##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548106_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1937248 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.55267833545318 31.0 31.0 33.0 30.0 34.0 2 31.961079324897998 31.0 31.0 34.0 30.0 34.0 3 31.954388390128678 33.0 31.0 34.0 30.0 34.0 4 35.73806193115182 37.0 35.0 37.0 35.0 37.0 5 35.705916846991194 37.0 35.0 37.0 33.0 37.0 6 35.77971483258726 37.0 35.0 37.0 35.0 37.0 7 36.06193579758503 37.0 35.0 37.0 35.0 37.0 8 36.076114157815624 37.0 35.0 37.0 35.0 37.0 9 37.88882941161896 39.0 38.0 39.0 35.0 39.0 10 37.41977330728952 39.0 37.0 39.0 35.0 39.0 11 37.16700804440113 39.0 37.0 39.0 33.0 39.0 12 36.812266679330676 39.0 35.0 39.0 33.0 39.0 13 36.70338800194916 39.0 35.0 39.0 33.0 39.0 14 37.82392961561968 40.0 36.0 41.0 33.0 41.0 15 37.9361620195246 40.0 36.0 41.0 33.0 41.0 16 37.98951141000016 40.0 36.0 41.0 33.0 41.0 17 37.907980805761575 40.0 36.0 41.0 33.0 41.0 18 37.772760637770695 39.0 36.0 41.0 33.0 41.0 19 37.68602213036225 39.0 36.0 41.0 33.0 41.0 20 37.55080867292159 39.0 35.0 41.0 33.0 41.0 21 37.45360015857546 39.0 35.0 41.0 32.0 41.0 22 37.379668994367265 39.0 35.0 41.0 32.0 41.0 23 37.264178360230595 39.0 35.0 41.0 32.0 41.0 24 37.26408234774278 39.0 35.0 41.0 32.0 41.0 25 37.24315007680999 39.0 35.0 41.0 32.0 41.0 26 37.13350691289912 39.0 35.0 41.0 32.0 41.0 27 37.07586586745734 39.0 35.0 41.0 32.0 41.0 28 36.99355683939279 39.0 35.0 41.0 32.0 41.0 29 36.91064953996597 39.0 35.0 41.0 31.0 41.0 30 36.78255133054725 39.0 35.0 41.0 31.0 41.0 31 36.696550467467254 39.0 35.0 41.0 31.0 41.0 32 36.53876788103537 39.0 35.0 41.0 30.0 41.0 33 36.37491689241646 39.0 35.0 41.0 30.0 41.0 34 36.1645199788566 39.0 35.0 41.0 29.0 41.0 35 35.97268031764648 39.0 35.0 41.0 29.0 41.0 36 35.82957215596558 39.0 35.0 41.0 27.0 41.0 37 35.77145259667322 39.0 35.0 41.0 27.0 41.0 38 35.6523165851765 38.0 35.0 41.0 27.0 41.0 39 35.56889463816713 38.0 35.0 41.0 26.0 41.0 40 35.4413317241778 38.0 35.0 40.0 26.0 41.0 41 35.352800467467254 38.0 35.0 40.0 25.0 41.0 42 35.2954247468574 38.0 34.0 40.0 25.0 41.0 43 35.19843768066866 38.0 34.0 40.0 25.0 41.0 44 35.029383950841606 38.0 34.0 40.0 24.0 41.0 45 34.99227099473067 38.0 34.0 40.0 24.0 41.0 46 34.89411371182213 38.0 34.0 40.0 24.0 41.0 47 34.819444903285486 38.0 34.0 40.0 23.0 41.0 48 34.693228228910286 38.0 34.0 40.0 23.0 41.0 49 34.5747963089909 37.0 34.0 40.0 24.0 41.0 50 34.45123133434645 37.0 34.0 40.0 23.0 41.0 51 34.09160778589009 37.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 5.0 11 6.0 12 17.0 13 16.0 14 25.0 15 63.0 16 139.0 17 321.0 18 689.0 19 1456.0 20 2558.0 21 4139.0 22 6297.0 23 9366.0 24 14049.0 25 21078.0 26 29129.0 27 33534.0 28 35068.0 29 37596.0 30 42735.0 31 50655.0 32 61828.0 33 79439.0 34 126781.0 35 173748.0 36 139927.0 37 188171.0 38 301792.0 39 576527.0 40 93.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.32149523447695 23.714465055584004 28.28961495895208 14.674424750986967 2 33.91527569005104 24.59607649614298 28.211566097887314 13.277081715918666 3 29.409037975519915 24.544611737887973 32.68110226465584 13.36524802193627 4 26.221268521118617 26.945336890269083 31.924668395579708 14.90872619303259 5 23.198785080691785 31.089359751565105 30.40607087992864 15.305784287814467 6 22.101145542542824 39.4740373973802 28.223799947141515 10.201017112935464 7 86.19701762500208 3.8040044434166407 8.18862634004526 1.8103515915360346 8 86.50823229653611 3.3515584994796748 8.33032218900213 1.8098870149820776 9 80.44401129850179 6.5642086093262195 10.048171426683625 2.943608665488363 10 36.75703885098862 37.3270742826938 16.154462412659605 9.761424453657973 11 29.683499479674257 23.963994284675994 29.985267761277857 16.36723847437189 12 28.741080130164026 22.275206891425363 31.580159071012076 17.403553907398535 13 24.57006020912139 24.939759906836915 31.95739523282512 18.532784651216573 14 19.433701828573316 28.232007466261415 32.57920514048795 19.755085564677316 15 18.909298138390128 27.39716339880077 35.79118419531211 17.902354267496985 16 24.106877384826312 25.902052808933085 33.32867036125473 16.662399444985876 17 23.54566890764631 25.66016328317283 30.314910636118864 20.479257173061992 18 23.480576570475233 26.116325839541453 31.892973950676424 18.510123639306894 19 24.64237929268736 27.283032425378686 29.349417317762104 18.725170964171856 20 26.272423561670987 26.96366185434183 29.511812633178614 17.25210195080857 21 25.732172649036155 26.456705594740583 31.29640603577859 16.514715720444674 22 24.636236558251706 23.73934571102925 32.068170931135306 19.55624679958374 23 22.337356910421384 26.078695138670938 32.104253043492626 19.479694907415055 24 21.571373412180577 26.140277341878786 33.53251622920762 18.755833016733014 25 21.957901105072764 27.301667107154064 30.74082409686318 19.999607690909993 26 20.883593633855863 29.108715043195293 29.62057516642165 20.387116156527195 27 19.764790052693304 28.835544029468608 31.80134913031269 19.5983167875254 28 18.705555509671452 28.13904053585292 33.43655536100695 19.718848593468675 29 20.632154478930936 26.978425064834237 32.53300558317779 19.856414873057037 30 21.314720675927916 27.201628289202002 32.24212904078363 19.241521994086458 31 23.7437849981004 26.477456680817323 30.315426832289926 19.46333148879235 32 24.678461405044683 26.886129189448127 29.761909678058775 18.673499727448423 33 23.826118287384993 26.742729893126743 29.479240654784515 19.951911164703745 34 21.053628652604107 27.098285815755137 31.87217124498257 19.975914286658185 35 21.16956631262492 28.096093014420454 30.668195295594575 20.066145377360048 36 22.993029286905962 29.121929665174516 28.862799187300748 19.022241860618774 37 22.152971638117577 29.353288789045077 29.028859495531805 19.464880077305537 38 21.42947108475528 30.024756768364195 28.542551082773088 20.003221064107436 39 21.247924891392326 29.006766299410298 28.7914608764598 20.953847932737574 40 22.74969441186673 27.528173987016636 28.958398718181666 20.763732882934967 41 20.285993326615902 27.26460422207172 30.082209402203535 22.367193049108838 42 20.601957002923736 27.946086407109465 28.60470110176911 22.84725548819769 43 20.765591189150793 27.570708551512247 28.95793414162771 22.705766117709246 44 20.638193974132378 27.998841655792134 29.141545119674923 22.22141925040057 45 20.53469664183419 29.230847057268868 28.299474305819388 21.934981995077553 46 21.54432473281686 29.24602322469813 28.567173640132808 20.6424784023522 47 20.40760914451841 28.277071391995246 30.378351145542542 20.936968317943805 48 20.711235732337833 27.660010489106195 30.59783775747865 21.030916021077324 49 20.90991963858009 27.456164621153306 30.411387700490593 21.222528039776012 50 20.29864013280695 28.06682469152117 30.786507458002276 20.848027717669602 51 19.964867688597433 28.41819942516394 29.793346024876527 21.823586861362095 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 905.0 1 2101.5 2 3298.0 3 17301.0 4 31304.0 5 22436.0 6 13568.0 7 12277.5 8 10987.0 9 11006.5 10 11026.0 11 10779.5 12 10533.0 13 10254.5 14 9976.0 15 9610.5 16 9245.0 17 9044.0 18 8843.0 19 8494.0 20 8145.0 21 9755.0 22 11365.0 23 12216.0 24 13067.0 25 16364.5 26 23750.5 27 27839.0 28 32510.5 29 37182.0 30 41086.0 31 44990.0 32 53698.0 33 62406.0 34 68925.0 35 75444.0 36 78533.5 37 81623.0 38 87920.0 39 94217.0 40 101827.0 41 109437.0 42 118192.0 43 126947.0 44 129739.5 45 132532.0 46 134899.0 47 137266.0 48 137736.5 49 138207.0 50 134493.0 51 130779.0 52 122755.0 53 114731.0 54 104309.0 55 93887.0 56 89170.0 57 84453.0 58 80475.5 59 76498.0 60 70670.0 61 64842.0 62 57039.0 63 49236.0 64 42034.5 65 34833.0 66 29565.5 67 24298.0 68 19156.0 69 14014.0 70 11071.5 71 8129.0 72 6581.5 73 5034.0 74 4071.0 75 2443.5 76 1779.0 77 1307.5 78 836.0 79 607.0 80 378.0 81 280.5 82 183.0 83 136.0 84 89.0 85 74.0 86 59.0 87 43.0 88 27.0 89 20.5 90 14.0 91 14.5 92 15.0 93 11.5 94 8.0 95 5.5 96 3.0 97 2.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1937248.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.39258135036263 #Duplication Level Percentage of deduplicated Percentage of total 1 78.26518856577607 18.30824790426388 2 5.945598248374337 2.7816578140334043 3 2.177545845566839 1.528152550096994 4 1.2898408396797199 1.2069082708491157 5 0.8969255867960281 1.049070237717391 6 0.7030760999357227 0.9868058917945248 7 0.5798022304980125 0.9494149590832524 8 0.5160308326951776 0.9657034586493849 9 0.45684995628121217 0.9618209790496081 >10 7.661192488245687 43.82975464902455 >50 1.3498532813441801 21.3039929786003 >100 0.15565009656179546 4.726976298735012 >500 0.0015564997923066192 0.23214325111943415 >1k 6.670713395599796E-4 0.19864554694714745 >5k 0.0 0.0 >10k+ 2.2235711318665987E-4 0.9707052100360476 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 18662 0.963325294438296 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.161961710632815E-5 0.0 0.0 0.023951502337336263 0.0 2 5.161961710632815E-5 0.0 0.0 0.06385346636052792 0.0 3 5.161961710632815E-5 0.0 0.0 0.10943358826541569 0.0 4 5.161961710632815E-5 0.0 0.0 0.15444589438213382 0.0 5 5.161961710632815E-5 0.0 0.0 0.2788491716083847 0.0 6 5.161961710632815E-5 0.0 0.0 0.46075670229108506 0.0 7 5.161961710632815E-5 0.0 0.0 0.5805142139777664 0.0 8 5.161961710632815E-5 0.0 0.0 0.7877153570425676 0.0 9 5.161961710632815E-5 0.0 0.0 0.9119121558003931 0.0 10 5.161961710632815E-5 0.0 0.0 1.0917549017988404 0.0 11 5.161961710632815E-5 0.0 0.0 1.2886837410594822 0.0 12 5.161961710632815E-5 0.0 0.0 1.447981879449611 0.0 13 5.161961710632815E-5 0.0 0.0 1.5270631328565056 0.0 14 5.161961710632815E-5 0.0 0.0 1.5724883959100744 0.0 15 5.161961710632815E-5 0.0 0.0 1.6198752044136837 0.0 16 5.161961710632815E-5 0.0 0.0 1.7120162209484795 0.0 17 5.161961710632815E-5 0.0 0.0 1.8212949503625762 0.0 18 5.161961710632815E-5 0.0 0.0 1.9466790003138472 0.0 19 5.161961710632815E-5 0.0 0.0 2.0289606699813345 0.0 20 5.161961710632815E-5 0.0 0.0 2.1209984472819174 0.0 21 5.161961710632815E-5 0.0 0.0 2.2292964039709937 0.0 22 5.161961710632815E-5 0.0 0.0 2.3574162936289005 0.0 23 5.161961710632815E-5 0.0 0.0 2.486981532565784 0.0 24 5.161961710632815E-5 0.0 0.0 2.5925952691653316 0.0 25 5.161961710632815E-5 0.0 0.0 2.690569302433142 0.0 26 5.161961710632815E-5 0.0 0.0 2.786323692165381 0.0 27 1.032392342126563E-4 0.0 0.0 2.8908534168056956 0.0 28 1.032392342126563E-4 0.0 0.0 2.9962606749368175 0.0 29 1.032392342126563E-4 0.0 0.0 3.1121983349576308 0.0 30 1.032392342126563E-4 0.0 0.0 3.2585399494540708 0.0 31 1.032392342126563E-4 0.0 0.0 3.3855758271527443 0.0 32 1.032392342126563E-4 0.0 0.0 3.5156056426435853 0.0 33 1.032392342126563E-4 0.0 0.0 3.6492488313318687 0.0 34 1.032392342126563E-4 0.0 0.0 3.792183551099291 0.0 35 1.032392342126563E-4 0.0 0.0 3.937905730190456 0.0 36 1.032392342126563E-4 0.0 0.0 4.08109854804341 0.0 37 1.032392342126563E-4 0.0 0.0 4.232137547696526 0.0 38 1.032392342126563E-4 0.0 0.0 4.416935776937181 0.0 39 1.032392342126563E-4 0.0 0.0 4.6689943672673815 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACTAACG 20 7.034485E-4 45.000004 1 CGTTTTT 8840 0.0 42.098415 1 CGGTCTA 275 0.0 41.727272 31 TAACGCC 55 6.184564E-11 40.909092 12 CTATGCG 45 1.929402E-8 40.0 1 CGCATAT 35 6.250506E-6 38.57143 36 CGCTATC 30 1.14021095E-4 37.499996 23 GGCGATA 555 0.0 37.2973 8 CGAGGGT 170 0.0 37.058823 4 GGGCGAT 2595 0.0 36.936417 7 AGGGCGA 1220 0.0 36.885246 6 TAGGGAT 3350 0.0 36.873135 5 AAGGGAT 3225 0.0 36.55814 5 ACGGGAT 1040 0.0 36.346153 5 ATAGGGA 2875 0.0 36.31304 4 AGGGATC 2125 0.0 36.211765 6 TACGCGG 150 0.0 36.000004 2 GCGTAGT 25 0.0021074645 36.0 32 TCGTCCC 470 0.0 35.904255 38 CGAGGGA 1345 0.0 35.799255 4 >>END_MODULE