##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548112_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2197211 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.454357819981787 31.0 31.0 33.0 30.0 34.0 2 31.840092280623026 31.0 31.0 34.0 30.0 34.0 3 31.89581519480833 33.0 31.0 34.0 30.0 34.0 4 35.63677908038873 37.0 35.0 37.0 33.0 37.0 5 35.536359503024514 37.0 35.0 37.0 33.0 37.0 6 35.60151118850215 37.0 35.0 37.0 33.0 37.0 7 36.0394422747747 37.0 35.0 37.0 35.0 37.0 8 36.084126194525695 37.0 35.0 37.0 35.0 37.0 9 37.92348481779857 39.0 38.0 39.0 35.0 39.0 10 37.27538911829588 39.0 37.0 39.0 34.0 39.0 11 36.860116301984654 39.0 37.0 39.0 32.0 39.0 12 36.409988844949346 38.0 35.0 39.0 32.0 39.0 13 36.198816590668805 39.0 35.0 39.0 32.0 39.0 14 37.13704555456895 39.0 35.0 41.0 31.0 41.0 15 37.36963769069061 39.0 35.0 41.0 32.0 41.0 16 37.49416874392127 39.0 35.0 41.0 32.0 41.0 17 37.445498406843946 39.0 35.0 41.0 32.0 41.0 18 37.371570140509945 39.0 36.0 41.0 32.0 41.0 19 37.32673147913423 39.0 35.0 41.0 32.0 41.0 20 37.16559310871828 39.0 35.0 41.0 32.0 41.0 21 37.052186612937945 39.0 35.0 41.0 32.0 41.0 22 37.0239899581788 39.0 35.0 41.0 32.0 41.0 23 36.948025474112406 39.0 35.0 41.0 32.0 41.0 24 36.960804401580006 39.0 35.0 41.0 32.0 41.0 25 36.94792989840302 39.0 35.0 41.0 32.0 41.0 26 36.83550419144998 39.0 35.0 41.0 31.0 41.0 27 36.79336258556871 39.0 35.0 41.0 31.0 41.0 28 36.75356212944501 38.0 35.0 41.0 31.0 41.0 29 36.686723305135466 38.0 35.0 41.0 31.0 41.0 30 36.58425021538669 38.0 35.0 41.0 31.0 41.0 31 36.49272373021981 38.0 35.0 41.0 30.0 41.0 32 36.38774291590566 38.0 35.0 41.0 30.0 41.0 33 36.296700680999685 38.0 35.0 41.0 30.0 41.0 34 36.16547250127548 38.0 35.0 41.0 30.0 41.0 35 36.07326924906165 38.0 35.0 41.0 30.0 41.0 36 35.914141609522254 38.0 35.0 41.0 29.0 41.0 37 35.837675580542786 38.0 35.0 40.0 29.0 41.0 38 35.69590130397126 38.0 35.0 40.0 28.0 41.0 39 35.617693976591234 38.0 35.0 40.0 27.0 41.0 40 35.478720068304774 38.0 35.0 40.0 27.0 41.0 41 35.41132690488078 38.0 34.0 40.0 27.0 41.0 42 35.38774382615051 38.0 34.0 40.0 27.0 41.0 43 35.30009179819326 38.0 34.0 40.0 26.0 41.0 44 35.14034701264467 38.0 34.0 40.0 26.0 41.0 45 35.13650350376 38.0 34.0 40.0 26.0 41.0 46 35.07762522579761 38.0 34.0 40.0 26.0 41.0 47 34.963227473374204 38.0 34.0 40.0 25.0 41.0 48 34.8486276465938 37.0 34.0 40.0 24.0 41.0 49 34.73549103841188 37.0 34.0 40.0 24.0 41.0 50 34.5638047506589 37.0 34.0 40.0 24.0 41.0 51 34.21784935538735 37.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 0.0 11 1.0 12 1.0 13 3.0 14 11.0 15 48.0 16 128.0 17 343.0 18 778.0 19 1564.0 20 2758.0 21 4560.0 22 6994.0 23 10468.0 24 15563.0 25 22237.0 26 29566.0 27 35105.0 28 38939.0 29 44285.0 30 52774.0 31 64170.0 32 79795.0 33 102406.0 34 162016.0 35 234462.0 36 155159.0 37 202532.0 38 314921.0 39 615517.0 40 105.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.13173427586153 24.513257943820598 30.70624532646159 12.648762453856275 2 29.354395185532933 26.159845367604657 31.011723498562493 13.474035948299912 3 28.672712816384045 25.274586737459444 32.93552599181417 13.117174454342345 4 25.655342158763993 27.138540631737236 32.67810874786263 14.528008461636139 5 23.330986418691698 31.85074169026097 30.678846956437045 14.139424934610286 6 21.43553805255845 40.641613390794056 27.318086428658876 10.604762127988618 7 89.9341483362317 2.6053483256728645 6.012303779655208 1.4481995584402225 8 91.00295784064436 1.7215915995323163 5.61006657985965 1.6653839799636903 9 86.44964002091743 4.523871398786917 6.814548079360608 2.2119405009350492 10 42.86884600523118 36.03977952049212 12.188224071334067 8.90315040294264 11 30.230460342679876 23.616484716306264 28.850711197058455 17.302343743955404 12 31.45765245122112 22.171379990360506 28.13070751966925 18.240260038749124 13 24.36479700857132 27.57341010945239 29.658098380173776 18.403694501802512 14 16.860237819672303 31.788298893460848 31.013498476022555 20.33796481084429 15 15.830159233683064 29.892577453872203 37.86204420057974 16.415219111864996 16 22.043354052023222 27.19024253929186 34.602958022693315 16.163445385991604 17 21.979773449158955 26.923631822342053 27.37292868095053 23.723666047548463 18 22.08645414573293 28.184685039352157 31.784930987510982 17.943929827403924 19 25.20017422086454 29.5451825063683 26.83529255952205 18.41935071324511 20 25.16995409180092 30.57421431077853 27.302566753943978 16.95326484347657 21 23.267587864797694 28.155284130654724 31.847874418979334 16.729253585568248 22 22.755711672661388 23.06469428743985 31.882600260056954 22.29699377984181 23 19.402961299574777 28.227056937180816 31.456378108429277 20.913603654815127 24 19.064987386281974 27.706169321016503 34.612652130359805 18.616191162341714 25 20.145493537033996 29.581910886118813 30.354253642458552 19.918341934388643 26 18.00559891608043 33.72156793316618 27.202803918239987 21.0700292325134 27 18.000501544913075 32.925103688266624 30.90736392635937 18.167030840460928 28 15.959186441356794 30.111855438553693 33.66713529105762 20.261822829031896 29 17.201852712370364 28.565531485141847 33.50675014825613 20.725865654231658 30 20.195602516098816 29.391533175466535 31.348149995608072 19.064714312826577 31 23.2532515083895 28.238981144733028 28.325454405607836 20.182312941269636 32 24.14720297686476 28.35408160618165 27.848531615761985 19.650183801191602 33 23.244877255757412 27.90114376816792 28.21376736235164 20.640211613723032 34 17.84070806126494 28.2229608353499 30.820845153241994 23.115485950143157 35 18.517247547003908 28.77083721135567 29.923207193118913 22.78870804852151 36 23.26508469145658 27.730108760606058 28.918569950723892 20.086236597213468 37 18.518248816340353 31.519958711293544 29.93540447412652 20.026387998239585 38 19.06184704154494 30.247846019339974 27.787181112783433 22.903125826331657 39 18.529535852496643 29.405505433934202 29.087283833914906 22.977674879654252 40 21.821436357272926 27.58310421711888 28.916430875323307 21.679028550284883 41 17.942109337701297 26.468281835472336 30.066616269443397 25.522992557382974 42 19.547098571780317 27.10750128230743 29.480418585197327 23.864981560714924 43 19.877153354866692 27.398597585757578 29.273064808068046 23.45118425130768 44 19.35567407954903 29.226232710467954 28.91420077543759 22.50389243454543 45 18.346531125140007 31.390521893436723 26.226384266235698 24.036562715187575 46 20.15250242238911 30.214758618994715 27.627114555679906 22.00562440293627 47 18.5656725730938 28.05811549277698 30.296134508702167 23.080077425427053 48 19.447881882987115 27.5653089302757 30.724404711245302 22.262404475491884 49 19.83928716905204 26.989806623032564 30.408140137656332 22.76276607025907 50 18.2428087243328 28.69414908263248 30.127147552055767 22.935894640978947 51 17.491538136300974 30.337778210649773 27.90587704139475 24.264806611654503 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1073.0 1 2212.0 2 3351.0 3 13224.5 4 23098.0 5 15718.0 6 8338.0 7 7685.0 8 7032.0 9 7715.0 10 8398.0 11 8764.0 12 9130.0 13 9352.5 14 9575.0 15 9504.0 16 9433.0 17 9107.0 18 8781.0 19 9042.0 20 9303.0 21 10099.5 22 10896.0 23 11935.0 24 12974.0 25 16008.5 26 22386.0 27 25729.0 28 32419.0 29 39109.0 30 46551.0 31 53993.0 32 59769.0 33 65545.0 34 74290.5 35 83036.0 36 86703.5 37 90371.0 38 101859.0 39 113347.0 40 129520.5 41 145694.0 42 159478.5 43 173263.0 44 177300.5 45 181338.0 46 188791.5 47 196245.0 48 200124.0 49 204003.0 50 186930.0 51 169857.0 52 152854.5 53 135852.0 54 122916.5 55 109981.0 56 99083.5 57 88186.0 58 79156.5 59 70127.0 60 58104.0 61 46081.0 62 37487.5 63 28894.0 64 22489.5 65 16085.0 66 12456.0 67 8827.0 68 7254.5 69 5682.0 70 4202.0 71 2722.0 72 2118.5 73 1515.0 74 1144.0 75 483.0 76 193.0 77 168.5 78 144.0 79 112.0 80 80.0 81 66.5 82 53.0 83 39.0 84 25.0 85 19.0 86 13.0 87 10.5 88 8.0 89 6.5 90 5.0 91 4.5 92 4.0 93 3.0 94 2.0 95 1.5 96 1.0 97 2.0 98 3.0 99 1.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2197211.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.423018399148745 #Duplication Level Percentage of deduplicated Percentage of total 1 78.01713094714707 19.054138245709698 2 9.116361249883767 4.452981170783957 3 3.347780640138425 2.452887245112442 4 1.6024646439436012 1.565480939320797 5 0.9483551732966604 1.1580847923176116 6 0.6374067762682522 0.9340438454724964 7 0.46175013633274364 0.7894132452824826 8 0.35053749761367065 0.684894700304819 9 0.2916868416092028 0.6411485789470031 >10 3.236961874496163 18.6382096039892 >50 1.2132948634645024 21.522151321518344 >100 0.7706496500665827 26.156973301717596 >500 0.003559146968229354 0.5517914602681003 >1k 0.0018732352464365019 0.6321285636783303 >5k 0.0 0.0 >10k+ 1.873235246436502E-4 0.7656729855772263 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 16736 0.7616928915793704 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 2730 0.12424842220433086 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 9.102448513137791E-5 0.0 0.0 0.08920399542875036 0.0 2 9.102448513137791E-5 0.0 0.0 0.2964212358303322 0.0 3 9.102448513137791E-5 0.0 0.0 0.4484321259997333 0.0 4 9.102448513137791E-5 0.0 0.0 0.6561955133121034 0.0 5 9.102448513137791E-5 0.0 0.0 1.2095788706683155 0.0 6 9.102448513137791E-5 0.0 0.0 1.71226158980635 0.0 7 9.102448513137791E-5 0.0 0.0 2.0678032287295123 0.0 8 9.102448513137791E-5 0.0 0.0 2.777202553600906 0.0 9 9.102448513137791E-5 0.0 0.0 3.033390967003169 0.0 10 9.102448513137791E-5 0.0 0.0 3.485828170348683 0.0 11 9.102448513137791E-5 0.0 0.0 4.198458864442241 0.0 12 9.102448513137791E-5 0.0 0.0 4.723761168135423 0.0 13 9.102448513137791E-5 0.0 0.0 4.9374866592238975 0.0 14 9.102448513137791E-5 0.0 0.0 5.0400712539669605 0.0 15 9.102448513137791E-5 0.0 0.0 5.174377881778309 0.0 16 9.102448513137791E-5 0.0 0.0 5.445175725044158 0.0 17 9.102448513137791E-5 0.0 0.0 5.8122319613364395 0.0 18 9.102448513137791E-5 0.0 0.0 6.202499441337222 0.0 19 9.102448513137791E-5 0.0 0.0 6.497828383345978 0.0 20 9.102448513137791E-5 0.0 0.0 6.7897894194048725 0.0 21 9.102448513137791E-5 0.0 0.0 7.151657260044666 0.0 22 9.102448513137791E-5 0.0 0.0 7.582248586958649 0.0 23 9.102448513137791E-5 0.0 0.0 7.987398570278412 0.0 24 9.102448513137791E-5 0.0 0.0 8.287961420182222 0.0 25 9.102448513137791E-5 0.0 0.0 8.539826170540744 0.0 26 9.102448513137791E-5 0.0 0.0 8.786866623187304 0.0 27 9.102448513137791E-5 0.0 0.0 9.070453406614112 0.0 28 9.102448513137791E-5 0.0 0.0 9.355041459377365 0.0 29 9.102448513137791E-5 0.0 0.0 9.684049460884731 0.0 30 9.102448513137791E-5 0.0 0.0 10.104582582191696 0.0 31 9.102448513137791E-5 0.0 0.0 10.442556495484503 0.0 32 9.102448513137791E-5 0.0 0.0 10.742163588294433 0.0 33 9.102448513137791E-5 0.0 0.0 11.039039946550423 0.0 34 9.102448513137791E-5 0.0 0.0 11.360447403549317 0.0 35 9.102448513137791E-5 0.0 0.0 11.721040901397272 0.0 36 9.102448513137791E-5 0.0 0.0 12.038852891233477 0.0 37 9.102448513137791E-5 0.0 0.0 12.378556269743779 0.0 38 9.102448513137791E-5 0.0 0.0 12.773420486243698 0.0 39 9.102448513137791E-5 0.0 0.0 13.482273664204303 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTAACG 55 1.8189894E-12 45.0 1 CGTATTA 20 7.0346927E-4 45.0 41 GCGCCTA 25 3.891971E-5 45.0 20 GAGCGTA 35 1.2126111E-7 45.0 9 ACTACGC 20 7.0346927E-4 45.0 21 CGTCGAG 25 3.891971E-5 45.0 37 TCGACTA 20 7.0346927E-4 45.0 30 TCGACCG 25 3.891971E-5 45.0 13 TACGCGG 125 0.0 44.999996 2 TACGTAG 175 0.0 43.714287 1 CGGTCTA 570 0.0 43.421055 31 TCTAGCG 105 0.0 42.857143 1 CGACCCG 100 0.0 42.75 32 ACGTAGG 385 0.0 42.662334 2 CGTTTTT 5985 0.0 42.5188 1 CGGGTAT 150 0.0 42.0 6 CTATGCG 70 0.0 41.785713 1 CGTTAGG 330 0.0 41.59091 2 TAGTACG 65 0.0 41.53846 1 TCACGAC 605 0.0 41.280994 25 >>END_MODULE