##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548100_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1233502 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.62554985723574 31.0 31.0 33.0 30.0 34.0 2 32.05797639566048 33.0 31.0 34.0 30.0 34.0 3 32.14548334741249 33.0 31.0 34.0 30.0 34.0 4 35.8423067007593 37.0 35.0 37.0 35.0 37.0 5 35.757185638936946 37.0 35.0 37.0 35.0 37.0 6 35.81433430995653 37.0 35.0 37.0 35.0 37.0 7 36.13659321184724 37.0 35.0 37.0 35.0 37.0 8 36.172658009472215 37.0 35.0 37.0 35.0 37.0 9 38.00160275378556 39.0 39.0 39.0 35.0 39.0 10 37.47586870552298 39.0 37.0 39.0 35.0 39.0 11 37.13720204750378 39.0 37.0 39.0 33.0 39.0 12 36.645801141789796 39.0 35.0 39.0 33.0 39.0 13 36.45865349225214 39.0 35.0 39.0 32.0 39.0 14 37.48823998663966 40.0 35.0 41.0 32.0 41.0 15 37.685921871225176 40.0 35.0 41.0 33.0 41.0 16 37.802471337703544 40.0 35.0 41.0 33.0 41.0 17 37.735569135680365 40.0 35.0 41.0 33.0 41.0 18 37.64402084471691 39.0 36.0 41.0 33.0 41.0 19 37.60604928082808 39.0 36.0 41.0 33.0 41.0 20 37.50594891617525 39.0 35.0 41.0 33.0 41.0 21 37.38676953908465 39.0 35.0 41.0 32.0 41.0 22 37.32824186746353 39.0 35.0 41.0 32.0 41.0 23 37.24690596367091 39.0 35.0 41.0 32.0 41.0 24 37.27985929491805 39.0 35.0 41.0 32.0 41.0 25 37.268392754936755 39.0 35.0 41.0 32.0 41.0 26 37.163377116534875 39.0 35.0 41.0 32.0 41.0 27 37.11818951246127 39.0 35.0 41.0 32.0 41.0 28 37.082087422638956 39.0 35.0 41.0 32.0 41.0 29 37.0318921250229 39.0 35.0 41.0 32.0 41.0 30 36.944645407952315 39.0 35.0 41.0 32.0 41.0 31 36.879976684269664 39.0 35.0 41.0 31.0 41.0 32 36.76973203124113 39.0 35.0 41.0 31.0 41.0 33 36.67724332834483 39.0 35.0 41.0 31.0 41.0 34 36.574481435782026 39.0 35.0 41.0 30.0 41.0 35 36.46038433662856 39.0 35.0 41.0 30.0 41.0 36 36.32247292667543 39.0 35.0 41.0 30.0 41.0 37 36.26008226983013 39.0 35.0 41.0 30.0 41.0 38 36.1324383746439 39.0 35.0 41.0 30.0 41.0 39 36.07707162209709 38.0 35.0 41.0 30.0 41.0 40 35.96691938886195 38.0 35.0 41.0 29.0 41.0 41 35.88774318971514 38.0 35.0 40.0 29.0 41.0 42 35.852333437643395 38.0 35.0 40.0 29.0 41.0 43 35.77188362888751 38.0 35.0 40.0 29.0 41.0 44 35.610582714904396 38.0 35.0 40.0 28.0 41.0 45 35.58922806772912 38.0 34.0 40.0 28.0 41.0 46 35.524913619921165 38.0 34.0 40.0 28.0 41.0 47 35.45770497331986 38.0 34.0 40.0 28.0 41.0 48 35.33360545828057 38.0 34.0 40.0 27.0 41.0 49 35.236910033384625 38.0 34.0 40.0 27.0 41.0 50 35.08975664409137 37.0 34.0 40.0 27.0 41.0 51 34.73565669127411 37.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 6.0 14 13.0 15 29.0 16 83.0 17 176.0 18 370.0 19 732.0 20 1251.0 21 2012.0 22 3161.0 23 4601.0 24 7082.0 25 10254.0 26 13964.0 27 16423.0 28 18437.0 29 20721.0 30 25016.0 31 30958.0 32 39249.0 33 52182.0 34 88612.0 35 132709.0 36 83451.0 37 114032.0 38 187194.0 39 380712.0 40 72.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.75673651116902 24.585691794581606 30.29034407726943 12.367227616979948 2 30.467076664650726 25.32464479182036 30.973196638513762 13.235081905015154 3 29.698857399501584 25.104134407564803 31.62054054229341 13.57646765064021 4 26.43724939238039 27.825491973259876 31.088397100288446 14.648861534071287 5 23.78496346175361 31.613973872762262 29.5809005579237 15.020162107560425 6 23.286788347323313 40.22409367799971 26.103078876240165 10.38603909843681 7 89.94991495757607 3.3041697540822796 5.324271869846989 1.42164341849466 8 91.09381257590178 2.2478277295051003 5.1209483243642895 1.5374113702288281 9 85.43010064029082 5.622447308557263 6.5491584123900894 2.3982936387618343 10 42.16312579955282 36.85985105820663 12.559687783238294 8.417335359002255 11 32.82726740613311 22.509570312816678 28.464080317664664 16.19908196338555 12 32.523335997833804 21.761618546220436 28.963795761984983 16.75124969396077 13 25.70786265445861 27.555934242506297 28.608790257332377 18.12741284570272 14 18.45898912202818 31.53379564848699 30.872021285737677 19.135193943747154 15 16.955383939385587 29.399141630901287 37.39775046980062 16.24772395991251 16 23.392017199809974 26.30607814174602 34.4706372587965 15.831267399647508 17 23.170209695647028 25.836926085243476 28.39241444278161 22.600449776327885 18 23.37061472133811 27.352124277058326 31.410001767325873 17.86725923427769 19 26.35966540791989 27.987794101671504 27.276891322429957 18.37564916797865 20 27.42265517202242 28.745798547549985 27.534693904022856 16.29685237640474 21 26.501618967784406 26.253382645508477 30.521150350789867 16.72384803591725 22 24.474950182488556 22.934944572444955 31.606434363300583 20.9836708817659 23 21.633527955366105 26.198092909456168 31.439430175224686 20.728948959953044 24 20.982535901846937 25.765503420343055 34.472420798669155 18.779539879140852 25 20.72384155031771 28.35033911578579 31.89050362301804 19.035315710878457 26 19.84398890313919 33.46626110050896 27.43295106128729 19.256798935064555 27 18.944760527344098 32.23521323840578 30.84413320772889 17.975893026521238 28 17.520279659052033 29.102587592075245 34.539222473899514 18.837910274973208 29 18.953353946730527 27.15544847110098 34.340519918086876 19.550677664081615 30 20.280145471997614 28.15658182962006 32.32333632211379 19.239936376268542 31 24.90372938187372 26.81000922576534 29.041785096416543 19.244476295944395 32 25.758450330846642 27.263514773385044 28.84186649069073 18.136168405077576 33 24.33956329215518 27.369067905848553 28.465134227589417 19.82623457440685 34 20.13989438201154 28.034247208354753 30.925851761894187 20.900006647739524 35 21.050472556996258 27.32107446927528 31.370196400167977 20.25825657356048 36 24.942237629124232 27.022250470611315 29.060106915108364 18.975404985156082 37 20.974428902425775 30.12220490927457 29.551958569990155 19.351407618309498 38 20.81869344354529 30.070968672932835 28.57003880009923 20.540299083422646 39 20.551405672629635 29.069592104431123 29.676806361076025 20.702195861863217 40 22.939889842091866 27.032303149893554 28.600602187917 21.427204820097575 41 19.281768493281728 26.387715625917103 30.42832520741758 23.902190673383586 42 20.550027482728037 27.06602826748558 29.000925819333894 23.383018430452484 43 21.13592033089529 27.162258350614753 29.045433246156065 22.65638807233389 44 20.638880196383955 28.4077366716876 29.75252573566966 21.200857396258783 45 19.667499525740535 30.792815901392945 27.805873034660667 21.733811538205856 46 21.650309444167906 29.845269809047736 28.828327801657395 19.676092945126964 47 20.9382716850074 28.436354379644296 29.018518008077816 21.606855927270487 48 21.16478124883462 27.454677819736006 31.250050668746383 20.130490262682997 49 21.529758362775254 26.019982132173276 31.38178940934024 21.068470095711238 50 20.238070145001792 29.051189215745087 29.664240511973226 21.04650012727989 51 19.150272962670513 30.194600414105533 28.823544671998913 21.831581951225047 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 424.0 1 1272.0 2 2120.0 3 5670.0 4 9220.0 5 6764.5 6 4309.0 7 3945.5 8 3582.0 9 3628.5 10 3675.0 11 3703.5 12 3732.0 13 3517.0 14 3302.0 15 3249.0 16 3196.0 17 3218.0 18 3240.0 19 3635.0 20 4030.0 21 4718.0 22 5406.0 23 6605.0 24 7804.0 25 10219.5 26 15243.0 27 17851.0 28 21842.5 29 25834.0 30 28393.5 31 30953.0 32 36362.0 33 41771.0 34 45643.0 35 49515.0 36 53343.5 37 57172.0 38 61770.0 39 66368.0 40 74436.0 41 82504.0 42 91592.5 43 100681.0 44 102230.5 45 103780.0 46 100442.5 47 97105.0 48 95257.0 49 93409.0 50 89288.0 51 85167.0 52 77070.5 53 68974.0 54 63995.5 55 59017.0 56 54010.5 57 49004.0 58 45683.5 59 42363.0 60 37870.5 61 33378.0 62 28228.5 63 23079.0 64 18929.0 65 14779.0 66 12452.5 67 10126.0 68 8048.0 69 5970.0 70 4864.0 71 3758.0 72 2825.0 73 1892.0 74 1453.5 75 834.5 76 654.0 77 514.0 78 374.0 79 280.0 80 186.0 81 128.5 82 71.0 83 56.0 84 41.0 85 30.0 86 19.0 87 15.0 88 11.0 89 7.5 90 4.0 91 2.0 92 0.0 93 1.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1233502.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.816230434518136 #Duplication Level Percentage of deduplicated Percentage of total 1 79.09930047819228 16.46549265963241 2 6.134336457874123 2.55387522539947 3 1.9257741766190577 1.202620770760402 4 1.0481567035206105 0.8727468588787975 5 0.7186074809910623 0.7479349458139283 6 0.5313031279223396 0.6635837004847013 7 0.48093004765993225 0.7007805486481058 8 0.4141380651263924 0.689663471630117 9 0.3462012258392733 0.648594404440467 >10 6.770297566459496 36.65849885847335 >50 2.345991285831926 33.30433608817165 >100 0.1830122934153465 4.762682419711551 >500 7.804362192552087E-4 0.1198123338235215 >1k 7.804362192552087E-4 0.17577890874176308 >5k 3.9021810962760437E-4 0.4335988053898019 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5338 0.4327516291015337 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.03121194777146693 0.0 2 0.0 0.0 0.0 0.100526792822387 0.0 3 0.0 0.0 0.0 0.14000788000343736 0.0 4 0.0 0.0 0.0 0.20032395569686956 0.0 5 0.0 0.0 0.0 0.3533030347741633 0.0 6 0.0 0.0 0.0 0.47507016607999014 0.0 7 0.0 0.0 0.0 0.5558158803147462 0.0 8 0.0 0.0 0.0 0.7516809863299776 0.0 9 0.0 0.0 0.0 0.8166180516934711 0.0 10 0.0 0.0 0.0 0.9647329311180687 0.0 11 8.106999421160241E-5 0.0 0.0 1.2123206934403026 0.0 12 8.106999421160241E-5 0.0 0.0 1.3973224202311791 0.0 13 8.106999421160241E-5 0.0 0.0 1.4740957047495666 0.0 14 8.106999421160241E-5 0.0 0.0 1.5084693822952862 0.0 15 8.106999421160241E-5 0.0 0.0 1.5652994482376195 0.0 16 8.106999421160241E-5 0.0 0.0 1.6947682289935484 0.0 17 8.106999421160241E-5 0.0 0.0 1.8558543074920024 0.0 18 8.106999421160241E-5 0.0 0.0 2.026344505319002 0.0 19 8.106999421160241E-5 0.0 0.0 2.145517396810058 0.0 20 8.106999421160241E-5 0.0 0.0 2.2732837076875434 0.0 21 8.106999421160241E-5 0.0 0.0 2.4355858360991713 0.0 22 8.106999421160241E-5 0.0 0.0 2.6080217137872497 0.0 23 8.106999421160241E-5 0.0 0.0 2.7791604715679425 0.0 24 8.106999421160241E-5 0.0 0.0 2.9110613521502193 0.0 25 8.106999421160241E-5 0.0 0.0 3.030639593612333 0.0 26 8.106999421160241E-5 0.0 0.0 3.1477857352480987 0.0 27 8.106999421160241E-5 0.0 0.0 3.2835779755525327 0.0 28 8.106999421160241E-5 0.0 0.0 3.415803136111656 0.0 29 8.106999421160241E-5 0.0 0.0 3.567322955293141 0.0 30 8.106999421160241E-5 0.0 0.0 3.7760781903880174 0.0 31 8.106999421160241E-5 0.0 0.0 3.943893078406034 0.0 32 8.106999421160241E-5 0.0 0.0 4.08681947820109 0.0 33 8.106999421160241E-5 0.0 0.0 4.239068927330479 0.0 34 8.106999421160241E-5 0.0 0.0 4.4055056254468985 0.0 35 8.106999421160241E-5 0.0 0.0 4.593831222000451 0.0 36 8.106999421160241E-5 0.0 0.0 4.7601868501226585 0.0 37 8.106999421160241E-5 0.0 0.0 4.933676637735488 0.0 38 8.106999421160241E-5 0.0 0.0 5.1388647930850535 0.0 39 8.106999421160241E-5 0.0 0.0 5.46752254961889 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATCGTAG 20 7.0334884E-4 45.0 1 GCGATAT 50 2.1827873E-11 45.0 9 TCGTAAG 40 6.8157533E-9 45.0 1 GGCGATA 175 0.0 43.714287 8 TCACGAC 155 0.0 43.548386 25 CGTTAGG 300 0.0 42.0 2 CGTTTTT 2500 0.0 41.58 1 CGTAAGG 165 0.0 40.909092 2 TAGTCGG 55 6.184564E-11 40.909092 1 TAAGGGA 1785 0.0 40.588234 4 CACGACG 150 0.0 40.5 26 GGGCGAT 980 0.0 39.719387 7 GGTCGAA 40 3.458499E-7 39.375 9 ATAGCGG 260 0.0 38.94231 2 GGCACCG 220 0.0 38.863636 8 AAGGGAT 2370 0.0 38.829117 5 ATGTCGC 35 6.2486597E-6 38.57143 33 TACGCGG 140 0.0 38.57143 2 TACGACG 35 6.2486597E-6 38.57143 1 GCGATAC 35 6.2486597E-6 38.57143 9 >>END_MODULE