SRR1548111_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1548111_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1716612
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6665	0.38826479134481173	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTCCGTA	20	7.0342596E-4	45.000004	30
CCCGTAA	20	7.0342596E-4	45.000004	29
ACCGTTA	20	7.0342596E-4	45.000004	42
TACCGTA	20	7.0342596E-4	45.000004	45
AGTCGAC	20	7.0342596E-4	45.000004	28
ACGGTCG	20	7.0342596E-4	45.000004	31
GTCGATC	35	1.2123928E-7	45.0	44
CGTTCGG	35	1.2123928E-7	45.0	2
TAGTGCG	165	0.0	45.0	1
TAGTCCG	45	3.8562575E-10	45.0	1
TATATCG	30	2.1661308E-6	44.999996	40
CCTGTCG	30	2.1661308E-6	44.999996	9
CTACGCG	30	2.1661308E-6	44.999996	1
CGGTCTA	440	0.0	43.977272	31
TATCGCG	175	0.0	43.714287	1
CTAGCGG	165	0.0	43.636364	2
ACGTTAG	100	0.0	42.75	1
AATGCGG	330	0.0	42.272728	2
TTCGCGG	160	0.0	42.187504	2
GCGAACG	75	0.0	42.0	1