##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548101_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2305320 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.58317804035882 31.0 31.0 33.0 30.0 34.0 2 32.004598493918415 31.0 31.0 34.0 30.0 34.0 3 32.09461376294831 33.0 31.0 34.0 30.0 34.0 4 35.78899632155189 37.0 35.0 37.0 35.0 37.0 5 35.68113537383096 37.0 35.0 37.0 33.0 37.0 6 35.74489788836257 37.0 35.0 37.0 33.0 37.0 7 36.11782919507921 37.0 35.0 37.0 35.0 37.0 8 36.14999219197335 37.0 35.0 37.0 35.0 37.0 9 37.97025705758853 39.0 38.0 39.0 35.0 39.0 10 37.403665434733576 39.0 37.0 39.0 35.0 39.0 11 37.06227768813007 39.0 37.0 39.0 33.0 39.0 12 36.4955776204605 39.0 35.0 39.0 33.0 39.0 13 36.282368174483366 39.0 35.0 39.0 32.0 39.0 14 37.309858934985165 39.0 35.0 41.0 32.0 41.0 15 37.53098138219423 40.0 35.0 41.0 33.0 41.0 16 37.65870551593705 40.0 35.0 41.0 33.0 41.0 17 37.61650703589957 40.0 35.0 41.0 33.0 41.0 18 37.54380086061805 39.0 36.0 41.0 33.0 41.0 19 37.51157453195218 39.0 36.0 41.0 33.0 41.0 20 37.39916410736904 39.0 35.0 41.0 32.0 41.0 21 37.2815834678049 39.0 35.0 41.0 32.0 41.0 22 37.20085064112575 39.0 35.0 41.0 32.0 41.0 23 37.11937518435619 39.0 35.0 41.0 32.0 41.0 24 37.14959658528968 39.0 35.0 41.0 32.0 41.0 25 37.140996043933164 39.0 35.0 41.0 32.0 41.0 26 37.0359620356393 39.0 35.0 41.0 32.0 41.0 27 36.98274209220412 39.0 35.0 41.0 32.0 41.0 28 36.952880728055106 39.0 35.0 41.0 32.0 41.0 29 36.9058816129648 39.0 35.0 41.0 31.0 41.0 30 36.8437210452345 39.0 35.0 41.0 31.0 41.0 31 36.77835484878455 39.0 35.0 41.0 31.0 41.0 32 36.68980575364808 39.0 35.0 41.0 31.0 41.0 33 36.61290970450957 39.0 35.0 41.0 31.0 41.0 34 36.53765420852636 39.0 35.0 41.0 30.0 41.0 35 36.43962356635955 39.0 35.0 41.0 30.0 41.0 36 36.29591770339909 38.0 35.0 41.0 30.0 41.0 37 36.23182204639703 38.0 35.0 41.0 30.0 41.0 38 36.13618846841219 38.0 35.0 41.0 30.0 41.0 39 36.09882489198896 38.0 35.0 41.0 30.0 41.0 40 35.969962087692814 38.0 35.0 40.0 29.0 41.0 41 35.918987819478424 38.0 35.0 40.0 29.0 41.0 42 35.89041911751948 38.0 35.0 40.0 29.0 41.0 43 35.8067535092742 38.0 35.0 40.0 29.0 41.0 44 35.64261577568407 38.0 35.0 40.0 28.0 41.0 45 35.629596758801384 38.0 34.0 40.0 28.0 41.0 46 35.568903232523034 38.0 34.0 40.0 28.0 41.0 47 35.501840959172696 38.0 34.0 40.0 28.0 41.0 48 35.38482987177485 38.0 34.0 40.0 28.0 41.0 49 35.286883816563424 37.0 34.0 40.0 27.0 41.0 50 35.140411309492826 37.0 34.0 40.0 27.0 41.0 51 34.7972411639165 37.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 0.0 9 2.0 10 2.0 11 4.0 12 7.0 13 16.0 14 18.0 15 50.0 16 124.0 17 289.0 18 647.0 19 1278.0 20 2330.0 21 3734.0 22 5797.0 23 8656.0 24 12605.0 25 18244.0 26 24183.0 27 29780.0 28 34165.0 29 40041.0 30 49114.0 31 61325.0 32 77312.0 33 100981.0 34 172950.0 35 268290.0 36 155205.0 37 207694.0 38 334818.0 39 695471.0 40 187.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.53653288914337 24.575069838460603 31.492070515156247 12.396326757239775 2 29.295759373969776 26.276352089948467 31.294050283691632 13.133838252390124 3 29.32000763451495 25.61600992486943 31.37963493137612 13.684347509239497 4 26.702583589263096 28.075104540801277 30.687973903839815 14.534337966095814 5 23.624746239133827 32.51140839449621 29.671151944198638 14.192693422171326 6 23.03176999288602 41.43073412801693 25.56790380511165 9.96959207398539 7 90.7777662103309 3.176261863862718 4.630073048427116 1.4158988773792793 8 91.50026894314021 2.5307115714954973 4.477990040428227 1.4910294449360608 9 86.13342182430205 6.059679350372182 5.618135443235646 2.188763382090122 10 41.301251019381255 40.75690142800132 10.510341297520517 7.431506255096906 11 34.92213662311523 20.952405739767148 27.948571131122797 16.17688650599483 12 33.55404022001284 20.895971058247877 28.620148178994675 16.92984054274461 13 23.845713393368385 29.94438949907171 28.35771172765603 17.852185379903872 14 17.028004788923013 33.71640379643607 30.14431835927333 19.111273055367583 15 15.653618586573664 29.020352922804644 39.04438429372061 16.281644196901084 16 20.394088456266374 26.547681016084535 36.72440268596117 16.333827841687924 17 20.689275241615046 26.37017854354276 28.16242430551941 24.778121909322785 18 22.228193916679682 28.319365641212503 31.151076640119374 18.301363801988444 19 25.96199226137803 28.39909426890844 26.991220307809762 18.64769316190377 20 27.602935818020924 28.5327850363507 27.073942012388734 16.79033713323964 21 24.822410771606545 27.49947946488991 30.085801537313696 17.592308226189857 22 23.816129647944752 23.796869848871307 30.074479898669164 22.312520604514773 23 20.54521714989676 27.871705446532367 30.526911665191818 21.056165738379054 24 20.24144153523155 26.470164662606493 34.94356531848073 18.344828483681226 25 19.2683445248382 29.03783422691861 31.716030746273837 19.97779050196936 26 18.633031422969477 34.458296462096364 26.600298440129787 20.308373674804365 27 18.86545034962608 32.84468099873337 30.624555376260126 17.665313275380424 28 16.721062585671405 29.839371540610415 35.11187167074419 18.32769420297399 29 17.870360730831294 27.303454618013983 34.73699963562542 20.0891850155293 30 20.160151302205335 29.713011642635294 31.325586035778112 18.801251019381258 31 25.23502160220707 27.920722502732808 27.819912203078097 19.024343691982022 32 25.691487515832947 28.26271407006403 27.9614543750976 18.084344039005433 33 24.050500581264206 28.290215675047282 28.093236513802854 19.566047229885655 34 19.735871809553554 28.457177311609666 30.267945447920464 21.539005430916315 35 20.985503097183905 26.772075026460534 30.947026876962852 21.29539499939271 36 24.803194350458938 27.454973712976937 28.941448475699687 18.80038346086444 37 20.446272101053218 31.17532490066455 29.816641507469676 18.561761490812557 38 20.124971804348206 31.203043395277014 27.486335953360054 21.185648847014733 39 20.511686013221592 29.146539309076395 29.65540575711832 20.686368920583693 40 22.73233217080492 27.734197421616084 28.09093748373328 21.442532923845715 41 18.635720854371627 26.342676938559507 30.28299758818732 24.738604618881542 42 21.117415369666684 26.65243870699079 28.45500841531761 23.775137508024915 43 21.62970867385005 26.451555532420663 28.774486839137296 23.144248954591987 44 20.031839397567367 29.001006367879512 29.662736626585463 21.304417607967657 45 19.288688772057675 31.98215432130897 26.969704856592575 21.759452050040775 46 21.047186507729947 30.21602207068867 28.041963805458682 20.69482761612271 47 20.595145142539863 28.13913035934274 29.569300574323737 21.69642392379366 48 21.22082834487186 26.412949178422085 31.138670553328822 21.227551923377234 49 20.648369857546893 26.412732288792878 31.613398573733797 21.32549927992643 50 19.267607100098903 30.052010133083478 29.299620009369633 21.38076275744799 51 18.598415838148284 30.111698159040827 28.067166380372356 23.222719622438532 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1004.0 1 2901.5 2 4799.0 3 9883.0 4 14967.0 5 10764.5 6 6562.0 7 6054.0 8 5546.0 9 5738.5 10 5931.0 11 6012.5 12 6094.0 13 6102.0 14 6110.0 15 5855.0 16 5600.0 17 5815.0 18 6030.0 19 6511.0 20 6992.0 21 8810.5 22 10629.0 23 12240.0 24 13851.0 25 17521.5 26 26039.0 27 30886.0 28 40530.5 29 50175.0 30 58419.5 31 66664.0 32 73626.5 33 80589.0 34 87601.5 35 94614.0 36 95222.5 37 95831.0 38 108714.0 39 121597.0 40 143575.5 41 165554.0 42 183612.5 43 201671.0 44 206996.5 45 212322.0 46 203808.5 47 195295.0 48 190419.0 49 185543.0 50 170048.0 51 154553.0 52 139308.0 53 124063.0 54 112628.0 55 101193.0 56 93739.5 57 86286.0 58 79127.5 59 71969.0 60 62664.5 61 53360.0 62 46241.0 63 39122.0 64 31347.0 65 23572.0 66 18831.0 67 14090.0 68 11854.5 69 9619.0 70 7400.0 71 5181.0 72 4026.5 73 2872.0 74 2353.0 75 1353.0 76 872.0 77 598.0 78 324.0 79 237.0 80 150.0 81 129.0 82 108.0 83 74.0 84 40.0 85 37.5 86 35.0 87 24.0 88 13.0 89 12.5 90 12.0 91 8.0 92 4.0 93 2.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2305320.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.248721617828885 #Duplication Level Percentage of deduplicated Percentage of total 1 79.02999742782146 15.21226419945868 2 8.485456882437138 3.266683946602453 3 2.791303089465964 1.6118704836034816 4 1.3000506452380405 1.0009725183706346 5 0.7684404839541646 0.739574847775171 6 0.49419812264171376 0.5707609252070404 7 0.35927071438610947 0.4840851376659712 8 0.29174180370696967 0.44925254110709906 9 0.24372808397614434 0.42223086350132616 >10 3.225113780882772 15.805274995713742 >50 1.7209616806675074 24.394237255030138 >100 1.2838532404829022 34.64620527558782 >500 0.003620950362563909 0.4713807872515052 >1k 0.0020367845789421987 0.5172947831634437 >5k 2.263093976602443E-4 0.4079114399614726 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9364 0.4061908975760415 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.337792584109798E-5 0.0 0.0 0.03535300956049486 0.0 2 4.337792584109798E-5 0.0 0.0 0.14050110179931635 0.0 3 4.337792584109798E-5 0.0 0.0 0.21133725469782938 0.0 4 4.337792584109798E-5 0.0 0.0 0.3279804972845418 0.0 5 4.337792584109798E-5 0.0 0.0 0.6020422327485989 0.0 6 4.337792584109798E-5 0.0 0.0 0.810603300192598 0.0 7 4.337792584109798E-5 0.0 0.0 0.950974268214391 0.0 8 4.337792584109798E-5 0.0 0.0 1.275961688615897 0.0 9 4.337792584109798E-5 0.0 0.0 1.381760449742335 0.0 10 4.337792584109798E-5 0.0 0.0 1.613702219214686 0.0 11 4.337792584109798E-5 0.0 0.0 2.004624086894661 0.0 12 4.337792584109798E-5 0.0 0.0 2.322974684642479 0.0 13 4.337792584109798E-5 0.0 0.0 2.4407023753752193 0.0 14 4.337792584109798E-5 0.0 0.0 2.4900664549823888 0.0 15 4.337792584109798E-5 0.0 0.0 2.570402373640102 0.0 16 4.337792584109798E-5 0.0 0.0 2.75640691964673 0.0 17 4.337792584109798E-5 0.0 0.0 3.000364374577065 0.0 18 4.337792584109798E-5 0.0 0.0 3.2669217288706123 0.0 19 4.337792584109798E-5 0.0 0.0 3.4450314923741607 0.0 20 4.337792584109798E-5 0.0 0.0 3.6481269411621815 0.0 21 4.337792584109798E-5 0.0 0.0 3.8899588777263028 0.0 22 4.337792584109798E-5 0.0 0.0 4.162198740305033 0.0 23 4.337792584109798E-5 0.0 0.0 4.443114188051984 0.0 24 8.675585168219596E-5 0.0 0.0 4.635625422934777 0.0 25 8.675585168219596E-5 0.0 0.0 4.8039317751982376 0.0 26 8.675585168219596E-5 0.0 0.0 4.974103378272864 0.0 27 8.675585168219596E-5 0.0 0.0 5.1533409678482816 0.0 28 8.675585168219596E-5 0.0 0.0 5.334747453715753 0.0 29 8.675585168219596E-5 0.0 0.0 5.547299290337134 0.0 30 8.675585168219596E-5 0.0 0.0 5.8161556747002585 0.0 31 8.675585168219596E-5 0.0 0.0 6.053563062828588 0.0 32 8.675585168219596E-5 0.0 0.0 6.2574826922075895 0.0 33 8.675585168219596E-5 0.0 0.0 6.471856401714295 0.0 34 8.675585168219596E-5 0.0 0.0 6.699026599344125 0.0 35 8.675585168219596E-5 0.0 0.0 6.959120642687349 0.0 36 8.675585168219596E-5 0.0 0.0 7.188893515867646 0.0 37 8.675585168219596E-5 0.0 0.0 7.433067860427186 0.0 38 8.675585168219596E-5 0.0 0.0 7.688997622889664 0.0 39 8.675585168219596E-5 0.0 0.0 8.051723838772926 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAGTCA 20 7.0347654E-4 45.0 35 TGCGGTA 20 7.0347654E-4 45.0 15 CGCGTAG 20 7.0347654E-4 45.0 36 TAGGACG 75 0.0 45.0 1 CGCATCG 60 0.0 44.999996 21 CGACGGT 535 0.0 42.897194 28 TCGTTAG 135 0.0 41.666668 1 TATAGCG 190 0.0 41.447372 1 CGTTTTT 3670 0.0 41.260216 1 CGGGGTA 290 0.0 40.344826 6 GACCGAT 605 0.0 40.165287 9 TACGGGA 1055 0.0 39.66825 4 CGAGGGA 1890 0.0 39.285713 4 TTTACGG 235 0.0 39.255318 2 TAGGGAC 2855 0.0 39.089314 5 TATGGGA 2950 0.0 38.898308 4 GGGCGAT 2335 0.0 38.832977 7 AGGGATT 5320 0.0 38.825188 6 ACGTCGA 35 6.2510244E-6 38.571426 38 TCGTCCC 170 0.0 38.38235 38 >>END_MODULE