##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548124_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2262138 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.53486922548492 31.0 31.0 33.0 30.0 34.0 2 31.95085799363257 31.0 31.0 34.0 30.0 34.0 3 32.0124806709405 33.0 31.0 34.0 30.0 34.0 4 35.72888347218428 37.0 35.0 37.0 35.0 37.0 5 35.6358586434603 37.0 35.0 37.0 33.0 37.0 6 35.69960409135075 37.0 35.0 37.0 33.0 37.0 7 36.095429191322545 37.0 35.0 37.0 35.0 37.0 8 36.1339591130161 37.0 35.0 37.0 35.0 37.0 9 37.96011693362651 39.0 38.0 39.0 35.0 39.0 10 37.367181400957854 39.0 37.0 39.0 34.0 39.0 11 36.99618414084375 39.0 37.0 39.0 33.0 39.0 12 36.63693063818388 39.0 35.0 39.0 33.0 39.0 13 36.509124553851265 39.0 35.0 39.0 32.0 39.0 14 37.58867186705674 40.0 36.0 41.0 33.0 41.0 15 37.750283581284606 40.0 36.0 41.0 33.0 41.0 16 37.82717102139657 40.0 36.0 41.0 33.0 41.0 17 37.76222936001252 40.0 36.0 41.0 33.0 41.0 18 37.65954817964244 39.0 36.0 41.0 33.0 41.0 19 37.62162255353122 39.0 36.0 41.0 33.0 41.0 20 37.51471218820426 39.0 35.0 41.0 32.0 41.0 21 37.403325968619065 39.0 35.0 41.0 32.0 41.0 22 37.3350299583845 39.0 35.0 41.0 32.0 41.0 23 37.24035271057734 39.0 35.0 41.0 32.0 41.0 24 37.263837573127724 39.0 35.0 41.0 32.0 41.0 25 37.26235844143903 39.0 35.0 41.0 32.0 41.0 26 37.14545620116898 39.0 35.0 41.0 32.0 41.0 27 37.08948083627082 39.0 35.0 41.0 32.0 41.0 28 37.04459895903786 39.0 35.0 41.0 32.0 41.0 29 36.99137187916917 39.0 35.0 41.0 31.0 41.0 30 36.89765390086723 39.0 35.0 41.0 31.0 41.0 31 36.82809404200805 39.0 35.0 41.0 31.0 41.0 32 36.728238065051734 39.0 35.0 41.0 31.0 41.0 33 36.606249928165305 39.0 35.0 41.0 30.0 41.0 34 36.499347519912575 39.0 35.0 41.0 30.0 41.0 35 36.36019155330046 39.0 35.0 41.0 30.0 41.0 36 36.20581149337485 39.0 35.0 41.0 30.0 41.0 37 36.14855680776328 39.0 35.0 41.0 30.0 41.0 38 36.06042425351592 39.0 35.0 41.0 29.0 41.0 39 36.00403202633969 39.0 35.0 41.0 29.0 41.0 40 35.89337432110685 38.0 35.0 41.0 29.0 41.0 41 35.81250834387646 38.0 35.0 40.0 28.0 41.0 42 35.767194574336315 38.0 35.0 40.0 28.0 41.0 43 35.6685065190541 38.0 35.0 40.0 27.0 41.0 44 35.50665520847976 38.0 34.0 40.0 27.0 41.0 45 35.48363185623512 38.0 34.0 40.0 27.0 41.0 46 35.39015524251836 38.0 34.0 40.0 27.0 41.0 47 35.2934051768725 38.0 34.0 40.0 26.0 41.0 48 35.16547310553114 38.0 34.0 40.0 26.0 41.0 49 35.060955167191395 38.0 34.0 40.0 26.0 41.0 50 34.92564423567439 38.0 34.0 40.0 25.0 41.0 51 34.55222227821645 37.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 1.0 12 3.0 13 4.0 14 16.0 15 32.0 16 91.0 17 252.0 18 596.0 19 1211.0 20 2377.0 21 3860.0 22 6288.0 23 9605.0 24 13942.0 25 20447.0 26 27484.0 27 32573.0 28 36543.0 29 41289.0 30 49586.0 31 59680.0 32 75081.0 33 95778.0 34 153460.0 35 220979.0 36 157550.0 37 212408.0 38 346430.0 39 694463.0 40 108.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.822390145959268 24.751628768890317 31.422220925513827 13.00376015963659 2 29.841415510459573 26.148360533265436 30.712670933426693 13.297553022848296 3 29.099329925937322 25.419846180913808 31.764994001250145 13.715829891898727 4 25.995628913885888 27.176547142570435 32.35890118109505 14.46892276244862 5 23.86127636775475 31.45099901067044 30.121018257948894 14.566706363625915 6 22.401993158684395 40.745745838671205 26.401439699965255 10.450821302679147 7 90.42273283062306 2.7476219399523814 5.447766670291556 1.3818785591329972 8 91.21786557672432 2.017295142913474 5.224703355851854 1.5401359245103525 9 86.00072144139747 5.266920055275142 6.570421433175164 2.161937070152219 10 40.17774335606404 39.78992439895356 11.741900803576085 8.290431441406316 11 28.357421165287 23.27364643536336 30.800950251487752 17.56798214786189 12 29.434366957276698 22.278835331885148 29.635062051917256 18.6517356589209 13 24.318896548309606 26.758447097391937 30.28714428562714 18.63551206867132 14 17.688266586742277 30.86235234101545 31.134528485883706 20.31485258635857 15 16.62820747452189 29.185266327695302 37.03156040878143 17.154965789001377 16 21.985705558193178 27.714047507269672 33.6989608945166 16.601286040020547 17 22.23807742940528 27.452215558909316 28.222150903260545 22.08755610842486 18 21.72882467824686 28.682732883670226 31.298842068874666 18.289600369208245 19 23.990799853943482 29.150476230893073 28.221620431644755 18.63710348351869 20 25.47223025297307 29.542406343025934 28.55462398845694 16.430739415544057 21 25.107752046957348 27.414552074188226 30.812709038971096 16.66498683988333 22 23.60359978038475 23.91962824549165 31.508599386951637 20.96817258717196 23 20.326390344002 27.565515454848466 31.861584041291913 20.24651015985762 24 19.99214902008631 27.012189353611493 34.75535091139444 18.240310714907757 25 20.09280600918246 29.718920773180063 31.104733663463502 19.083539554173974 26 19.70339563722461 32.93119164259652 27.77942813391579 19.585984586263084 27 18.720829586877546 31.450645362926576 31.508864622759532 18.319660427436347 28 17.17357650152201 29.893887994454804 34.08059101610954 18.851944487913645 29 18.291191784055616 27.599288814387098 33.88926758668127 20.22025181487602 30 20.047450686032416 28.131484462928434 32.880001131672785 18.94106371936637 31 22.818722818855434 27.669399479607343 29.998346696797455 19.513531004739765 32 23.953755252774144 27.805244419217573 29.61972258102733 18.62127774698095 33 22.59791400878284 27.94515630788219 29.466151048256116 19.99077863507885 34 20.032067009174508 27.76285089592235 31.173385531740326 21.031696563162814 35 19.88954696839892 27.57692059458795 31.15366967002013 21.379862766992996 36 22.418879838453712 27.44806019791896 30.773940405050443 19.359119558576886 37 20.009256729695537 29.19441696306768 31.304146785032565 19.492179522204214 38 19.444304458879166 29.781162776099425 29.27637482770724 21.49815793731417 39 19.87575470638838 28.709786936075517 30.822478557895227 20.591979799640868 40 22.367645121561992 26.99211984414744 30.08096765095675 20.55926738333382 41 19.230922251427632 26.217100813478222 31.11631562707492 23.435661308019228 42 20.368872279233187 27.022224108343522 29.659950011891407 22.948953600531887 43 20.39632418535032 27.520115925730437 29.909625319056577 22.17393456986267 44 20.087678116896495 28.85946834366427 29.583473687281675 21.469379852157562 45 19.80056035485015 30.23449497775998 28.279618661637794 21.68532600575208 46 21.478309457690024 29.396261412875784 28.807172683540973 20.31825644589322 47 20.288505829440997 27.609986658638864 30.635045253649423 21.466462258270717 48 20.181217945147466 27.00224301081543 31.797883241429126 21.018655802607974 49 20.627654015802747 26.570836969274197 31.492773650413902 21.30873536450915 50 19.497307414490187 28.242485648532494 31.135766252987217 21.1244406839901 51 18.455991632694378 29.237429369914658 30.009088747017206 22.297490250373762 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1024.0 1 1928.5 2 2833.0 3 11646.0 4 20459.0 5 14543.5 6 8628.0 7 8056.0 8 7484.0 9 7753.0 10 8022.0 11 8028.0 12 8034.0 13 7868.5 14 7703.0 15 7584.5 16 7466.0 17 7461.0 18 7456.0 19 8049.0 20 8642.0 21 9756.0 22 10870.0 23 12482.5 24 14095.0 25 17429.5 26 27349.0 27 33934.0 28 39658.0 29 45382.0 30 53716.5 31 62051.0 32 70287.5 33 78524.0 34 86078.0 35 93632.0 36 101132.0 37 108632.0 38 116678.0 39 124724.0 40 138814.0 41 152904.0 42 170722.0 43 188540.0 44 192342.5 45 196145.0 46 194181.5 47 192218.0 48 187143.5 49 182069.0 50 172027.0 51 161985.0 52 144605.0 53 127225.0 54 115708.0 55 104191.0 56 94758.0 57 85325.0 58 75336.5 59 65348.0 60 57502.0 61 49656.0 62 40105.5 63 30555.0 64 24727.0 65 18899.0 66 15407.5 67 11916.0 68 9075.5 69 6235.0 70 5070.5 71 3906.0 72 3038.5 73 2171.0 74 1591.5 75 845.5 76 679.0 77 541.5 78 404.0 79 336.0 80 268.0 81 163.0 82 58.0 83 41.0 84 24.0 85 23.5 86 23.0 87 15.0 88 7.0 89 5.5 90 4.0 91 3.0 92 2.0 93 4.5 94 7.0 95 5.0 96 3.0 97 1.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2262138.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.124576807712682 #Duplication Level Percentage of deduplicated Percentage of total 1 79.31657468327663 17.54845648704833 2 7.832542065476177 3.465833570545364 3 2.519996145047577 1.6726154479873494 4 1.2096397009562487 1.0705106589386049 5 0.7213141674705769 0.7979385350347054 6 0.5097631416185934 0.6766976268288893 7 0.38984798589156905 0.6037655195033076 8 0.3375165490663552 0.5973928650954162 9 0.27499918122948164 0.5475816456452789 >10 4.34013984864567 24.537050931572757 >50 1.957138153769908 31.05023167194545 >100 0.587511375251312 16.384218623353462 >500 0.0022124683533034837 0.32467150929290495 >1k 6.034004599918592E-4 0.16549524987120526 >5k 0.0 0.0 >10k+ 2.0113348666395307E-4 0.5575396573370074 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12529 0.5538565728527614 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.048140299132944146 0.0 2 0.0 0.0 0.0 0.16661229332604818 0.0 3 0.0 0.0 0.0 0.2722645568042268 0.0 4 0.0 0.0 0.0 0.4132373887004241 0.0 5 0.0 0.0 0.0 0.7691396369275437 0.0 6 0.0 0.0 0.0 1.111249623144123 0.0 7 0.0 0.0 0.0 1.345718077323311 0.0 8 0.0 0.0 0.0 1.800376458023339 0.0 9 0.0 0.0 0.0 1.9619050650313996 0.0 10 4.420596798250151E-5 0.0 0.0 2.2291743474536037 0.0 11 4.420596798250151E-5 0.0 0.0 2.6644263082093134 0.0 12 4.420596798250151E-5 0.0 0.0 2.998446602285095 0.0 13 4.420596798250151E-5 0.0 0.0 3.1293404734812817 0.0 14 4.420596798250151E-5 0.0 0.0 3.187250291538359 0.0 15 4.420596798250151E-5 0.0 0.0 3.2718605142568666 0.0 16 4.420596798250151E-5 0.0 0.0 3.4598242901184633 0.0 17 4.420596798250151E-5 0.0 0.0 3.710383716643282 0.0 18 4.420596798250151E-5 0.0 0.0 3.9730113724273233 0.0 19 4.420596798250151E-5 0.0 0.0 4.160046822961287 0.0 20 4.420596798250151E-5 0.0 0.0 4.355348789507978 0.0 21 4.420596798250151E-5 0.0 0.0 4.599542556643317 0.0 22 4.420596798250151E-5 0.0 0.0 4.895855160030025 0.0 23 4.420596798250151E-5 0.0 0.0 5.178861767053999 0.0 24 4.420596798250151E-5 0.0 0.0 5.394719508712554 0.0 25 4.420596798250151E-5 0.0 0.0 5.579721484719323 0.0 26 4.420596798250151E-5 0.0 0.0 5.762203720551089 0.0 27 4.420596798250151E-5 0.0 0.0 5.954057621595146 0.0 28 4.420596798250151E-5 0.0 0.0 6.152011946220788 0.0 29 4.420596798250151E-5 0.0 0.0 6.38002632907453 0.0 30 4.420596798250151E-5 0.0 0.0 6.654722214117795 0.0 31 8.841193596500302E-5 0.0 0.0 6.898606539477256 0.0 32 8.841193596500302E-5 0.0 0.0 7.105888323347205 0.0 33 8.841193596500302E-5 0.0 0.0 7.32280700823734 0.0 34 8.841193596500302E-5 0.0 0.0 7.560060438399426 0.0 35 8.841193596500302E-5 0.0 0.0 7.824058479190925 0.0 36 8.841193596500302E-5 0.0 0.0 8.070418338757406 0.0 37 8.841193596500302E-5 0.0 0.0 8.324691066592754 0.0 38 8.841193596500302E-5 0.0 0.0 8.597397683076807 0.0 39 8.841193596500302E-5 0.0 0.0 8.96134541747674 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGCGTG 20 7.034738E-4 45.0 35 TCGGTAC 20 7.034738E-4 45.0 36 CGACGGT 335 0.0 42.985077 28 CGTAAGG 285 0.0 42.63158 2 CGTTTTT 5900 0.0 42.177963 1 CGGTCTA 360 0.0 41.875004 31 TAGCACG 65 0.0 41.538464 1 AAACGCG 45 1.9297659E-8 40.000004 1 CGGGCGA 345 0.0 39.782608 6 TTTCGCG 85 0.0 39.705883 1 TATCGCG 85 0.0 39.705883 1 CCAATCG 40 3.460209E-7 39.375 24 GGGCGAT 2240 0.0 38.872765 7 TACGGGA 1100 0.0 38.863636 4 TAGGGAC 3225 0.0 38.581398 5 AGGGATC 3730 0.0 38.24397 6 GTTACGG 265 0.0 38.207546 2 AGGGCGA 1145 0.0 38.122272 6 TGGGCGA 615 0.0 38.04878 6 GACCGAT 820 0.0 37.865856 9 >>END_MODULE