SRR1548115_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1548115_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1188095
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5047	0.42479768032017645	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	2396	0.2016673750836423	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGCGTAA	25	3.8908845E-5	45.000004	23
CGCGGAC	25	3.8908845E-5	45.000004	24
CTATCCG	25	3.8908845E-5	45.000004	45
CTATACG	30	2.1655633E-6	45.000004	1
CGACCTT	25	3.8908845E-5	45.000004	29
TCCTCGA	30	2.1655633E-6	45.000004	23
TAACGTG	25	3.8908845E-5	45.000004	20
CGTTACG	25	3.8908845E-5	45.000004	44
TACGAGA	25	3.8908845E-5	45.000004	34
TCGCTCC	30	2.1655633E-6	45.000004	23
TCTCGAT	30	2.1655633E-6	45.000004	14
CCGCGGA	25	3.8908845E-5	45.000004	23
CGCGTTC	25	3.8908845E-5	45.000004	32
ACGACAG	60	0.0	45.000004	1
ACGCGTT	30	2.1655633E-6	45.000004	10
CGGAATT	20	7.0333836E-4	45.0	29
GTACCGT	20	7.0333836E-4	45.0	10
CGAACAA	35	1.2119744E-7	45.0	39
GTCGAGC	20	7.0333836E-4	45.0	25
ACGTTAT	20	7.0333836E-4	45.0	20