SRR1548107_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1548107_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1782057
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5957	0.33427662527068436	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	2675	0.15010743202939075	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTTAGCG	85	0.0	45.000004	1
TACGATC	30	2.1661763E-6	45.000004	39
ACGTGCC	35	1.2124292E-7	45.000004	19
GTCGTGC	35	1.2124292E-7	45.000004	23
ATGCGTA	35	1.2124292E-7	45.000004	41
CGACTTA	30	2.1661763E-6	45.000004	14
GTAGTAT	35	1.2124292E-7	45.000004	9
GTTGCGA	30	2.1661763E-6	45.000004	9
CGTTCGA	20	7.0343335E-4	45.0	29
TTATCGA	20	7.0343335E-4	45.0	45
CATACCG	25	3.8916733E-5	45.0	1
ACGCTCC	20	7.0343335E-4	45.0	14
GCGATAC	100	0.0	45.0	9
TTACGAG	55	1.8189894E-12	45.0	1
TGTACGT	40	6.8193913E-9	45.0	23
TTACCGA	20	7.0343335E-4	45.0	22
GATTACG	40	6.8193913E-9	45.0	1
CCGTTCA	20	7.0343335E-4	45.0	29
ATCGACG	20	7.0343335E-4	45.0	1
TTGTACG	115	0.0	43.04348	1