##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548103_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2132015 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.537128022082396 31.0 31.0 33.0 30.0 34.0 2 31.972693437897952 31.0 31.0 34.0 30.0 34.0 3 32.061356041116035 33.0 31.0 34.0 30.0 34.0 4 35.75929672164595 37.0 35.0 37.0 35.0 37.0 5 35.65317035761944 37.0 35.0 37.0 33.0 37.0 6 35.70607617676236 37.0 35.0 37.0 33.0 37.0 7 36.06717963991811 37.0 35.0 37.0 35.0 37.0 8 36.09400684329144 37.0 35.0 37.0 35.0 37.0 9 37.88427379732319 39.0 38.0 39.0 35.0 39.0 10 37.34371709392288 39.0 37.0 39.0 34.0 39.0 11 37.03889372260514 39.0 37.0 39.0 33.0 39.0 12 36.47893893804687 39.0 35.0 39.0 32.0 39.0 13 36.26983065316145 39.0 35.0 39.0 32.0 39.0 14 37.31730311465914 40.0 35.0 41.0 32.0 41.0 15 37.516144117184915 40.0 35.0 41.0 32.0 41.0 16 37.62743554806134 40.0 35.0 41.0 33.0 41.0 17 37.572107138082984 39.0 35.0 41.0 33.0 41.0 18 37.476941297317325 39.0 36.0 41.0 32.0 41.0 19 37.44052222897118 39.0 36.0 41.0 32.0 41.0 20 37.32445737952125 39.0 35.0 41.0 32.0 41.0 21 37.18287629308424 39.0 35.0 41.0 32.0 41.0 22 37.13776450916152 39.0 35.0 41.0 32.0 41.0 23 37.05163237594482 39.0 35.0 41.0 32.0 41.0 24 37.06490338951649 39.0 35.0 41.0 32.0 41.0 25 37.05066521577006 39.0 35.0 41.0 32.0 41.0 26 36.91616428589855 39.0 35.0 41.0 31.0 41.0 27 36.856522585441475 39.0 35.0 41.0 31.0 41.0 28 36.80296526994416 39.0 35.0 41.0 31.0 41.0 29 36.75502142339524 39.0 35.0 41.0 31.0 41.0 30 36.66403894906931 38.0 35.0 41.0 31.0 41.0 31 36.6125167974897 39.0 35.0 41.0 31.0 41.0 32 36.50458416099324 39.0 35.0 41.0 30.0 41.0 33 36.41628506366043 39.0 35.0 41.0 30.0 41.0 34 36.29048107072418 39.0 35.0 41.0 30.0 41.0 35 36.18099966463651 38.0 35.0 41.0 30.0 41.0 36 36.03801849424136 38.0 35.0 41.0 29.0 41.0 37 35.97306913881938 38.0 35.0 41.0 29.0 41.0 38 35.87076732574583 38.0 35.0 41.0 29.0 41.0 39 35.82329205000903 38.0 35.0 40.0 29.0 41.0 40 35.69423526569935 38.0 35.0 40.0 28.0 41.0 41 35.626696341254636 38.0 35.0 40.0 28.0 41.0 42 35.57422672917404 38.0 35.0 40.0 27.0 41.0 43 35.508169970661555 38.0 34.0 40.0 27.0 41.0 44 35.3462921227102 38.0 34.0 40.0 27.0 41.0 45 35.32266611632657 38.0 34.0 40.0 27.0 41.0 46 35.24810332009859 38.0 34.0 40.0 27.0 41.0 47 35.185540439443436 38.0 34.0 40.0 27.0 41.0 48 35.070520610783696 38.0 34.0 40.0 26.0 41.0 49 34.97565120320448 37.0 34.0 40.0 26.0 41.0 50 34.82812409856403 37.0 34.0 40.0 26.0 41.0 51 34.46479410323098 37.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 5.0 11 6.0 12 7.0 13 11.0 14 27.0 15 67.0 16 177.0 17 373.0 18 881.0 19 1639.0 20 2809.0 21 4520.0 22 6679.0 23 10170.0 24 14164.0 25 19863.0 26 26283.0 27 31369.0 28 35566.0 29 40256.0 30 48348.0 31 58173.0 32 71843.0 33 93442.0 34 155083.0 35 229684.0 36 144124.0 37 195905.0 38 316839.0 39 623594.0 40 106.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.59632085140114 25.33209194119178 31.044950434213643 14.026636773193434 2 30.588762274186625 26.019188420344136 29.786375799419794 13.605673506049442 3 29.598947474572178 25.97960145683778 30.019629317804984 14.401821750785054 4 27.31885094617064 27.274057640307408 30.242563959446816 15.164527454075136 5 23.780742630797626 31.1540960077673 29.734593799762198 15.330567561672877 6 22.56410015876999 39.88325598084441 26.828704300860924 10.723939559524675 7 88.93731985938184 3.635715508568185 5.568534930570376 1.8584297014795863 8 89.70518500104362 2.8731974212188938 5.484811316993548 1.936806260743944 9 84.06150988618748 6.272563748378881 7.058533828326724 2.6073925371069153 10 41.020067870066576 37.52792546018672 12.364359537808129 9.087647131938565 11 34.36124980358956 21.702802278595602 27.56823943546363 16.367708482351205 12 31.8323276337174 22.311662910439185 28.796420287849756 17.059589167993657 13 23.756164942554346 29.20026360039681 29.196276761655053 17.847294695393796 14 18.498462721885165 33.56327230343126 29.832060281001777 18.1062046936818 15 17.147393428282633 27.922505235657347 38.85413564163479 16.075965694425225 16 21.948719872984007 25.776366488978734 35.8610985382373 16.413815099799955 17 21.629444445747335 24.736739657084964 28.925077919245407 24.708737977922294 18 22.919726174534418 27.330014094647552 31.262866349439378 18.48739338137865 19 26.18888703878725 27.856183000588647 27.507686390574175 18.447243570049928 20 27.53038791940957 27.946144844196684 26.868947920160036 17.654519316233706 21 24.676327324151096 26.914491689786423 30.30349223621785 18.10568874984463 22 24.1745015865273 23.48365278855918 30.16845566283539 22.173389962078126 23 20.980152578663848 27.385454605150528 30.287779401176824 21.346613415008804 24 20.55684411226 26.82518650197114 33.47968940181003 19.138279983958835 25 20.7591410004151 27.943940356892423 31.53383067192304 19.763087970769437 26 20.45215441730007 32.496394256137975 26.82617148566028 20.225279840901685 27 19.06590713479971 31.2917123003356 31.276984448983708 18.365396115880987 28 17.78069103641391 28.862648714948065 34.46293764349688 18.893722605141143 29 18.90141485871347 27.28503317284353 34.129121980849106 19.684429987593894 30 20.28100177531584 27.928508945762577 32.64118685844143 19.149302420480154 31 25.294521849048905 26.888882113868807 27.805667408531363 20.010928628550925 32 25.27561954301447 27.995440932638843 28.60265992500053 18.12627959934616 33 24.215777093500748 27.513596292709007 28.397595701718796 19.873030912071442 34 20.182315790461136 27.712093958063143 30.709211708172784 21.396378543302934 35 20.671383644111323 27.338738235894212 30.426755909315833 21.56312221067863 36 24.692040159192125 26.66106945776648 29.409127046479504 19.23776333656189 37 20.98836077607334 29.066774858525857 29.837313527343852 20.107550838056955 38 20.35529768786805 30.399410885945926 27.586109853823732 21.659181572362296 39 20.269275779016564 28.38314927427809 29.734030951939832 21.613543994765514 40 22.29960858624353 27.360501685025667 28.53474295443512 21.80514677429568 41 19.229789659078385 25.844283459544144 30.118596726570875 24.807330154806603 42 21.402945101230525 26.92959477301989 28.649939142079205 23.017520983670376 43 21.94614015379817 26.872278103109032 28.221893373170452 22.95968836992235 44 20.687987654871094 28.570952831007286 29.946881236764284 20.794178277357336 45 20.200983576569584 30.55456926897794 27.549853073266373 21.694594081186107 46 21.840746899060278 29.55054256184877 28.014671566569653 20.5940389725213 47 21.09933560504968 28.24117091108646 29.236004437116996 21.42348904674686 48 21.436997394483623 26.9893035461758 30.72454931133224 20.84914974800834 49 21.0861086812241 25.92622472168348 31.40742443181685 21.580242165275575 50 19.987617347907964 29.096793409052 29.807998536595665 21.107590706444373 51 18.915157726376222 30.003119115015608 28.880988173160134 22.20073498544804 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1119.0 1 2535.0 2 3951.0 3 8769.0 4 13587.0 5 10297.5 6 7008.0 7 6743.0 8 6478.0 9 6330.0 10 6182.0 11 6421.5 12 6661.0 13 6431.5 14 6202.0 15 5940.0 16 5678.0 17 6070.5 18 6463.0 19 6409.0 20 6355.0 21 8762.5 22 11170.0 23 12954.5 24 14739.0 25 17799.0 26 25963.0 27 31067.0 28 37312.5 29 43558.0 30 47598.0 31 51638.0 32 57403.0 33 63168.0 34 71805.5 35 80443.0 36 87544.0 37 94645.0 38 102314.5 39 109984.0 40 127154.0 41 144324.0 42 158012.5 43 171701.0 44 173455.5 45 175210.0 46 176166.5 47 177123.0 48 174584.0 49 172045.0 50 161519.0 51 150993.0 52 138878.0 53 126763.0 54 113437.0 55 100111.0 56 94490.5 57 88870.0 58 79277.5 59 69685.0 60 62641.5 61 55598.0 62 47398.0 63 39198.0 64 32192.0 65 25186.0 66 21218.5 67 17251.0 68 14329.0 69 11407.0 70 9113.5 71 6820.0 72 5528.0 73 4236.0 74 3175.5 75 1701.0 76 1287.0 77 966.0 78 645.0 79 453.0 80 261.0 81 170.5 82 80.0 83 77.5 84 75.0 85 48.0 86 21.0 87 20.0 88 19.0 89 18.0 90 17.0 91 12.5 92 8.0 93 8.5 94 9.0 95 5.0 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2132015.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.455862810942985 #Duplication Level Percentage of deduplicated Percentage of total 1 81.52294046825548 15.860991456950508 2 7.162899140226497 2.787207660017364 3 2.1794699377602456 1.2721040432891337 4 1.0645471606311525 0.8284673405207437 5 0.6024936929024861 0.5861017316784592 6 0.45358817006260255 0.5294969525642803 7 0.3438144801954954 0.46824451513694626 8 0.2613598709752182 0.4067985435183684 9 0.23152737697938 0.4054108395139467 >10 3.1229118646402756 15.44027866260477 >50 1.7737117168574241 25.264191231861087 >100 1.27662421985089 35.03154603463429 >500 0.00266064160533325 0.32348467872844267 >1k 0.0012093825478787501 0.4480032210495744 >5k 2.4187650957575E-4 0.3476730879321697 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7388 0.34652664263619154 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2867 0.1344737255600922 No Hit AGGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT 2812 0.13189400637425158 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.814239111826136E-4 0.0 0.0 0.015431411129846648 0.0 2 2.814239111826136E-4 0.0 0.0 0.0700276498992737 0.0 3 2.814239111826136E-4 0.0 0.0 0.11796352277071222 0.0 4 2.814239111826136E-4 0.0 0.0 0.20891035006789352 0.0 5 2.814239111826136E-4 0.0 0.0 0.3909447166178474 0.0 6 2.814239111826136E-4 0.0 0.0 0.5540767771333691 0.0 7 3.283278963797159E-4 0.0 0.0 0.6552017692183216 0.0 8 3.283278963797159E-4 0.0 0.0 0.8785585467269227 0.0 9 3.283278963797159E-4 0.0 0.0 0.9522916114567674 0.0 10 3.752318815768182E-4 0.0 0.0 1.0944575905891845 0.0 11 3.752318815768182E-4 0.0 0.0 1.3435177519857975 0.0 12 3.752318815768182E-4 0.0 0.0 1.5470341437560242 0.0 13 3.752318815768182E-4 0.0 0.0 1.6280373261914198 0.0 14 3.752318815768182E-4 0.0 0.0 1.656930181072835 0.0 15 3.752318815768182E-4 0.0 0.0 1.707445773130114 0.0 16 3.752318815768182E-4 0.0 0.0 1.8334298773695308 0.0 17 3.752318815768182E-4 0.0 0.0 1.9771905919986492 0.0 18 3.752318815768182E-4 0.0 0.0 2.153737192280542 0.0 19 3.752318815768182E-4 0.0 0.0 2.2627420538786076 0.0 20 3.752318815768182E-4 0.0 0.0 2.3901332776739377 0.0 21 3.752318815768182E-4 0.0 0.0 2.547730667936201 0.0 22 3.752318815768182E-4 0.0 0.0 2.7174761903645144 0.0 23 3.752318815768182E-4 0.0 0.0 2.887972176555981 0.0 24 3.752318815768182E-4 0.0 0.0 3.0161138641144647 0.0 25 3.752318815768182E-4 0.0 0.0 3.1318259955957157 0.0 26 3.752318815768182E-4 0.0 0.0 3.240080393430628 0.0 27 3.752318815768182E-4 0.0 0.0 3.3647511860845256 0.0 28 3.752318815768182E-4 0.0 0.0 3.4940185692877397 0.0 29 3.752318815768182E-4 0.0 0.0 3.646128193281942 0.0 30 3.752318815768182E-4 0.0 0.0 3.817656067147745 0.0 31 3.752318815768182E-4 0.0 0.0 3.983602366775093 0.0 32 3.752318815768182E-4 0.0 0.0 4.1322410958647104 0.0 33 3.752318815768182E-4 0.0 0.0 4.286273783251994 0.0 34 3.752318815768182E-4 0.0 0.0 4.447811108270814 0.0 35 3.752318815768182E-4 0.0 0.0 4.634582777325676 0.0 36 3.752318815768182E-4 0.0 0.0 4.805782323295099 0.0 37 4.2213586677392046E-4 0.0 0.0 4.976841157308931 0.0 38 4.2213586677392046E-4 0.0 0.0 5.1876745707699055 0.0 39 4.2213586677392046E-4 0.0 0.0 5.501086999856943 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATGCGA 20 7.034645E-4 45.0 34 CGATCTT 20 7.034645E-4 45.0 10 TATCGCC 20 7.034645E-4 45.0 41 TCGGTTA 20 7.034645E-4 45.0 36 CCGTTCG 25 3.8919323E-5 45.0 45 TACGTAA 25 3.8919323E-5 45.0 28 GTCAACG 30 2.16638E-6 44.999996 1 CTCGCTA 30 2.16638E-6 44.999996 21 CGATACG 60 0.0 44.999996 10 CTACGCG 75 0.0 42.0 1 CGTTTTT 4200 0.0 40.92857 1 GGCGATA 490 0.0 40.867348 8 ACGACGG 555 0.0 40.54054 27 TATCGCG 100 0.0 40.5 1 GGGCGAT 2130 0.0 40.24648 7 TTACGAG 140 0.0 40.178574 1 CGGTCTA 560 0.0 40.178574 31 CGTAAGG 265 0.0 39.905663 2 TACGGGA 880 0.0 39.886364 4 ACGGGAC 740 0.0 39.83108 5 >>END_MODULE