##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548107_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1782057 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.48250252376888 31.0 31.0 33.0 30.0 34.0 2 31.875300846156996 31.0 31.0 34.0 30.0 34.0 3 31.96306515448159 33.0 31.0 34.0 30.0 34.0 4 35.679137648234594 37.0 35.0 37.0 33.0 37.0 5 35.56591736403493 37.0 35.0 37.0 33.0 37.0 6 35.6277627483296 37.0 35.0 37.0 33.0 37.0 7 36.03452583166532 37.0 35.0 37.0 35.0 37.0 8 36.07176818698841 37.0 35.0 37.0 35.0 37.0 9 37.86644366594334 39.0 38.0 39.0 35.0 39.0 10 37.24380308822894 39.0 37.0 39.0 34.0 39.0 11 36.905413238746014 39.0 37.0 39.0 33.0 39.0 12 36.15222577055616 38.0 35.0 39.0 32.0 39.0 13 35.8366023084559 38.0 35.0 39.0 31.0 39.0 14 36.809902825779425 39.0 35.0 41.0 31.0 41.0 15 37.06839960786888 39.0 35.0 41.0 32.0 41.0 16 37.228429281442736 39.0 35.0 41.0 32.0 41.0 17 37.1680709427364 39.0 35.0 41.0 32.0 41.0 18 37.13403611668987 38.0 35.0 41.0 32.0 41.0 19 37.087520769537676 38.0 35.0 41.0 32.0 41.0 20 36.96387545403991 38.0 35.0 41.0 32.0 41.0 21 36.826000515135036 38.0 35.0 41.0 32.0 41.0 22 36.74418046111881 38.0 35.0 41.0 31.0 41.0 23 36.67939970494771 38.0 35.0 40.0 31.0 41.0 24 36.71046605131037 38.0 35.0 41.0 31.0 41.0 25 36.68799033925402 38.0 35.0 41.0 31.0 41.0 26 36.53860398404765 38.0 35.0 40.0 31.0 41.0 27 36.452539958037256 38.0 35.0 40.0 31.0 41.0 28 36.458194098168576 38.0 35.0 40.0 31.0 41.0 29 36.421494935347184 38.0 35.0 40.0 31.0 41.0 30 36.34624762283137 38.0 35.0 40.0 31.0 41.0 31 36.25811463943072 38.0 35.0 40.0 30.0 41.0 32 36.14085688617143 38.0 35.0 40.0 30.0 41.0 33 36.061784219023295 38.0 35.0 40.0 30.0 41.0 34 35.96879112172057 38.0 35.0 40.0 30.0 41.0 35 35.86874718373206 38.0 35.0 40.0 30.0 41.0 36 35.69822457979739 38.0 35.0 40.0 29.0 41.0 37 35.62989511558833 38.0 34.0 40.0 29.0 41.0 38 35.55496204666854 38.0 34.0 40.0 29.0 41.0 39 35.516971679357056 38.0 34.0 40.0 29.0 41.0 40 35.391622153500144 38.0 34.0 40.0 27.0 41.0 41 35.34494126731075 38.0 34.0 40.0 27.0 41.0 42 35.3069711013733 37.0 34.0 40.0 27.0 41.0 43 35.209211040948745 37.0 34.0 40.0 27.0 41.0 44 35.040214763051914 37.0 34.0 40.0 27.0 41.0 45 35.011555185945234 37.0 34.0 40.0 27.0 41.0 46 34.922936247269305 37.0 34.0 40.0 26.0 41.0 47 34.84298538150014 37.0 34.0 40.0 26.0 41.0 48 34.73258206667912 36.0 34.0 40.0 26.0 41.0 49 34.63650377064258 36.0 34.0 40.0 26.0 41.0 50 34.459862956123175 36.0 34.0 40.0 24.0 41.0 51 34.08640632707035 36.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 4.0 12 2.0 13 4.0 14 10.0 15 35.0 16 117.0 17 265.0 18 583.0 19 1168.0 20 2160.0 21 3574.0 22 5761.0 23 8505.0 24 12277.0 25 17157.0 26 22587.0 27 26920.0 28 31183.0 29 36028.0 30 43906.0 31 53556.0 32 67776.0 33 87701.0 34 152456.0 35 242649.0 36 119554.0 37 153607.0 38 241206.0 39 451219.0 40 86.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.24738939326857 24.54736296313754 29.831425145211405 11.373822498382486 2 30.302509964608316 25.703442706939228 30.287807853508614 13.706239474943843 3 29.22667456764851 25.852315610555664 31.13519937914444 13.785810442651385 4 27.185269606976657 27.752703757511682 30.123503344730274 14.938523290781383 5 23.417937810070047 31.60746261202644 30.0364129766893 14.938186601214214 6 22.089865812373006 41.2888027711796 26.398650548214786 10.22268086823261 7 89.3136414828482 3.7833806662749847 5.20297611131406 1.7000017395627638 8 90.37589706726553 2.688353963986562 4.980087617848363 1.9556613508995502 9 84.79122721663785 5.909238593378326 6.474428146798895 2.825106043184926 10 46.832284264756964 29.21056958335227 13.736934340484058 10.220211811406706 11 39.84726638934669 22.029654494777663 23.02322540749258 15.099853708383066 12 35.756039228823774 22.073592483293183 25.379378998539327 16.79098928934372 13 23.37714225751477 34.58492068435521 26.250394908804825 15.78754214932519 14 17.47620867345994 37.5612003431989 28.509806364218427 16.45278461912273 15 16.387298498308414 27.244975890221244 41.1832505918722 15.184475019598139 16 19.237992948598166 23.41288746656252 39.863932522921544 17.485187061917774 17 19.79375519413801 23.631679570294327 27.256198875793537 29.318366359774128 18 22.634292842484836 25.764383518596766 32.39396944093259 19.20735419798581 19 27.456753627970375 27.72318730545656 25.779534549119358 19.040524517453704 20 28.76793503238112 26.422555507483768 26.021951037480846 18.787558422654268 21 23.78324599044812 28.288994123083604 29.351193592573075 18.5765662938952 22 23.191626306004803 23.97891874390101 28.38955207381133 24.439902876282858 23 19.907275693201733 29.68962272250551 27.065183661353142 23.337917922939614 24 19.90188866012703 26.23664675147877 35.10084133111342 18.760623257280773 25 19.029301531881416 27.366913628464186 32.84378670267 20.759998136984397 26 18.90377243825534 33.82512456111112 26.99055080729741 20.280552193336128 27 18.363497912805258 34.26298934321405 29.229929233464475 18.14358351051622 28 16.84042654078966 29.388510019600943 35.8066548937548 17.964408545854592 29 17.597080228073516 27.247669406758597 35.10381542229008 20.051434942877812 30 19.2624029422179 30.11547891004609 31.341982888313897 19.280135259422117 31 26.579172271145087 27.208669531894884 27.40333221664627 18.808825980313763 32 27.62784804301995 27.28117001869188 26.97893501723009 18.11204692105808 33 25.414058023957708 27.829132289258986 26.532091846669324 20.224717840113982 34 19.29713808256414 28.479335958389658 28.995873869354348 23.227652089691855 35 20.2725838735798 26.28108977434504 30.854793084620752 22.59153326745441 36 27.07275917661444 25.23319961146024 28.449595046623088 19.244446165302232 37 19.587140029752135 30.963936619311276 30.34201487382278 19.10690847711381 38 19.64650962342955 31.318190158900645 27.060638352196364 21.97466186547344 39 19.629338455503948 30.0582416836274 29.723852828500995 20.588567032367653 40 23.386962369890526 26.550946462430776 27.253617589111904 22.80847357856679 41 18.393968318634027 24.477668222733616 29.410058151899744 27.71830530673261 42 20.62397555184823 25.59457974688801 28.697623027770717 25.083821673493045 43 21.36278469207214 25.781274111883068 28.477203591130923 24.378737604913873 44 19.72501440750773 29.60444026201182 28.765578205410936 21.904967125069515 45 18.697830653003805 33.792858477590784 25.626509140841176 21.88280172856424 46 21.687970699029268 30.874152734732952 27.189702686277712 20.248173879960067 47 20.336723236125444 27.680708305065437 28.365085965263738 23.61748249354538 48 21.051683532008237 25.666406854550665 31.996282947178457 21.28562666626264 49 21.186022669308556 24.6421971912234 31.735741337117723 22.436038802350318 50 19.56531132281403 30.524500619228228 28.48057048680261 21.42961757115513 51 18.863425805122958 31.2758795032931 26.948015691978426 22.91267899960551 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 623.0 1 1608.5 2 2594.0 3 6214.5 4 9835.0 5 7285.0 6 4735.0 7 4610.0 8 4485.0 9 4928.0 10 5371.0 11 5545.0 12 5719.0 13 5599.5 14 5480.0 15 5403.0 16 5326.0 17 4805.0 18 4284.0 19 4654.0 20 5024.0 21 6041.0 22 7058.0 23 6949.0 24 6840.0 25 9694.0 26 15052.0 27 17556.0 28 20992.5 29 24429.0 30 29457.0 31 34485.0 32 38009.0 33 41533.0 34 48829.5 35 56126.0 36 60886.5 37 65647.0 38 76377.5 39 87108.0 40 107876.5 41 128645.0 42 152204.0 43 175763.0 44 177273.5 45 178784.0 46 174360.0 47 169936.0 48 164909.5 49 159883.0 50 151544.5 51 143206.0 52 123928.5 53 104651.0 54 95641.5 55 86632.0 56 76283.5 57 65935.0 58 58505.0 59 51075.0 60 45187.5 61 39300.0 62 33138.0 63 26976.0 64 22980.0 65 18984.0 66 14900.0 67 10816.0 68 8633.0 69 6450.0 70 4952.0 71 3454.0 72 2789.0 73 2124.0 74 1778.5 75 969.0 76 505.0 77 411.5 78 318.0 79 273.5 80 229.0 81 146.5 82 64.0 83 51.0 84 38.0 85 28.0 86 18.0 87 18.5 88 19.0 89 11.0 90 3.0 91 5.0 92 7.0 93 4.5 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1782057.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.48022794022988 #Duplication Level Percentage of deduplicated Percentage of total 1 79.87926236737994 17.158247633487473 2 8.787140427179622 3.774995586372544 3 2.909445574136892 1.874866623364603 4 1.3605959099012714 1.1690364111689513 5 0.8134731393797304 0.8736794228565501 6 0.5119400809341818 0.6597953778123574 7 0.38681066173077167 0.5816146828581692 8 0.3123191780971962 0.536694970850642 9 0.23488556543103298 0.45408559367955315 >10 2.497399285777727 12.543666453107011 >50 1.043896155696799 16.512428024307418 >100 1.2562844143389649 42.522482556588926 >500 0.005761571214009132 0.7795183732664281 >1k 5.237792012735574E-4 0.2237803340444433 >5k 2.618896006367787E-4 0.3351079562349796 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5957 0.33427662527068436 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2675 0.15010743202939075 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.611492786145449E-5 0.0 0.0 0.05993074295603339 0.0 2 5.611492786145449E-5 0.0 0.0 0.22900502060259575 0.0 3 5.611492786145449E-5 0.0 0.0 0.3319759132283647 0.0 4 5.611492786145449E-5 0.0 0.0 0.4862919648473646 0.0 5 5.611492786145449E-5 0.0 0.0 0.8703986460590205 0.0 6 5.611492786145449E-5 0.0 0.0 1.1765616924711162 0.0 7 5.611492786145449E-5 0.0 0.0 1.3725711354911767 0.0 8 5.611492786145449E-5 0.0 0.0 1.8472473102712204 0.0 9 5.611492786145449E-5 0.0 0.0 1.9710929560614503 0.0 10 5.611492786145449E-5 0.0 0.0 2.2587941912071274 0.0 11 5.611492786145449E-5 0.0 0.0 2.724323632745754 0.0 12 5.611492786145449E-5 0.0 0.0 3.0589930625114685 0.0 13 5.611492786145449E-5 0.0 0.0 3.1967552104113395 0.0 14 5.611492786145449E-5 0.0 0.0 3.252870138272794 0.0 15 5.611492786145449E-5 0.0 0.0 3.3571877891672375 0.0 16 5.611492786145449E-5 0.0 0.0 3.617897744011555 0.0 17 5.611492786145449E-5 0.0 0.0 3.9243974799908194 0.0 18 5.611492786145449E-5 0.0 0.0 4.275733043331386 0.0 19 5.611492786145449E-5 0.0 0.0 4.481843173366508 0.0 20 5.611492786145449E-5 0.0 0.0 4.688177763113076 0.0 21 5.611492786145449E-5 0.0 0.0 4.984464582221556 0.0 22 5.611492786145449E-5 0.0 0.0 5.30134557985519 0.0 23 5.611492786145449E-5 0.0 0.0 5.661435071942143 0.0 24 5.611492786145449E-5 0.0 0.0 5.911763765132092 0.0 25 5.611492786145449E-5 0.0 0.0 6.137233545279416 0.0 26 5.611492786145449E-5 0.0 0.0 6.361188222374481 0.0 27 5.611492786145449E-5 0.0 0.0 6.588958714564124 0.0 28 5.611492786145449E-5 0.0 0.0 6.8310946282863005 0.0 29 5.611492786145449E-5 0.0 0.0 7.086810354550948 0.0 30 5.611492786145449E-5 0.0 0.0 7.395723032428256 0.0 31 5.611492786145449E-5 0.0 0.0 7.684714910914746 0.0 32 5.611492786145449E-5 0.0 0.0 7.943460843283913 0.0 33 5.611492786145449E-5 0.0 0.0 8.211634083533804 0.0 34 5.611492786145449E-5 0.0 0.0 8.479695093927972 0.0 35 5.611492786145449E-5 0.0 0.0 8.80673289350453 0.0 36 5.611492786145449E-5 0.0 0.0 9.088317601513307 0.0 37 5.611492786145449E-5 0.0 0.0 9.373774239544526 0.0 38 5.611492786145449E-5 0.0 0.0 9.684202020474093 0.0 39 5.611492786145449E-5 0.0 0.0 10.057478520608488 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTTAGCG 85 0.0 45.000004 1 TACGATC 30 2.1661763E-6 45.000004 39 ACGTGCC 35 1.2124292E-7 45.000004 19 GTCGTGC 35 1.2124292E-7 45.000004 23 ATGCGTA 35 1.2124292E-7 45.000004 41 CGACTTA 30 2.1661763E-6 45.000004 14 GTAGTAT 35 1.2124292E-7 45.000004 9 GTTGCGA 30 2.1661763E-6 45.000004 9 CGTTCGA 20 7.0343335E-4 45.0 29 TTATCGA 20 7.0343335E-4 45.0 45 CATACCG 25 3.8916733E-5 45.0 1 ACGCTCC 20 7.0343335E-4 45.0 14 GCGATAC 100 0.0 45.0 9 TTACGAG 55 1.8189894E-12 45.0 1 TGTACGT 40 6.8193913E-9 45.0 23 TTACCGA 20 7.0343335E-4 45.0 22 GATTACG 40 6.8193913E-9 45.0 1 CCGTTCA 20 7.0343335E-4 45.0 29 ATCGACG 20 7.0343335E-4 45.0 1 TTGTACG 115 0.0 43.04348 1 >>END_MODULE