##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548126_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2745834 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.102265468342225 31.0 31.0 33.0 30.0 34.0 2 31.47812067299043 31.0 31.0 34.0 30.0 34.0 3 31.4072970179552 31.0 31.0 34.0 30.0 34.0 4 35.31693867874023 37.0 35.0 37.0 33.0 37.0 5 35.206748842064016 37.0 35.0 37.0 32.0 37.0 6 35.27341383346553 37.0 35.0 37.0 32.0 37.0 7 35.741746587739826 37.0 35.0 37.0 35.0 37.0 8 35.749496509985676 37.0 35.0 37.0 35.0 37.0 9 37.4840194272487 39.0 37.0 39.0 35.0 39.0 10 36.74771963636549 39.0 37.0 39.0 32.0 39.0 11 36.4464137307645 39.0 35.0 39.0 32.0 39.0 12 35.95771557931033 37.0 35.0 39.0 31.0 39.0 13 35.76014901119296 38.0 35.0 39.0 30.0 39.0 14 36.7477061614067 39.0 35.0 41.0 31.0 41.0 15 36.975339004470044 39.0 35.0 41.0 31.0 41.0 16 37.06133728404558 39.0 35.0 41.0 32.0 41.0 17 36.92786708883349 38.0 35.0 41.0 31.0 41.0 18 36.76033183360684 38.0 35.0 40.0 31.0 41.0 19 36.572677372339335 38.0 35.0 40.0 31.0 41.0 20 36.3514695353033 38.0 35.0 40.0 31.0 41.0 21 36.18666787577108 38.0 35.0 40.0 30.0 41.0 22 36.11015997325403 38.0 35.0 40.0 30.0 41.0 23 36.05269546520292 37.0 34.0 40.0 30.0 41.0 24 35.85864986739912 37.0 34.0 40.0 30.0 41.0 25 35.73517699904656 37.0 34.0 40.0 30.0 41.0 26 35.65588232937606 37.0 34.0 40.0 30.0 41.0 27 35.608432993400186 37.0 34.0 40.0 29.0 41.0 28 35.57102541522904 37.0 34.0 40.0 29.0 41.0 29 35.53938329848054 37.0 34.0 40.0 29.0 41.0 30 35.41314223656638 37.0 34.0 40.0 29.0 41.0 31 35.19111825405323 37.0 34.0 40.0 27.0 41.0 32 34.89176075465596 37.0 34.0 40.0 25.0 41.0 33 34.60622783460326 37.0 33.0 40.0 24.0 41.0 34 34.269915807000714 37.0 33.0 40.0 23.0 41.0 35 33.95022022452923 37.0 33.0 40.0 21.0 41.0 36 33.706014274715805 36.0 33.0 40.0 19.0 41.0 37 33.586564956220954 36.0 33.0 40.0 18.0 41.0 38 33.470835818916946 36.0 33.0 40.0 18.0 41.0 39 33.41906976168261 36.0 32.0 40.0 18.0 41.0 40 33.29828205201043 36.0 32.0 40.0 18.0 41.0 41 33.21949214701253 36.0 32.0 40.0 18.0 41.0 42 33.164480445649666 36.0 32.0 40.0 18.0 41.0 43 33.06006444672183 35.0 32.0 40.0 17.0 41.0 44 32.91905191646691 35.0 32.0 40.0 17.0 41.0 45 32.848667836438764 35.0 31.0 40.0 17.0 41.0 46 32.74565723929415 35.0 31.0 40.0 17.0 41.0 47 32.712637763244246 35.0 31.0 40.0 17.0 41.0 48 32.58432738468531 35.0 31.0 40.0 15.0 41.0 49 32.47375332958948 35.0 31.0 39.0 15.0 41.0 50 32.32366960275093 35.0 31.0 39.0 15.0 41.0 51 31.997103248047768 35.0 30.0 39.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 5.0 12 11.0 13 14.0 14 42.0 15 135.0 16 413.0 17 1071.0 18 2349.0 19 4512.0 20 7648.0 21 11891.0 22 17881.0 23 25797.0 24 36509.0 25 52713.0 26 70065.0 27 76908.0 28 77065.0 29 79040.0 30 87385.0 31 102155.0 32 121381.0 33 151090.0 34 224837.0 35 291880.0 36 221147.0 37 254445.0 38 345251.0 39 482108.0 40 84.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.665801355799367 22.610070382987463 27.3283454134518 19.39578284776137 2 35.80475003223064 23.706385746552776 27.645334714334513 12.843529506882062 3 26.171028547246483 23.525857717545925 37.16477398123848 13.138339753969102 4 24.16085604592266 25.66593610538729 36.14493811352034 14.028269735169715 5 21.69799776679872 30.19155564393186 35.0205802681444 13.08986632112502 6 20.804680836496306 37.88692251607344 31.571100073784503 9.737296573645748 7 81.4329635367615 3.6264391802272096 12.979735847105106 1.9608614359061762 8 82.47020759448678 2.882839967747504 12.906315531091828 1.740636906673892 9 77.87717684317406 5.238117089379766 14.280542815042715 2.6041632524034592 10 40.09656082632817 29.060059712276853 20.7139980057061 10.129381455688872 11 32.84736076543593 22.449026416017865 29.944963898036082 14.758648920510126 12 29.05124636085066 20.72241075024929 33.52912084270207 16.697222046197986 13 21.43479904466184 29.284144635109044 32.8998402671101 16.381216053119015 14 17.278393377021334 31.60635347948929 34.559408908186 16.555844235303372 15 16.24897936291852 25.904042269124787 42.54863913841842 15.298339229538275 16 19.77748836965381 23.473633147524577 40.37658503755143 16.37229344527018 17 19.316681197770876 23.99037960779858 33.239518485094145 23.4534207093364 18 20.814805264994167 25.504892138417688 36.161945696644445 17.518356899943697 19 23.751763580755426 27.049705116915295 31.66746423855193 17.531067063777346 20 24.973650992740275 26.27970226896455 31.684945266174136 17.061701472121037 21 21.6991631686402 27.260169405725183 34.07718747746586 16.963479948168754 22 21.531928004387737 23.75223702525353 33.712234607044714 21.003600363314025 23 18.819455218341677 27.77487641277659 33.417169428304845 19.98849894057689 24 18.76318816068269 26.23374173384116 37.48755387252106 17.51551623295509 25 17.965907625879787 27.690931061382447 35.74218252086616 18.600978791871615 26 17.7383629163307 31.157564514096624 32.041230460399284 19.06284210917339 27 17.750344704013425 29.97883338905411 34.37567602411507 17.89514588281739 28 16.809683323900863 27.44084310996222 37.904585637733376 17.844887928403537 29 17.317434338710935 26.09331081194275 37.591930174948665 18.99732467439765 30 18.58520944820408 28.138627462548722 35.249363217150055 18.02679987209715 31 22.719581737279093 26.671605056969938 32.231008866522885 18.37780433922808 32 23.326574002652745 27.066384930771488 32.08252938815675 17.524511678419017 33 22.752249407648094 27.602870384735567 31.14070260620271 18.504177601413634 34 19.210848143041424 28.198390725732146 32.38684494401337 20.203916187213064 35 19.69591024075017 28.580278341662314 32.619342611388745 19.10446880619877 36 23.933493430411307 27.703204199525537 30.52231125406707 17.84099111599609 37 19.705706899980115 31.594699461074487 30.65152518324123 18.04806845570417 38 20.14229556484478 31.88313641684093 28.14460014698631 19.829967871327984 39 20.23392528463119 30.671555527391675 29.503240181307394 19.59127900666974 40 21.711727657243664 28.872721366258848 28.671835223833632 20.743715752663856 41 18.67625646706975 27.44364735814328 30.37885757114232 23.501238603644648 42 20.672662659141082 27.670645785579172 28.927167483540522 22.729524071739224 43 20.121682519773593 28.65238758060393 29.5553554949061 21.67057440471638 44 19.577403440994612 30.602214117823586 30.11008677145086 19.710295669730947 45 18.77039908457685 32.96972795879139 27.851355908623752 20.408517048008 46 20.800638348858673 31.061236768136745 28.245407406274374 19.892717476730205 47 20.172413918685546 29.45873639848585 29.583106626256356 20.785743056572247 48 20.906034377897573 28.349492358241612 30.838863529259235 19.905609734601583 49 20.100632449011847 27.444994854022493 31.556860320033913 20.897512376931747 50 19.20822598889809 30.76639010224216 30.062013945489785 19.963369963369964 51 18.587904439962504 31.563852731082797 28.716302587847625 21.131940241107074 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2060.0 1 3332.5 2 4605.0 3 39005.5 4 73406.0 5 50564.0 6 27722.0 7 27970.5 8 28219.0 9 30156.5 10 32094.0 11 33759.5 12 35425.0 13 35280.5 14 35136.0 15 33373.0 16 31610.0 17 28696.0 18 25782.0 19 23940.5 20 22099.0 21 22390.0 22 22681.0 23 22974.0 24 23267.0 25 24605.5 26 28182.5 27 30421.0 28 35034.5 29 39648.0 30 48796.0 31 57944.0 32 65994.5 33 74045.0 34 79215.0 35 84385.0 36 93302.0 37 102219.0 38 112331.5 39 122444.0 40 140270.5 41 158097.0 42 180475.5 43 202854.0 44 210638.5 45 218423.0 46 218562.0 47 218701.0 48 211266.5 49 203832.0 50 187756.0 51 171680.0 52 158121.0 53 144562.0 54 130967.5 55 117373.0 56 106663.5 57 95954.0 58 89733.5 59 83513.0 60 72850.5 61 62188.0 62 56435.5 63 50683.0 64 45406.0 65 40129.0 66 34311.0 67 28493.0 68 23581.5 69 18670.0 70 15194.0 71 11718.0 72 9707.5 73 7697.0 74 6310.5 75 3860.0 76 2796.0 77 1999.5 78 1203.0 79 887.5 80 572.0 81 418.5 82 265.0 83 257.0 84 249.0 85 148.5 86 48.0 87 41.0 88 34.0 89 23.5 90 13.0 91 9.0 92 5.0 93 3.0 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2745834.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.44821485590502 #Duplication Level Percentage of deduplicated Percentage of total 1 80.56501188369451 20.502357322847992 2 7.028138711638523 3.577071679417613 3 2.6817708885884577 2.047388453013312 4 1.4419844713960197 1.4678372258785815 5 1.014060736098753 1.2903017744589134 6 0.6860253242405688 1.047487190871954 7 0.5182932801621024 0.9232747126355869 8 0.3825522095957711 0.7788216658715514 9 0.3137944835460608 0.7186958494090118 >10 3.6191029910598265 21.613476359565446 >50 1.1503235238103988 20.85284429036879 >100 0.59545519564535 22.16285023157788 >500 0.0020336753055084414 0.3649724133141512 >1k 0.0013073626963982837 0.7369315364547355 >5k 0.0 0.0 >10k+ 1.4526252182203155E-4 1.915689294314387 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 51822 1.8872954446627146 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 4804 0.1749559514522728 No Hit GCTCAACTTGACCCTGCATTAGAAATTGAAGACTGTAAATACAAAATAAAA 4050 0.1474961705623865 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.026185122625766888 0.0 2 0.0 0.0 0.0 0.08052198348479915 0.0 3 0.0 0.0 0.0 0.1491350169019686 0.0 4 0.0 0.0 0.0 0.22131709345867231 0.0 5 0.0 0.0 0.0 0.42260384276689705 0.0 6 3.6418807546268275E-5 0.0 0.0 0.7853715847352754 0.0 7 3.6418807546268275E-5 0.0 0.0 1.084807020380693 0.0 8 3.6418807546268275E-5 0.0 0.0 1.5305368059394704 0.0 9 3.6418807546268275E-5 0.0 0.0 1.7833925867332112 0.0 10 3.6418807546268275E-5 0.0 0.0 2.079550329699465 0.0 11 3.6418807546268275E-5 0.0 0.0 2.340928111459032 0.0 12 3.6418807546268275E-5 0.0 0.0 2.54589316032943 0.0 13 3.6418807546268275E-5 0.0 0.0 2.656679172885178 0.0 14 3.6418807546268275E-5 0.0 0.0 2.7091222557518044 0.0 15 3.6418807546268275E-5 0.0 0.0 2.7710706473880067 0.0 16 3.6418807546268275E-5 0.0 0.0 2.8716593938307997 0.0 17 3.6418807546268275E-5 0.0 0.0 2.9975956303257956 0.0 18 3.6418807546268275E-5 0.0 0.0 3.155580417461507 0.0 19 3.6418807546268275E-5 0.0 0.0 3.2479020945912973 0.0 20 3.6418807546268275E-5 0.0 0.0 3.350129687373672 0.0 21 3.6418807546268275E-5 0.0 0.0 3.4763572743290383 0.0 22 3.6418807546268275E-5 0.0 0.0 3.6161326576916157 0.0 23 3.6418807546268275E-5 0.0 0.0 3.774335957672605 3.6418807546268275E-5 24 3.6418807546268275E-5 0.0 0.0 3.892514988160246 3.6418807546268275E-5 25 3.6418807546268275E-5 0.0 0.0 4.009382941576221 3.6418807546268275E-5 26 3.6418807546268275E-5 0.0 0.0 4.111974722434058 3.6418807546268275E-5 27 3.6418807546268275E-5 0.0 0.0 4.221741008378511 3.6418807546268275E-5 28 3.6418807546268275E-5 0.0 0.0 4.343671176043417 3.6418807546268275E-5 29 3.6418807546268275E-5 0.0 0.0 4.476199216704288 3.6418807546268275E-5 30 7.283761509253655E-5 0.0 0.0 4.629522396474076 3.6418807546268275E-5 31 7.283761509253655E-5 0.0 0.0 4.772138446825263 3.6418807546268275E-5 32 7.283761509253655E-5 0.0 0.0 4.9157742237877455 3.6418807546268275E-5 33 7.283761509253655E-5 0.0 0.0 5.062833368659577 3.6418807546268275E-5 34 7.283761509253655E-5 0.0 0.0 5.21757688192367 3.6418807546268275E-5 35 7.283761509253655E-5 0.0 0.0 5.38211705441771 3.6418807546268275E-5 36 7.283761509253655E-5 0.0 0.0 5.536751311259166 3.6418807546268275E-5 37 7.283761509253655E-5 0.0 0.0 5.703731543858805 3.6418807546268275E-5 38 7.283761509253655E-5 0.0 0.0 5.89048718895607 3.6418807546268275E-5 39 7.283761509253655E-5 0.0 0.0 6.133364216482133 3.6418807546268275E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 27045 0.0 43.985027 1 TAATGCG 110 0.0 42.954544 1 TCGTTAG 70 0.0 41.785713 1 TCACGAC 500 0.0 40.95 25 CGACGGT 500 0.0 40.95 28 ATCCGTT 55 6.184564E-11 40.909092 10 GGGCGAT 2535 0.0 40.29586 7 CGGTCTA 510 0.0 40.14706 31 CTCACGA 510 0.0 39.705883 24 ATTAGCG 170 0.0 39.705883 1 CGTTAGG 320 0.0 39.375 2 ACGGGAT 1055 0.0 39.24171 5 TACGGGA 1155 0.0 39.155846 4 TAATACG 115 0.0 39.130432 1 TTACGGG 840 0.0 39.10714 3 TGCACGG 275 0.0 38.454544 2 ACGGTCT 535 0.0 38.271027 30 GTTTTTT 32075 0.0 37.97116 2 ACGTAGG 320 0.0 37.96875 2 TAGGGAT 3210 0.0 37.92056 5 >>END_MODULE