##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548123_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1367108 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.512626654221904 31.0 31.0 33.0 30.0 34.0 2 31.916573526012577 31.0 31.0 34.0 30.0 34.0 3 32.01480351223166 33.0 31.0 34.0 30.0 34.0 4 35.73128677470982 37.0 35.0 37.0 35.0 37.0 5 35.61317320943188 37.0 35.0 37.0 33.0 37.0 6 35.67460434727907 37.0 35.0 37.0 33.0 37.0 7 36.059078726772135 37.0 35.0 37.0 35.0 37.0 8 36.093185030004946 37.0 35.0 37.0 35.0 37.0 9 37.96271691775632 39.0 38.0 39.0 35.0 39.0 10 37.3038728469148 39.0 37.0 39.0 34.0 39.0 11 36.93436144035438 39.0 37.0 39.0 33.0 39.0 12 36.16670592228266 38.0 35.0 39.0 32.0 39.0 13 35.7917728518888 38.0 35.0 39.0 31.0 39.0 14 36.74827665407561 39.0 35.0 41.0 31.0 41.0 15 37.021594489974454 39.0 35.0 41.0 32.0 41.0 16 37.19404465484804 39.0 35.0 41.0 32.0 41.0 17 37.14023764033273 39.0 35.0 41.0 32.0 41.0 18 37.08256699543855 38.0 35.0 41.0 32.0 41.0 19 37.05003847538015 38.0 35.0 41.0 32.0 41.0 20 36.92614701984042 38.0 35.0 41.0 32.0 41.0 21 36.76840015565705 38.0 35.0 41.0 32.0 41.0 22 36.69245224225153 38.0 35.0 41.0 31.0 41.0 23 36.645534954078244 38.0 35.0 40.0 31.0 41.0 24 36.662745006246766 38.0 35.0 41.0 31.0 41.0 25 36.63394698882605 38.0 35.0 40.0 31.0 41.0 26 36.51819826963195 38.0 35.0 40.0 31.0 41.0 27 36.47885390181317 38.0 35.0 40.0 31.0 41.0 28 36.482227446551406 38.0 35.0 40.0 31.0 41.0 29 36.442610240010296 38.0 35.0 40.0 31.0 41.0 30 36.367888272177474 38.0 35.0 40.0 31.0 41.0 31 36.264892020235415 38.0 35.0 40.0 30.0 41.0 32 36.14893702618959 38.0 35.0 40.0 30.0 41.0 33 36.05314064433827 38.0 35.0 40.0 30.0 41.0 34 35.948971844214206 38.0 35.0 40.0 30.0 41.0 35 35.85130509074631 38.0 35.0 40.0 30.0 41.0 36 35.68651562275987 38.0 35.0 40.0 29.0 41.0 37 35.61413436246441 38.0 34.0 40.0 29.0 41.0 38 35.519548565292574 38.0 34.0 40.0 29.0 41.0 39 35.47420028264043 38.0 34.0 40.0 29.0 41.0 40 35.33556090667307 37.0 34.0 40.0 27.0 41.0 41 35.30767942254745 37.0 34.0 40.0 28.0 41.0 42 35.27714562419355 37.0 34.0 40.0 27.0 41.0 43 35.173815821427425 37.0 34.0 40.0 27.0 41.0 44 35.008826661829204 37.0 34.0 40.0 27.0 41.0 45 34.97342346032647 37.0 34.0 40.0 27.0 41.0 46 34.890683837707044 37.0 34.0 40.0 27.0 41.0 47 34.81995131328322 36.0 34.0 40.0 26.0 41.0 48 34.71890370036603 36.0 34.0 40.0 26.0 41.0 49 34.64594018907065 36.0 34.0 40.0 26.0 41.0 50 34.470926949443644 36.0 34.0 40.0 25.0 41.0 51 34.091039625252726 35.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 0.0 11 4.0 12 1.0 13 4.0 14 20.0 15 27.0 16 90.0 17 225.0 18 457.0 19 1008.0 20 1702.0 21 2887.0 22 4470.0 23 6780.0 24 9567.0 25 13565.0 26 17912.0 27 21033.0 28 23758.0 29 27307.0 30 32878.0 31 40089.0 32 50429.0 33 66626.0 34 118452.0 35 193384.0 36 87077.0 37 114156.0 38 182756.0 39 350386.0 40 57.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.55894925638648 24.423308180480255 30.602264049365523 12.41547851376775 2 28.46885542327307 26.073068111663456 32.4544951825313 13.003581282532178 3 28.544489535574364 25.56652437115429 31.83281789002771 14.056168203243635 4 27.106929372075943 26.103789898091446 31.75513565863121 15.034145071201396 5 22.880928207573945 31.70407897547231 30.44580237991439 14.969190437039357 6 21.739979577326736 40.936634121078946 27.083449149591694 10.239937152002621 7 90.56373015153156 3.3488210148722706 4.736494848980476 1.3509539846156997 8 92.18971727178833 2.178540393297384 4.267109840627076 1.3646324942872106 9 88.73775883105066 3.9126389429364763 5.314869052042706 2.034733173970162 10 48.23517966393291 26.870956793464746 12.995461953261922 11.898401589340418 11 40.63651152652168 23.69878605055343 21.206663994358895 14.458038428565995 12 39.313572885243886 21.978439157696393 22.595288740904156 16.112699216155562 13 24.080760261808138 34.59141486992981 23.76132683006756 17.566498038194496 14 16.904882423334513 37.52593065068744 26.946883494208212 18.622303431769836 15 16.261480438999698 27.27165666501842 40.97042808614974 15.496434809832142 16 20.595007855999672 23.2419823452134 38.78208598003962 17.380923818747313 17 20.646649716042916 24.06408272060437 25.739151552035395 29.550116011317325 18 22.825994727556274 27.246128323438967 30.71586151203855 19.212015436966208 19 27.68281657337972 28.143935958241777 24.393683600710407 19.7795638676681 20 30.421298097882538 26.001164501999842 25.085070089561324 18.4924673105563 21 24.339627886019247 28.831957680007726 27.629419182683446 19.19899525128958 22 24.322877197704937 23.15032901570322 27.613985142358903 24.912808644232936 23 20.768951684870544 28.97693525310363 27.604988047762134 22.649125014263685 24 21.420692439807244 25.40574702218113 34.65212697168036 18.521433566331265 25 19.614543986283454 27.2371312288422 32.522887730888854 20.625437053985493 26 17.72727538716766 35.50502228060987 25.61706902453939 21.15063330768308 27 17.544041875257843 34.90989738923333 29.759024159027668 17.787036576481157 28 15.872337810911793 29.901148994812406 35.78429794866243 18.442215245613365 29 17.82324439619986 27.139479836267512 35.3321025112866 19.70517325624603 30 19.577458401238236 30.846941134131317 30.243916354816154 19.331684109814294 31 26.71164238670244 27.86188069998859 25.846458363201734 19.580018550107233 32 27.694593258177115 27.92164188930209 26.509463773162032 17.874301079358762 33 27.018348221208566 28.188921431225623 25.12581303013368 19.666917317432127 34 20.030824192382752 28.7617364538866 28.037141176849232 23.170298176881417 35 19.960749260482714 27.884410010035783 29.62655474183459 22.528285987646914 36 26.55145021461362 26.62869356334686 27.58765218256348 19.232204039476034 37 19.754401261641362 32.42135954145539 28.586914859689212 19.23732433721403 38 20.657402341292713 32.38851648882166 24.909078141595252 22.045003028290378 39 20.10821383533708 30.577832914444215 28.21957007054307 21.094383179675635 40 24.01997501294704 27.176492274202186 26.761162980539943 22.042369732310835 41 18.151089745652868 25.533388730078382 28.872408032137916 27.443113492130834 42 21.472334299850488 26.6492479014094 26.146580957759006 25.73183684098111 43 21.87691096826293 26.72502830793178 26.77630443242231 24.62175629138298 44 19.945168925937086 29.788795033018605 28.82083931920521 21.445196721839093 45 19.33417111157275 34.96212442616092 24.37013023111561 21.33357423115072 46 22.559300362517078 31.798950777846375 25.91872770841806 19.723021151218482 47 21.17974585767913 29.267109840627075 25.77236034022184 23.780783961471954 48 21.472846329624286 27.739871319603132 29.683975223610716 21.103307127161862 49 20.9573786416289 25.97717224974179 30.014892751706522 23.050556356922787 50 19.435991889448385 31.333515713462283 28.19791852582239 21.032573871266937 51 18.8831460279656 32.88745292983437 25.84594633342794 22.383454708772092 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 578.0 1 1216.0 2 1854.0 3 4509.0 4 7164.0 5 5423.5 6 3683.0 7 3675.0 8 3667.0 9 3904.0 10 4141.0 11 4132.5 12 4124.0 13 4087.5 14 4051.0 15 3937.5 16 3824.0 17 3489.0 18 3154.0 19 3087.5 20 3021.0 21 3448.0 22 3875.0 23 4570.5 24 5266.0 25 6999.5 26 10115.0 27 11497.0 28 13083.0 29 14669.0 30 17691.0 31 20713.0 32 26106.5 33 31500.0 34 33975.5 35 36451.0 36 42339.0 37 48227.0 38 55548.5 39 62870.0 40 81114.0 41 99358.0 42 118224.0 43 137090.0 44 136237.5 45 135385.0 46 134632.0 47 133879.0 48 129942.5 49 126006.0 50 116079.0 51 106152.0 52 95934.0 53 85716.0 54 76413.0 55 67110.0 56 61224.5 57 55339.0 58 51360.0 59 47381.0 60 41870.0 61 36359.0 62 29286.0 63 22213.0 64 17626.0 65 13039.0 66 10761.0 67 8483.0 68 6596.0 69 4709.0 70 3675.0 71 2641.0 72 2133.0 73 1625.0 74 1150.5 75 534.0 76 392.0 77 266.5 78 141.0 79 133.5 80 126.0 81 109.0 82 92.0 83 75.0 84 58.0 85 49.0 86 40.0 87 27.5 88 15.0 89 15.5 90 16.0 91 8.5 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.5 98 1.0 99 1.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1367108.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.642647915169135 #Duplication Level Percentage of deduplicated Percentage of total 1 81.39527991302145 16.802141052011404 2 7.893193118321013 3.2587281293587322 3 2.3851248495368087 1.4770587750812731 4 1.0461875250956436 0.8638432293516617 5 0.6083367948234334 0.627884113469131 6 0.42838776701308867 0.5305834707370018 7 0.2992364333228186 0.43239226355317495 8 0.2500064914900304 0.4128636784268341 9 0.1814130514890802 0.3370361174194979 >10 2.711295385381773 14.264493548776947 >50 1.547807500125656 23.495894952356558 >100 1.2516001825543024 36.786874528777034 >500 0.0010654939125036623 0.1412054327398738 >1k 0.0010654939125036623 0.5690007079408933 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4132 0.30224386076301213 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2360 0.17262718088110082 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.314711054283934E-5 0.0 0.0 0.045790091199817425 0.0 2 7.314711054283934E-5 0.0 0.0 0.16853094269070182 0.0 3 7.314711054283934E-5 0.0 0.0 0.2443113492130834 0.0 4 7.314711054283934E-5 0.0 0.0 0.3659549940458252 0.0 5 7.314711054283934E-5 0.0 0.0 0.6340391541853314 0.0 6 7.314711054283934E-5 0.0 0.0 0.8633553457371327 0.0 7 7.314711054283934E-5 0.0 0.0 1.000213589562785 0.0 8 7.314711054283934E-5 0.0 0.0 1.3152581946707942 0.0 9 1.4629422108567867E-4 0.0 0.0 1.3987921949107167 0.0 10 1.4629422108567867E-4 0.0 0.0 1.6197696158606343 0.0 11 1.4629422108567867E-4 0.0 0.0 1.969485951365949 0.0 12 1.4629422108567867E-4 0.0 0.0 2.2264517507029438 0.0 13 1.4629422108567867E-4 0.0 0.0 2.3328076494322323 0.0 14 1.4629422108567867E-4 0.0 0.0 2.3723070891253655 0.0 15 1.4629422108567867E-4 0.0 0.0 2.4472828774317756 0.0 16 1.4629422108567867E-4 0.0 0.0 2.6212998534131904 0.0 17 1.4629422108567867E-4 0.0 0.0 2.831817237555482 0.0 18 1.4629422108567867E-4 0.0 0.0 3.0898070964400763 0.0 19 1.4629422108567867E-4 0.0 0.0 3.2390272019474686 0.0 20 1.4629422108567867E-4 0.0 0.0 3.3912463389871172 0.0 21 1.4629422108567867E-4 0.0 0.0 3.6123700541581205 0.0 22 1.4629422108567867E-4 0.0 0.0 3.8417593928204647 0.0 23 1.4629422108567867E-4 0.0 0.0 4.086655918917891 0.0 24 1.4629422108567867E-4 0.0 0.0 4.25072488786548 0.0 25 1.4629422108567867E-4 0.0 0.0 4.404114378673814 0.0 26 1.4629422108567867E-4 0.0 0.0 4.554139102397177 0.0 27 1.4629422108567867E-4 0.0 0.0 4.713526656270024 0.0 28 1.4629422108567867E-4 0.0 0.0 4.875181770569699 0.0 29 1.4629422108567867E-4 0.0 0.0 5.057464370042455 0.0 30 1.4629422108567867E-4 0.0 0.0 5.285537060715027 0.0 31 1.4629422108567867E-4 0.0 0.0 5.49839515239469 0.0 32 1.4629422108567867E-4 0.0 0.0 5.68492028427893 0.0 33 1.4629422108567867E-4 0.0 0.0 5.8716648574948 0.0 34 1.4629422108567867E-4 0.0 0.0 6.067187083975809 0.0 35 1.4629422108567867E-4 0.0 0.0 6.31376599361572 0.0 36 1.4629422108567867E-4 0.0 0.0 6.51031227964433 0.0 37 1.4629422108567867E-4 0.0 0.0 6.742554355617845 0.0 38 1.4629422108567867E-4 0.0 0.0 6.972163135611817 0.0 39 1.4629422108567867E-4 0.0 0.0 7.285891092730055 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTAAT 25 3.8911938E-5 45.000004 41 ACCGTGC 25 3.8911938E-5 45.000004 25 GTACGTA 25 3.8911938E-5 45.000004 20 TATCCGT 25 3.8911938E-5 45.000004 18 GTATTCG 40 6.8175723E-9 45.0 9 TCGATAT 35 1.2121563E-7 45.0 36 CCGTACT 20 7.0337567E-4 45.0 18 TGTTCGG 95 0.0 45.0 2 CGGTATG 20 7.0337567E-4 45.0 41 ACACGAT 30 2.1658052E-6 44.999996 26 ATCACGC 30 2.1658052E-6 44.999996 15 TCGGTTA 30 2.1658052E-6 44.999996 24 CGACGGT 625 0.0 43.56 28 TTGCGAG 130 0.0 43.269234 1 ACGGGTA 125 0.0 43.199997 5 CGGGTAT 115 0.0 43.04348 6 CGGTCTA 620 0.0 42.822582 31 CTCACGA 635 0.0 42.519684 24 TCACGAC 640 0.0 42.1875 25 ACGGTCT 640 0.0 42.1875 30 >>END_MODULE