SRR1548098_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1548098_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1196110
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4265	0.3565725560358161	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	1869	0.15625653158990394	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TATTGCG	75	0.0	45.000004	1
TCGTGCG	45	3.8562575E-10	45.000004	1
ACAACGC	25	3.8909006E-5	45.0	39
ACACGGC	20	7.0334016E-4	45.0	13
GCGACTT	20	7.0334016E-4	45.0	18
GTCGATA	20	7.0334016E-4	45.0	21
TGGCGTA	20	7.0334016E-4	45.0	31
CGATTGA	55	1.8189894E-12	45.0	10
ACCCTCG	35	1.2119926E-7	45.0	17
CGTTCCA	25	3.8909006E-5	45.0	21
GTAATCG	25	3.8909006E-5	45.0	43
CTACGCA	35	1.2119926E-7	45.0	39
TGCGACC	20	7.0334016E-4	45.0	26
TTGCGAC	20	7.0334016E-4	45.0	43
TCGTATC	25	3.8909006E-5	45.0	21
TCCGTCG	20	7.0334016E-4	45.0	14
CGTGTAA	20	7.0334016E-4	45.0	44
CGTCGGT	20	7.0334016E-4	45.0	16
TTACGCG	20	7.0334016E-4	45.0	1
TAGGCGA	20	7.0334016E-4	45.0	5