674 1.6221282819173812 9 78.0448630989448 5.036450675741437 14.581669926728285 2.3370162985854694 10 37.76945033724627 33.383870748246586 19.494823952366065 9.351854962141081 11 27.24675092009533 23.499338082601433 33.90300433842282 15.350906658880417 12 27.044472063812798 21.556995954422874 34.82680330502205 16.571728676742282 13 22.407971087516938 25.437287525376373 34.97596081380095 17.178780573305737 14 16.845194875889412 28.918512240519334 36.61621968939407 17.62007319419718 15 16.769614847621188 26.30703923529376 41.38773114353659 15.535614773548453 16 21.365569615019883 25.206542345056636 38.46093223119995 14.966955808723528 17 20.882374220621333 24.765960305627548 34.398774871427825 19.9528906023233 18 20.723785357887582 25.626517522077553 36.584717244563194 17.064979875471675 19 22.79426900977674 26.890555812513295 33.53991874393314 16.77525643377682 20 23.55405285520245 27.707336904328173 32.9000939690152 15.838516271454179 21 22.80507846111311 25.98654546300196 35.33454605902907 15.873830016855853 22 21.459430966364952 23.328820064408827 36.20130471369596 19.010444255530263 23 18.60409932292353 26.616874285650304 36.03005458126942 18.74897181015675 24 19.09476658906256 25.650052841421473 37.79942395529452 17.45575661422145 25 19.46103903374702 26.992642682604362 35.25353977232108 18.29277851132753 26 18.167307051293648 29.922606912364202 33.473899266249276 18.436186770092874 27 17.294023966836086 28.931690296730206 35.848727111740445 17.925558624693267 28 16.490700857262702 27.873548368203505 37.66682514786554 17.96892562666825 29 18.17103222077809 26.367352528507237 37.42139461732389 18.04022063339078 30 19.048449597380237 27.071086569493573 36.31495468212892 17.56550915099727 31 21.781733491470007 26.366943405847092 33.96336069717947 17.887962405503433 32 22.6502147678638 27.103902513391233 33.19011886951226 17.0557638492327 33 21.60798555753944 27.731927329479827 32.76467436850841 17.89541274447232 34 19.20671546854019 28.498321735782557 33.84641621469379 18.448546580983464 35 19.167095168821234 29.097686432889674 33.250884350929056 18.48433404736004 36 21.580746601482662 29.341028284587445 31.2927156356345 17.785509478295396 37 20.348985935654913 30.690164088332594 31.203591494038434 17.757258481974056 38 19.996214538755115 31.171098541714574 29.72917802520368 19.10350889432663 39 19.753195678631137 30.100876728327915 30.305287328997494 19.840640264043458 40 21.40882895313694 28.21964460591152 30.29213080555821 20.07939563539333 41 18.59436651016648 28.294578651032154 30.977282064665495 22.133772774135867 42 19.85511028654951 28.682340801759832 30.18829978096865 21.274249130722012 43 19.956852632295195 28.649632521720108 30.172559324938998 21.2209555210457 44 19.436879264027095 29.732300277083706 30.55483061891215 20.275989839977054 45 18.95923932469783 30.68930277746914 29.97854905294564 20.372908844887387 46 20.384665738173556 29.742377614186132 30.295597581783618 19.57735906585669 47 19.496546574092974 29.032528266069264 31.1965287449581 20.27439641487966 48 19.732653414537722 28.06549149412457 32.213177022637836 19.988678068699876 49 20.330812276436 27.16613222327589 32.3274514414468 20.175604058841312 50 18.869253872238314 29.144240285059443 31.64443192672656 20.342073915975682 51 18.209640480232487 29.72736927239042 31.365819395170284 20.69717085220681 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 3597.0 1 5689.0 2 7781.0 3 81690.5 4 155600.0 5 104919.0 6 54238.0 7 53064.0 8 51890.0 9 53445.5 10 55001.0 11 55615.0 12 56229.0 13 55441.0 14 54653.0 15 51454.0 16 48255.0 17 44910.5 18 41566.0 19 38578.0 20 35590.0 21 35720.0 22 35850.0 23 37051.0 24 38252.0 25 42632.0 26 54489.5 27 61967.0 28 70944.0 29 79921.0 30 90534.5 31 101148.0 32 117159.5 33 133171.0 34 144039.5 35 154908.0 36 167598.0 37 180288.0 38 197357.0 39 214426.0 40 241722.0 41 269018.0 42 302358.5 43 335699.0 44 351714.0 45 367729.0 46 364175.5 47 360622.0 48 341453.5 49 322285.0 50 304826.5 51 287368.0 52 265509.5 53 243651.0 54 223640.0 55 203629.0 56 185322.5 57 167016.0 58 154997.5 59 142979.0 60 127884.5 61 112790.0 62 99291.5 63 85793.0 64 69486.5 65 53180.0 66 42285.5 67 31391.0 68 26256.5 69 21122.0 70 16775.0 71 12428.0 72 9716.5 73 7005.0 74 5587.5 75 3380.5 76 2591.0 77 1780.5 78 970.0 79 724.5 80 479.0 81 421.5 82 364.0 83 265.5 84 167.0 85 145.5 86 124.0 87 121.5 88 119.0 89 70.0 90 21.0 91 18.0 92 15.0 93 13.0 94 11.0 95 6.0 96 1.0 97 2.5 98 4.0 99 2.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 4644084.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.975412587297818 #Duplication Level Percentage of deduplicated Percentage of total 1 80.48010144591574 18.490635357874975 2 6.691755929406093 3.074917068232031 3 2.349263319068367 1.6192588209540122 4 1.3537425631959614 1.244111757056532 5 0.9302361819794951 1.0686280042305776 6 0.6985962672048152 0.9630322482586067 7 0.5556959574387699 0.8937140726674456 8 0.433112172666616 0.7960744690877178 9 0.3356312315623662 0.6940139420095431 >10 4.075368388974372 22.456472462257512 >50 1.4178858914575483 23.04359169045679 >100 0.6743291655667053 22.14675340003151 >500 0.0023786030907389307 0.35904647515534655 >1k 0.0017125942252266368 0.7456143817639914 >5k 9.514412362370205E-5 0.11826127430716801 >10k+ 9.514412362370205E-5 2.2858745756562953 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 104570 2.251681924788613 No Hit CGTTTCTGTCTCTTATACACATCTGACGCTATAGGACTCGTATGCCGTCTT 5410 0.1164922942823601 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCTATAGGACTCGTATGCCGTCT 4969 0.1069963420127629 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.306554317277638E-5 0.0 0.0 0.028315594636100467 0.0 2 4.306554317277638E-5 0.0 0.0 0.09274164722257393 0.0 3 4.306554317277638E-5 0.0 0.0 0.18074608469614245 0.0 4 4.306554317277638E-5 0.0 0.0 0.26190310080523954 0.0 5 4.306554317277638E-5 0.0 0.0 0.486748301710305 0.0 6 4.306554317277638E-5 0.0 0.0 0.9222916725881789 0.0 7 4.306554317277638E-5 0.0 0.0 1.2805754590140919 0.0 8 4.306554317277638E-5 0.0 0.0 1.8215002140357495 0.0 9 4.306554317277638E-5 0.0 0.0 2.1694482701001965 0.0 10 4.306554317277638E-5 0.0 0.0 2.5364958945617695 0.0 11 4.306554317277638E-5 0.0 0.0 2.817584694850481 0.0 12 4.306554317277638E-5 0.0 0.0 3.0392861111039333 0.0 13 4.306554317277638E-5 0.0 0.0 3.1650590299400267 0.0 14 6.459831475916457E-5 0.0 0.0 3.253537188388496 0.0 15 6.459831475916457E-5 0.0 0.0 3.3191690761838073 0.0 16 6.459831475916457E-5 0.0 0.0 3.41430086105247 0.0 17 8.613108634555276E-5 0.0 0.0 3.528338419373982 0.0 18 1.0766385793194093E-4 0.0 0.0 3.6721342680278823 0.0 19 1.0766385793194093E-4 0.0 0.0 3.76950546114153 0.0 20 1.0766385793194093E-4 0.0 0.0 3.872367511009706 0.0 21 1.0766385793194093E-4 0.0 0.0 3.989742648927108 0.0 22 1.0766385793194093E-4 0.0 0.0 4.130523909558914 0.0 23 1.0766385793194093E-4 0.0 0.0 4.275030339675165 0.0 24 1.0766385793194093E-4 0.0 0.0 4.394321894263756 0.0 25 1.0766385793194093E-4 0.0 0.0 4.502437940399011 0.0 26 1.0766385793194093E-4 0.0 0.0 4.602716057676821 0.0 27 1.0766385793194093E-4 0.0 0.0 4.714169683407966 0.0 28 1.0766385793194093E-4 0.0 0.0 4.83087730540619 0.0 29 1.0766385793194093E-4 0.0 0.0 4.967244347862787 0.0 30 1.0766385793194093E-4 0.0 0.0 5.136427334217038 0.0 31 1.0766385793194093E-4 0.0 0.0 5.284379007787112 0.0 32 1.0766385793194093E-4 0.0 0.0 5.432610607387808 0.0 33 1.0766385793194093E-4 0.0 0.0 5.577913750052756 0.0 34 1.0766385793194093E-4 0.0 0.0 5.734887654917525 0.0 35 1.0766385793194093E-4 0.0 0.0 5.902821740519767 0.0 36 1.0766385793194093E-4 0.0 0.0 6.068494885105437 0.0 37 1.0766385793194093E-4 0.0 0.0 6.233823505345726 0.0 38 1.0766385793194093E-4 0.0 0.0 6.435391780165905 0.0 39 1.0766385793194093E-4 0.0 0.0 6.728969587974722 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 48030 0.0 43.917866 1 CGGTCTA 495 0.0 41.363636 31 TCCGCGT 55 6.184564E-11 40.909092 42 CGACGGT 515 0.0 39.32039 28 CACGACG 520 0.0 38.942307 26 AGGGCGA 2575 0.0 38.79612 6 GACCGAT 1330 0.0 38.57143 9 GGGCGAT 4905 0.0 38.394493 7 GTTTTTT 56000 0.0 38.330357 2 TAGGGAC 5325 0.0 37.774647 5 TACGGGA 1940 0.0 37.46134 4 TAACGGG 1160 0.0 37.241383 3 GGACCGA 1635 0.0 37.155964 8 TAAGGGA 6050 0.0 36.892563 4 ATAGGGA 7185 0.0 36.670143 4 TTAGGGA 6660 0.0 36.587837 4 ACGGGAC 1710 0.0 36.57895 5 CGTAAGG 815 0.0 36.441715 2 TATGGGA 4625 0.0 36.291893 4 TAGGGAT 7870 0.0 36.222996 5 >>END_MODULE