##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548119_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1362952 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.539319799963607 31.0 31.0 33.0 30.0 34.0 2 31.944564445409668 31.0 31.0 34.0 30.0 34.0 3 32.04922623834148 33.0 31.0 34.0 30.0 34.0 4 35.75064492366569 37.0 35.0 37.0 35.0 37.0 5 35.64720401011921 37.0 35.0 37.0 33.0 37.0 6 35.713875470302696 37.0 35.0 37.0 33.0 37.0 7 36.05780174210097 37.0 35.0 37.0 35.0 37.0 8 36.07999254559221 37.0 35.0 37.0 35.0 37.0 9 37.89870296239339 39.0 38.0 39.0 35.0 39.0 10 37.37099692432309 39.0 37.0 39.0 35.0 39.0 11 37.01641363745752 39.0 37.0 39.0 33.0 39.0 12 36.27348945524127 38.0 35.0 39.0 32.0 39.0 13 35.975138522853335 38.0 35.0 39.0 32.0 39.0 14 37.033657091372255 39.0 35.0 41.0 32.0 41.0 15 37.26052568248919 39.0 35.0 41.0 32.0 41.0 16 37.400399280385514 39.0 35.0 41.0 33.0 41.0 17 37.35819309850971 39.0 35.0 41.0 33.0 41.0 18 37.30859927568983 39.0 35.0 41.0 32.0 41.0 19 37.25185479752772 39.0 35.0 41.0 32.0 41.0 20 37.12887981381589 39.0 35.0 41.0 32.0 41.0 21 36.97960823271839 39.0 35.0 41.0 32.0 41.0 22 36.87024634763367 38.0 35.0 41.0 32.0 41.0 23 36.81020314728619 38.0 35.0 41.0 32.0 41.0 24 36.834217199138344 38.0 35.0 41.0 32.0 41.0 25 36.815260552095744 38.0 35.0 41.0 32.0 41.0 26 36.67398118202255 38.0 35.0 41.0 31.0 41.0 27 36.61654335589221 38.0 35.0 41.0 31.0 41.0 28 36.59102154734723 38.0 35.0 41.0 31.0 41.0 29 36.57320067030974 38.0 35.0 40.0 31.0 41.0 30 36.51659339433817 38.0 35.0 40.0 31.0 41.0 31 36.433391638150134 38.0 35.0 41.0 31.0 41.0 32 36.29117092898356 38.0 35.0 41.0 30.0 41.0 33 36.22723911040154 38.0 35.0 41.0 30.0 41.0 34 36.149418321408234 38.0 35.0 41.0 30.0 41.0 35 36.05231071967318 38.0 35.0 41.0 30.0 41.0 36 35.90424167542217 38.0 35.0 40.0 30.0 41.0 37 35.803503718399476 38.0 35.0 40.0 29.0 41.0 38 35.734315661886846 38.0 35.0 40.0 29.0 41.0 39 35.71786974156097 38.0 35.0 40.0 29.0 41.0 40 35.57183451801678 38.0 35.0 40.0 29.0 41.0 41 35.556395969924104 38.0 34.0 40.0 29.0 41.0 42 35.512916082151094 38.0 34.0 40.0 28.0 41.0 43 35.433730608267936 38.0 34.0 40.0 28.0 41.0 44 35.25509115508103 37.0 34.0 40.0 27.0 41.0 45 35.21685503231222 37.0 34.0 40.0 27.0 41.0 46 35.142649190873925 37.0 34.0 40.0 27.0 41.0 47 35.07783106081506 37.0 34.0 40.0 27.0 41.0 48 34.99160498682272 37.0 34.0 40.0 27.0 41.0 49 34.89765523657473 36.0 34.0 40.0 27.0 41.0 50 34.72163363053138 36.0 34.0 40.0 26.0 41.0 51 34.35942498341834 36.0 33.0 40.0 25.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 2.0 11 2.0 12 7.0 13 6.0 14 19.0 15 38.0 16 87.0 17 197.0 18 450.0 19 913.0 20 1635.0 21 2656.0 22 4029.0 23 6020.0 24 8588.0 25 12510.0 26 16215.0 27 19454.0 28 22147.0 29 25826.0 30 30975.0 31 38481.0 32 48088.0 33 63715.0 34 114169.0 35 183563.0 36 88677.0 37 117039.0 38 188856.0 39 368503.0 40 84.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.23726734323733 24.33064407257189 29.567585652319377 12.864502931871408 2 29.228175313584043 26.732269368253615 30.654564504105792 13.384990814056547 3 30.00362448567521 25.76018817977449 30.162837722825163 14.073349611725138 4 27.502509259313605 27.271173159436284 30.142220709166573 15.084096872083535 5 23.836862926940935 33.51673426503648 28.26042296427167 14.385979843750917 6 22.660739336381617 41.82480380820455 25.386220497860528 10.12823635755331 7 89.7727873028544 4.0885519079175205 4.642716691416866 1.4959440978112215 8 90.53862498459226 3.4631447035552245 4.363983471171399 1.6342468406811097 9 85.30667257540985 6.764581584677963 5.550012032705481 2.37873380720671 10 46.093039226619865 35.39713797697938 10.24328076117134 8.266542035229413 11 40.392545005253304 21.40332161367385 23.40361215948911 14.80052122158374 12 39.10335800527091 21.082033703314572 24.052130962792525 15.76247732862199 13 24.04266621274997 35.362947484577596 23.572290146681617 17.02209615599082 14 17.33876174656187 37.582247944168245 26.000255328140682 19.078734981129198 15 15.979652988513168 28.871302877870974 40.039781298240875 15.109262835374981 16 19.64104385187446 24.457574441359636 38.91010101602991 16.99128069073599 17 18.995166374164313 25.745294038234658 26.433285985126403 28.826253602474626 18 22.290586902546824 28.429761282862493 30.16349805422348 19.1161537603672 19 27.868332853981652 28.476498071832317 24.344877882713405 19.31029119147263 20 30.79778304738538 26.579512704776104 25.440734523299426 17.18196972453909 21 24.53835498242051 28.812386643109956 27.8230634681192 18.82619490635033 22 24.502917197377457 24.928464098515573 25.749696247556773 24.818922456550194 23 21.707147427055393 29.247178183824524 26.59403999553909 22.451634393580992 24 20.73051728894341 25.770019780593888 35.720553621844346 17.778909308618353 25 19.36194378085215 29.12420980342668 31.070573285045988 20.443273130675184 26 18.895089482241488 36.27794669217991 24.815033838315657 20.011929987262942 27 19.127892985226186 35.73625483509324 27.516302848522912 17.619549331157664 28 16.20937494497238 31.03917085854821 35.144304421579044 17.607149774900364 29 17.564008123543605 26.701674013464892 34.69454536916927 21.039772493822234 30 19.708984615745823 30.85611232090345 30.02989100129718 19.405012062053544 31 28.065258350991083 28.35910582324249 24.33269843692221 19.242937388844215 32 27.827172196819845 29.219004044162965 25.64103504745582 17.312788711561375 33 25.543452740815525 30.119402590846928 24.57555365119241 19.76159101714514 34 20.111346547787452 29.22083829804718 27.928936602316153 22.738878551849222 35 21.15063479858425 26.872479735163086 29.7678128063204 22.209072659932264 36 27.56443367044474 27.946912290381466 25.935249370484065 18.553404668689726 37 20.989954158326928 33.185468013547066 28.178468500724897 17.64610932740111 38 20.770797504240797 32.02145049862358 25.399500495982252 21.80825150115338 39 20.524714003134374 31.31783070863831 27.958578145085077 20.198877143142237 40 23.884920378707395 27.848963132964332 26.42800333393986 21.838113154388417 41 18.086403629768327 26.0133152157963 29.341091982696383 26.55918917173899 42 20.9221601347663 27.441098439270057 25.42224524414653 26.214496181817115 43 22.30386690066855 27.284820008334847 26.20503143177456 24.206281659222043 44 20.226611061871587 31.084220133944555 27.767742370971245 20.921426433212613 45 19.499659562479092 36.025773468177896 23.69841344376031 20.776153525582703 46 21.287029917414554 33.15663354248719 25.29648879784468 20.259847742253577 47 21.1809366727515 28.79008211587789 27.467511695202766 22.561469516167847 48 22.215089012672493 25.184085719819922 31.54601189183478 21.054813375672804 49 20.680405472826628 26.712826277080925 30.587577552254224 22.019190697838223 50 19.304494949198507 31.81278577675516 28.32080660214006 20.561912671906274 51 18.699117797251848 31.569490341552747 26.531822103786485 23.19956975740892 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 483.0 1 1338.0 2 2193.0 3 5040.5 4 7888.0 5 5988.5 6 4089.0 7 3936.5 8 3784.0 9 3872.0 10 3960.0 11 3978.5 12 3997.0 13 4024.5 14 4052.0 15 4000.5 16 3949.0 17 3759.5 18 3570.0 19 3325.5 20 3081.0 21 4081.0 22 5081.0 23 5056.0 24 5031.0 25 7246.0 26 12122.5 27 14784.0 28 20277.0 29 25770.0 30 28885.5 31 32001.0 32 37133.5 33 42266.0 34 44804.0 35 47342.0 36 48466.0 37 49590.0 38 56276.5 39 62963.0 40 80438.0 41 97913.0 42 112180.0 43 126447.0 44 131044.0 45 135641.0 46 125652.5 47 115664.0 48 109679.5 49 103695.0 50 96801.0 51 89907.0 52 81759.0 53 73611.0 54 66919.5 55 60228.0 56 56512.0 57 52796.0 58 50643.0 59 48490.0 60 45926.0 61 43362.0 62 36595.5 63 29829.0 64 24390.5 65 18952.0 66 15210.0 67 11468.0 68 9485.5 69 7503.0 70 6175.0 71 4847.0 72 4030.0 73 3213.0 74 2643.0 75 1602.0 76 1131.0 77 791.5 78 452.0 79 333.0 80 214.0 81 159.0 82 104.0 83 67.5 84 31.0 85 27.5 86 24.0 87 15.0 88 6.0 89 7.0 90 8.0 91 6.0 92 4.0 93 3.5 94 3.0 95 1.5 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1362952.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.21402863251074 #Duplication Level Percentage of deduplicated Percentage of total 1 81.53248116668671 15.665674276163614 2 7.546500435518334 2.899973508866081 3 2.192564018207303 1.2638396347334375 4 0.9869527571482533 0.7585335413912783 5 0.5229325637097918 0.5023820625996094 6 0.36659223579316397 0.4226228228991589 7 0.25359436583799316 0.3410798584378223 8 0.2210992930641626 0.3398566518050163 9 0.18013417982758145 0.311499296001089 >10 2.983154805618176 15.212400620283997 >50 1.958725155412607 27.523657307109772 >100 1.2472273363282809 32.95170605198148 >500 0.005361124565120029 0.679710930488189 >1k 0.0026805622825600145 1.1270634372394541 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4422 0.3244428270401305 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 3062 0.2246594157387788 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 1827 0.13404727385850712 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 1817 0.13331357230482072 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 1658 0.12164771760120678 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.03154916680851563 0.0 2 0.0 0.0 0.0 0.10968838227611831 0.0 3 0.0 0.0 0.0 0.1628083747630144 0.0 4 0.0 0.0 0.0 0.24571665032957873 0.0 5 0.0 0.0 0.0 0.4220251336804231 0.0 6 0.0 0.0 0.0 0.5789638960139462 0.0 7 0.0 0.0 0.0 0.6800679701119335 0.0 8 0.0 0.0 0.0 0.901939319946704 0.0 9 0.0 0.0 0.0 0.9651110237191038 0.0 10 0.0 0.0 0.0 1.110383931349013 0.0 11 0.0 0.0 0.0 1.3381248936132748 0.0 12 0.0 0.0 0.0 1.5082702839131532 0.0 13 0.0 0.0 0.0 1.5754039760754597 0.0 14 0.0 0.0 0.0 1.6048987785336535 0.0 15 0.0 0.0 0.0 1.6609535772352952 0.0 16 0.0 0.0 0.0 1.7749707986781633 0.0 17 0.0 0.0 0.0 1.9268470202912502 0.0 18 0.0 0.0 0.0 2.1056500889246283 0.0 19 0.0 0.0 0.0 2.2059470913135604 0.0 20 0.0 0.0 0.0 2.3159289542111536 0.0 21 0.0 0.0 0.0 2.45701976298505 0.0 22 0.0 0.0 0.0 2.621735761787649 0.0 23 0.0 0.0 0.0 2.785204467948981 0.0 24 0.0 0.0 0.0 2.9049445615106033 0.0 25 0.0 0.0 0.0 3.0048747131226925 0.0 26 0.0 0.0 0.0 3.1064190081528915 0.0 27 0.0 0.0 0.0 3.2037078341717096 0.0 28 0.0 0.0 0.0 3.31545058079815 0.0 29 0.0 0.0 0.0 3.4393727732157844 0.0 30 0.0 0.0 0.0 3.597045237102994 0.0 31 0.0 0.0 0.0 3.7510491932217715 0.0 32 0.0 0.0 0.0 3.888031273295024 0.0 33 0.0 0.0 0.0 4.015181752548879 0.0 34 0.0 0.0 0.0 4.156125821012038 0.0 35 0.0 0.0 0.0 4.32773861441929 0.0 36 0.0 0.0 0.0 4.483723564733021 0.0 37 0.0 0.0 0.0 4.641689509241705 0.0 38 0.0 0.0 0.0 4.803470701829558 0.0 39 0.0 0.0 0.0 4.967966590166052 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTATAC 20 7.0337474E-4 45.000004 17 TAGACCC 20 7.0337474E-4 45.000004 22 CGGCACA 25 3.891188E-5 45.000004 19 CCTAACG 25 3.891188E-5 45.000004 33 TTATCCG 30 2.1657997E-6 45.000004 1 CCGTCAG 25 3.891188E-5 45.000004 25 ATATACG 40 6.8175723E-9 45.000004 1 TCCGTCG 30 2.1657997E-6 45.000004 4 TATAGCG 90 0.0 45.000004 1 CCGCGAC 20 7.0337474E-4 45.000004 24 ATCGGGT 30 2.1657997E-6 45.000004 22 CGCAATA 25 3.891188E-5 45.000004 28 TGAATCG 20 7.0337474E-4 45.000004 41 GCGCTAA 20 7.0337474E-4 45.000004 43 TATCGTT 20 7.0337474E-4 45.000004 15 CAATACG 20 7.0337474E-4 45.000004 1 AGTACGG 125 0.0 45.000004 2 GCGTAAT 25 3.891188E-5 45.000004 26 GATTACG 105 0.0 45.0 1 CGGTCTA 215 0.0 43.95349 31 >>END_MODULE