##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548125_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1633841 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.49121242519927 31.0 31.0 33.0 30.0 34.0 2 31.900604159156245 31.0 31.0 34.0 30.0 34.0 3 32.010865194348774 33.0 31.0 34.0 30.0 34.0 4 35.718897983341094 37.0 35.0 37.0 35.0 37.0 5 35.61046699158609 37.0 35.0 37.0 33.0 37.0 6 35.66867645015641 37.0 35.0 37.0 33.0 37.0 7 36.05145604743669 37.0 35.0 37.0 35.0 37.0 8 36.083490988413196 37.0 35.0 37.0 35.0 37.0 9 37.90588863910258 39.0 38.0 39.0 35.0 39.0 10 37.27064689893325 39.0 37.0 39.0 34.0 39.0 11 36.961049453404584 39.0 37.0 39.0 33.0 39.0 12 36.3892765575108 38.0 35.0 39.0 32.0 39.0 13 36.146710726441555 38.0 35.0 39.0 32.0 39.0 14 37.131415480453725 39.0 35.0 41.0 32.0 41.0 15 37.346911357959556 39.0 35.0 41.0 32.0 41.0 16 37.48098988824494 39.0 35.0 41.0 33.0 41.0 17 37.42139045353863 39.0 35.0 41.0 32.0 41.0 18 37.34537020432221 39.0 35.0 41.0 32.0 41.0 19 37.30491339120514 39.0 35.0 41.0 32.0 41.0 20 37.19072541330521 39.0 35.0 41.0 32.0 41.0 21 37.066028456869425 39.0 35.0 41.0 32.0 41.0 22 37.00689724397907 39.0 35.0 41.0 32.0 41.0 23 36.91372722315084 39.0 35.0 41.0 31.0 41.0 24 36.94790496749684 39.0 35.0 41.0 32.0 41.0 25 36.93950880165206 39.0 35.0 41.0 32.0 41.0 26 36.82545241550432 39.0 35.0 41.0 31.0 41.0 27 36.782776292185105 39.0 35.0 41.0 31.0 41.0 28 36.72886774172028 38.0 35.0 41.0 31.0 41.0 29 36.69747117375559 38.0 35.0 41.0 31.0 41.0 30 36.616913763334374 38.0 35.0 41.0 31.0 41.0 31 36.56183067997437 38.0 35.0 41.0 31.0 41.0 32 36.47622137037815 38.0 35.0 41.0 30.0 41.0 33 36.390564932573 38.0 35.0 41.0 30.0 41.0 34 36.273427463259885 38.0 35.0 41.0 30.0 41.0 35 36.19508140633024 38.0 35.0 41.0 30.0 41.0 36 36.05611072313646 38.0 35.0 41.0 30.0 41.0 37 35.99347366114573 38.0 35.0 41.0 29.0 41.0 38 35.887894844112736 38.0 35.0 40.0 29.0 41.0 39 35.83364660331085 38.0 35.0 40.0 29.0 41.0 40 35.692547806059466 38.0 35.0 40.0 28.0 41.0 41 35.612147693686225 38.0 35.0 40.0 28.0 41.0 42 35.57303556466021 38.0 35.0 40.0 28.0 41.0 43 35.48422949356761 38.0 34.0 40.0 27.0 41.0 44 35.32197013050842 38.0 34.0 40.0 27.0 41.0 45 35.30509517143957 38.0 34.0 40.0 27.0 41.0 46 35.22222603056234 38.0 34.0 40.0 27.0 41.0 47 35.13521817606487 38.0 34.0 40.0 27.0 41.0 48 35.00586164749201 37.0 34.0 40.0 26.0 41.0 49 34.92013849572878 37.0 34.0 40.0 26.0 41.0 50 34.749265687420014 37.0 34.0 40.0 26.0 41.0 51 34.392635513492436 36.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 3.0 12 3.0 13 10.0 14 14.0 15 41.0 16 128.0 17 295.0 18 611.0 19 1139.0 20 2089.0 21 3309.0 22 5039.0 23 7503.0 24 10496.0 25 14886.0 26 19648.0 27 23778.0 28 26968.0 29 31879.0 30 38022.0 31 46764.0 32 57785.0 33 74533.0 34 124635.0 35 184968.0 36 111797.0 37 148151.0 38 238726.0 39 460547.0 40 72.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.735498741921646 24.151187294234873 30.399347304909107 12.713966658934375 2 29.653619905486515 25.742345797418476 31.027560209347175 13.576474087747828 3 29.418223682720658 24.97990930574028 31.65240681314767 13.949460198391398 4 25.99273735938809 27.632248180820536 31.498413860345035 14.876600599446336 5 24.127868011636384 31.593771976587686 29.87402078904863 14.404339222727302 6 21.94448541810372 40.93409334200819 26.408750912726514 10.712670327161577 7 90.68373238277164 3.178644678398938 4.757929321151813 1.3796936176776076 8 91.74729976784766 2.3005298557203546 4.414383039720511 1.537787336711467 9 86.67483555621386 4.920368628281454 6.118832860725125 2.2859629547795657 10 42.509154807597554 32.60292770226723 13.908697357943645 10.979220132191566 11 34.81213900251004 24.648726528468803 24.248748807258476 16.29038566176268 12 34.52361643513659 21.998101406440405 25.82068879407482 17.657593364348184 13 25.507745245712403 29.27347275530483 26.317248740850545 18.901533258132215 14 18.345787625601268 33.05615417901742 28.22563517502621 20.3724230203551 15 17.168133251644438 28.323992359109607 37.099326066612356 17.4085483226336 16 23.130402529989148 26.01538338185907 34.390433340820806 16.463780747330983 17 23.557494272698506 25.561483644981365 25.942426466222845 24.93859561609728 18 23.88586159852764 27.856321392350907 29.916803409878927 18.34101359924252 19 26.96002854622941 28.184199074450937 25.9031325569624 18.952639822357256 20 28.65945951901072 28.213822520061623 26.11410779873929 17.012610162188366 21 26.02438058538132 27.050429019714894 29.25951790902542 17.66567248587837 22 24.261724366079687 23.644528445546413 29.533595986390353 22.560151201983548 23 21.274346769361276 27.2275576387176 29.715743453616355 21.782352138304766 24 21.272020961648042 26.104804567886347 33.19631469647291 19.426859773992696 25 20.46961730058188 28.644647796205387 30.77655659271618 20.109178310496553 26 19.918584488943537 33.51476673678773 26.1275730012896 20.439075772979134 27 19.65913451798553 32.797010235390104 29.05962085661946 18.484234390004904 28 16.647029912947463 29.903950261989998 34.01744723017723 19.431572594885303 29 19.002950715522502 27.14584834142368 33.07947346161591 20.771727481437914 30 20.20949406949636 29.055152857591406 30.519187607606863 20.216165465305373 31 24.894527680478088 27.69486137267947 27.422252226501843 19.988358720340596 32 25.976823938192272 26.69972169874547 28.104754379404117 19.21869998365814 33 24.58678659673738 27.718915120871614 27.80723460850842 19.887063673882587 34 19.808414649895553 28.51960502888592 29.471350027328242 22.200630293890285 35 20.44948070222255 27.261832699754752 29.544062121099913 22.744624476922784 36 24.666904551911724 26.65149179142891 28.57615887959722 20.10544477706215 37 20.332700672831688 30.29695056006062 29.32586463431876 20.04448413278893 38 20.42683467975158 30.275467441446263 26.855305993667685 22.442391885134477 39 20.7770523569919 29.096344136302125 28.854154106794972 21.272449399911007 40 22.754233735106418 27.401136340684314 28.00921264676306 21.835417277446215 41 19.540518324610535 26.155911132111388 28.56018425293526 25.74338629034282 42 21.43696969288933 26.125430809974777 27.71481435464038 24.722785142495507 43 21.38402696468016 26.263449136115447 28.5915214515978 23.76100244760659 44 20.31293130726919 28.381709113677523 29.22842553222743 22.076934046825855 45 19.476313790632013 31.040229740837695 26.416585212392146 23.066871256138143 46 21.586923084926866 29.539349300207302 27.570491865487522 21.303235749378306 47 20.756364909437334 27.62502593581628 28.862110817392878 22.756498337353513 48 20.90411490469391 27.02631406605661 30.918002424960566 21.15156860428891 49 21.35721897051182 25.198167997987564 30.897192566473723 22.54742046502689 50 20.29775235166702 29.01004442904787 28.762284702122177 21.929918517162932 51 19.230145405825905 29.999430789164922 27.720567668457335 23.049856136551846 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 792.0 1 1717.5 2 2643.0 3 5918.0 4 9193.0 5 6879.0 6 4565.0 7 4332.0 8 4099.0 9 4296.0 10 4493.0 11 4468.0 12 4443.0 13 4381.5 14 4320.0 15 4354.0 16 4388.0 17 4265.5 18 4143.0 19 4189.0 20 4235.0 21 5237.0 22 6239.0 23 6608.5 24 6978.0 25 9574.5 26 15015.5 27 17860.0 28 20031.5 29 22203.0 30 26792.0 31 31381.0 32 36972.5 33 42564.0 34 48874.5 35 55185.0 36 58328.5 37 61472.0 38 69015.5 39 76559.0 40 92477.0 41 108395.0 42 124584.0 43 140773.0 44 143735.0 45 146697.0 46 146475.0 47 146253.0 48 144127.5 49 142002.0 50 136665.0 51 131328.0 52 118699.5 53 106071.0 54 95359.0 55 84647.0 56 77376.0 57 70105.0 58 63379.5 59 56654.0 60 49776.0 61 42898.0 62 36808.0 63 30718.0 64 24505.0 65 18292.0 66 15452.0 67 12612.0 68 10122.0 69 7632.0 70 5764.0 71 3896.0 72 3092.0 73 2288.0 74 1793.5 75 980.5 76 662.0 77 523.0 78 384.0 79 259.5 80 135.0 81 120.0 82 105.0 83 70.0 84 35.0 85 26.0 86 17.0 87 13.0 88 9.0 89 5.5 90 2.0 91 2.0 92 2.0 93 2.0 94 2.0 95 1.5 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1633841.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.469643208119642 #Duplication Level Percentage of deduplicated Percentage of total 1 80.83999379644091 17.356058237561914 2 7.399209274779035 3.1771676630343118 3 2.3001104363042666 1.4814765122017501 4 1.1219029804037262 0.9634742681357616 5 0.6650347507735221 0.7139029410054144 6 0.4413802875212136 0.568576637530663 7 0.3453599262373457 0.5190328076288832 8 0.2730409623857914 0.46896736348996443 9 0.2263868981369158 0.4374401336993257 >10 3.580445332174542 19.996292748668058 >50 1.975910887874453 30.764081065814963 >100 0.8280813012286862 22.752878688822996 >500 0.0025716810596710694 0.35324098297401874 >1k 2.8574233996345215E-4 0.12410672256971864 >5k 2.8574233996345215E-4 0.3233032268622923 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5270 0.322552806546047 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2023 0.12381865799670838 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.120546613776983E-5 0.0 0.0 0.05894086389067235 0.0 2 6.120546613776983E-5 0.0 0.0 0.20607880448587101 0.0 3 6.120546613776983E-5 0.0 0.0 0.29243971720626427 0.0 4 6.120546613776983E-5 0.0 0.0 0.44269913657448917 0.0 5 6.120546613776983E-5 0.0 0.0 0.7579072871840038 0.0 6 6.120546613776983E-5 0.0 0.0 1.0158883269547037 0.0 7 6.120546613776983E-5 0.0 0.0 1.18175514018806 0.0 8 6.120546613776983E-5 0.0 0.0 1.5246281614918464 0.0 9 6.120546613776983E-5 0.0 0.0 1.6311868780377037 0.0 10 6.120546613776983E-5 0.0 0.0 1.878701783098845 0.0 11 6.120546613776983E-5 0.0 0.0 2.2788631207075842 0.0 12 6.120546613776983E-5 0.0 0.0 2.5840947803366423 0.0 13 6.120546613776983E-5 0.0 0.0 2.6997119058708896 0.0 14 6.120546613776983E-5 0.0 0.0 2.752226195817096 0.0 15 6.120546613776983E-5 0.0 0.0 2.8406680943861735 0.0 16 6.120546613776983E-5 0.0 0.0 3.0377496953497922 0.0 17 6.120546613776983E-5 0.0 0.0 3.2706364940040067 0.0 18 6.120546613776983E-5 0.0 0.0 3.5232314527545827 0.0 19 6.120546613776983E-5 0.0 0.0 3.692280950227103 0.0 20 1.2241093227553966E-4 0.0 0.0 3.8724086370705595 0.0 21 1.2241093227553966E-4 0.0 0.0 4.109885845685106 0.0 22 1.2241093227553966E-4 0.0 0.0 4.368846172914011 0.0 23 1.2241093227553966E-4 0.0 0.0 4.613851653863503 0.0 24 1.2241093227553966E-4 0.0 0.0 4.796121532021782 0.0 25 1.2241093227553966E-4 0.0 0.0 4.9701898777175995 0.0 26 1.2241093227553966E-4 0.0 0.0 5.13923937519012 0.0 27 1.2241093227553966E-4 0.0 0.0 5.323039390001842 0.0 28 1.2241093227553966E-4 0.0 0.0 5.504391186168054 0.0 29 1.2241093227553966E-4 0.0 0.0 5.711816510908957 0.0 30 1.2241093227553966E-4 0.0 0.0 5.956699580926173 0.0 31 1.2241093227553966E-4 0.0 0.0 6.1681032609660305 0.0 32 1.2241093227553966E-4 0.0 0.0 6.356432480271948 0.0 33 1.2241093227553966E-4 0.0 0.0 6.555839888948802 0.0 34 1.2241093227553966E-4 0.0 0.0 6.756838639745238 0.0 35 1.2241093227553966E-4 0.0 0.0 6.989603027467177 0.0 36 1.2241093227553966E-4 0.0 0.0 7.202598049626616 0.0 37 1.2241093227553966E-4 0.0 0.0 7.427895370479747 0.0 38 1.2241093227553966E-4 0.0 0.0 7.690099587413953 0.0 39 1.2241093227553966E-4 0.0 0.0 8.067064053356477 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGCGAC 35 1.2123564E-7 45.000004 9 CATCGTA 30 2.1660653E-6 45.000004 32 GCGAACT 25 3.8915307E-5 45.0 12 TACGCGT 20 7.03416E-4 45.0 22 CGTACGA 20 7.03416E-4 45.0 12 GACGCGT 20 7.03416E-4 45.0 28 TCACGAC 445 0.0 42.471912 25 GATTACG 70 0.0 41.785717 1 CACGACG 455 0.0 41.538464 26 TATTGCG 110 0.0 40.909092 1 TGTAGCG 110 0.0 40.909092 1 CGTTTTT 2760 0.0 40.434784 1 CGTTAGG 325 0.0 40.153843 2 CGCAATC 45 1.9292202E-8 40.0 20 TATCCGG 45 1.9292202E-8 40.0 2 CGGTCTA 465 0.0 39.67742 31 CTCACGA 485 0.0 38.96907 24 CGTAAGG 180 0.0 38.75 2 ACGGGTA 215 0.0 38.720932 5 TCTCACG 495 0.0 38.636364 23 >>END_MODULE