##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548097_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2829885 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.557290137231725 31.0 31.0 33.0 30.0 34.0 2 31.98003841145488 31.0 31.0 34.0 30.0 34.0 3 32.07580626067844 33.0 31.0 34.0 30.0 34.0 4 35.78345056424554 37.0 35.0 37.0 35.0 37.0 5 35.693442666398106 37.0 35.0 37.0 33.0 37.0 6 35.749791952676524 37.0 35.0 37.0 33.0 37.0 7 36.100373336725696 37.0 35.0 37.0 35.0 37.0 8 36.130988361717876 37.0 35.0 37.0 35.0 37.0 9 37.970699869429325 39.0 38.0 39.0 35.0 39.0 10 37.39806069857963 39.0 37.0 39.0 35.0 39.0 11 37.03388476916906 39.0 37.0 39.0 33.0 39.0 12 36.603531592273185 39.0 35.0 39.0 33.0 39.0 13 36.43840050037369 39.0 35.0 39.0 32.0 39.0 14 37.520893605217175 40.0 36.0 41.0 32.0 41.0 15 37.703466041906296 40.0 36.0 41.0 33.0 41.0 16 37.79293999579488 40.0 36.0 41.0 33.0 41.0 17 37.72733344287842 40.0 36.0 41.0 33.0 41.0 18 37.65018366470722 39.0 36.0 41.0 33.0 41.0 19 37.620759147456525 39.0 36.0 41.0 33.0 41.0 20 37.52122542082099 39.0 35.0 41.0 33.0 41.0 21 37.405797055357375 39.0 35.0 41.0 32.0 41.0 22 37.322207086153675 39.0 35.0 41.0 32.0 41.0 23 37.229258786134416 39.0 35.0 41.0 32.0 41.0 24 37.24333780347965 39.0 35.0 41.0 32.0 41.0 25 37.22931461879193 39.0 35.0 41.0 32.0 41.0 26 37.121255104005996 39.0 35.0 41.0 32.0 41.0 27 37.07829116730892 39.0 35.0 41.0 32.0 41.0 28 37.028767953468076 39.0 35.0 41.0 32.0 41.0 29 36.97750685981939 39.0 35.0 41.0 31.0 41.0 30 36.91609729723999 39.0 35.0 41.0 31.0 41.0 31 36.862693360330894 39.0 35.0 41.0 31.0 41.0 32 36.779980458569874 39.0 35.0 41.0 31.0 41.0 33 36.693951167626956 39.0 35.0 41.0 31.0 41.0 34 36.59734582854074 39.0 35.0 41.0 30.0 41.0 35 36.49725624892884 39.0 35.0 41.0 30.0 41.0 36 36.37350987760987 39.0 35.0 41.0 30.0 41.0 37 36.31013592425134 39.0 35.0 41.0 30.0 41.0 38 36.21405145438772 39.0 35.0 41.0 30.0 41.0 39 36.14983612408278 39.0 35.0 41.0 30.0 41.0 40 36.02315217756198 38.0 35.0 41.0 29.0 41.0 41 35.964252610971826 38.0 35.0 40.0 29.0 41.0 42 35.92325730550888 38.0 35.0 40.0 29.0 41.0 43 35.84229889200444 38.0 35.0 40.0 29.0 41.0 44 35.69556148041352 38.0 35.0 40.0 28.0 41.0 45 35.65176535442253 38.0 35.0 40.0 28.0 41.0 46 35.57349291578986 38.0 34.0 40.0 28.0 41.0 47 35.50253561540487 38.0 34.0 40.0 28.0 41.0 48 35.38768925239012 38.0 34.0 40.0 27.0 41.0 49 35.286131768605436 38.0 34.0 40.0 27.0 41.0 50 35.14306765115897 38.0 34.0 40.0 27.0 41.0 51 34.78198407355776 37.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 4.0 11 7.0 12 11.0 13 10.0 14 21.0 15 52.0 16 156.0 17 323.0 18 708.0 19 1534.0 20 2777.0 21 4576.0 22 7283.0 23 10985.0 24 15948.0 25 22690.0 26 30791.0 27 36884.0 28 42152.0 29 49700.0 30 60344.0 31 73899.0 32 92291.0 33 119726.0 34 199069.0 35 294252.0 36 195644.0 37 263382.0 38 434569.0 39 869948.0 40 148.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.872602596925315 24.65810448127751 30.781215491088858 12.688077430708313 2 29.152280039648254 25.799493618998653 31.699804055641838 13.348422285711257 3 29.06513868938137 25.734649994611086 31.53106928373414 13.669142032273395 4 26.04526332342127 27.90901397053237 31.165436051288303 14.880286654758054 5 23.612408278074902 32.629700500197 29.368331221940114 14.389559999787977 6 22.113725469409534 41.426453725151376 26.089434729679827 10.370386075759262 7 91.21731095079836 2.915242138814828 4.568418858010132 1.2990280523766866 8 92.42280163328192 2.1198741291607255 4.28144606582953 1.1758781717278264 9 87.6872735111144 5.135509040120005 5.227138205262758 1.950079243502828 10 42.37914261533596 39.153463833335984 10.48639785715674 7.980995694171318 11 30.863869026479872 23.570003728066688 28.37026946324674 17.195857782206698 12 31.510079031480075 21.984320917634463 28.62964396079699 17.875956090088465 13 24.377916417098223 28.15531373183009 28.760956717322433 18.705813133749253 14 18.165649840894595 32.32180813001235 29.615761771238052 19.896780257855003 15 16.977403675414372 28.938667118981865 37.11673795931637 16.967191246287396 16 21.978843663258402 26.814234500695257 35.189203801567906 16.017718034478435 17 21.964991510255715 26.150779978691713 28.37595874037284 23.50826977067973 18 22.07768160190255 28.510310489648873 30.592550580677308 18.819457327771268 19 25.639699139717692 27.69077188649009 27.564901047215702 19.104627926576523 20 27.26778650015813 28.13361673707589 27.677555801737526 16.921040961028453 21 25.776135779369124 26.62344936278329 30.188894601724098 17.411520256123485 22 24.573790101011173 23.85012111799596 29.89435966479203 21.681729116200835 23 21.213900918235193 27.46210535057078 30.525763414414364 20.798230316779655 24 20.736390348017675 26.243080549209598 34.181707030497705 18.838822072275022 25 20.5594927002334 28.519180108025594 31.461349136095635 19.459978055645372 26 20.153575145279756 34.284043344517535 26.378598423610853 19.18378308659186 27 19.46881233689708 32.23943729162139 30.080586313578113 18.21116405790341 28 18.024336677992213 30.143451058965294 33.46157175998318 18.370640503059313 29 19.01119656805842 27.33605782567136 33.676668839899854 19.976076766370365 30 20.501433803847153 28.331221940114176 31.09133410014895 20.076010155889726 31 24.307206829959522 27.72617968574695 28.307616740609596 19.658996743683932 32 24.685914798657898 28.17036734708301 28.656959558427285 18.48675829583181 33 23.773192196856055 28.30797011185967 28.06693558218797 19.851902109096304 34 20.402489853827984 28.7705684153243 29.605266645111023 21.2216750857367 35 20.739040632393188 27.22008138139889 30.79061516634068 21.25026281986724 36 23.629582120828232 27.220046044273882 29.156379146149046 19.993992688748836 37 21.368854211390214 30.111188263834045 29.084927479385204 19.435030045390537 38 20.705470363636685 30.73616065670513 27.269093973783388 21.289275005874796 39 20.745825360394505 29.49229385646413 28.33528570948996 21.426595073651402 40 22.323734003325225 27.656176841108383 28.591409191539586 21.428679964026806 41 19.280076752235516 26.97925887447723 29.66512773487262 24.075536638414636 42 20.54136475510489 27.38153670555517 28.54819188765621 23.528906651683727 43 21.26121732861936 27.102691452126148 28.83297377808639 22.803117441168105 44 20.11159464077162 29.537737399222934 29.354408394687415 20.996259565318027 45 20.079932576765486 30.807364963593926 27.231353924276075 21.881348535364513 46 20.999934626318737 29.993374289061215 28.007357189426425 20.99933389519362 47 20.40432738432834 28.65929180867774 28.870749164718706 22.065631642275214 48 21.275069481622044 26.929892910842668 30.459364956526503 21.335672651008785 49 20.590377347489387 26.875791772457188 30.518625315162986 22.015205564890447 50 19.778506900457085 29.779195974394717 29.25072926991733 21.19156785523087 51 19.426690483888923 30.213135869478798 28.520063536150765 21.840110110481522 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1326.0 1 2822.0 2 4318.0 3 12391.5 4 20465.0 5 14591.0 6 8717.0 7 8141.0 8 7565.0 9 7778.5 10 7992.0 11 7827.5 12 7663.0 13 7654.5 14 7646.0 15 7450.0 16 7254.0 17 7703.0 18 8152.0 19 8281.0 20 8410.0 21 10744.0 22 13078.0 23 15141.0 24 17204.0 25 22063.0 26 34103.5 27 41285.0 28 48208.0 29 55131.0 30 65398.5 31 75666.0 32 82975.0 33 90284.0 34 98162.5 35 106041.0 36 114826.0 37 123611.0 38 137257.5 39 150904.0 40 174233.0 41 197562.0 42 215368.0 43 233174.0 44 238970.5 45 244767.0 46 239505.0 47 234243.0 48 225993.5 49 217744.0 50 209130.5 51 200517.0 52 179153.5 53 157790.0 54 144353.0 55 130916.0 56 123329.5 57 115743.0 58 106356.0 59 96969.0 60 87451.0 61 77933.0 62 65034.0 63 52135.0 64 43144.0 65 34153.0 66 26839.5 67 19526.0 68 15718.0 69 11910.0 70 9714.0 71 7518.0 72 5659.5 73 3801.0 74 2848.5 75 1391.0 76 886.0 77 657.5 78 429.0 79 390.0 80 351.0 81 241.0 82 131.0 83 102.5 84 74.0 85 54.5 86 35.0 87 32.0 88 29.0 89 20.5 90 12.0 91 8.0 92 4.0 93 3.0 94 2.0 95 1.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2829885.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.87667936963043 #Duplication Level Percentage of deduplicated Percentage of total 1 80.34914146459637 15.167249810522634 2 7.304371407136282 2.757645540984157 3 2.2019487299065332 1.2469644048843176 4 1.0635307127757905 0.8030371305929245 5 0.6504033541075307 0.6138727788210031 6 0.4745590148624573 0.5374859019315774 7 0.34610349642663457 0.4573299311527529 8 0.27346617037599097 0.4129706573302648 9 0.2532122680865959 0.4301826117414818 >10 3.81823511007229 18.66820525387937 >50 2.1347014022326656 29.375119929666653 >100 1.1267457178787026 28.566205545043733 >500 0.002450261581606727 0.30452133418321686 >1k 9.424083006179721E-4 0.21411489532826256 >5k 0.0 0.0 >10k+ 1.8848166012359438E-4 0.4450942739376146 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12510 0.44206743383565056 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.067425001369313E-5 0.0 0.0 0.02254508575436811 0.0 2 7.067425001369313E-5 0.0 0.0 0.06774126863812487 0.0 3 7.067425001369313E-5 0.0 0.0 0.10226563976981397 0.0 4 7.067425001369313E-5 0.0 0.0 0.15884037690577532 0.0 5 7.067425001369313E-5 0.0 0.0 0.31033063181012654 0.0 6 7.067425001369313E-5 0.0 0.0 0.44987693846216364 0.0 7 7.067425001369313E-5 0.0 0.0 0.5468420094809506 0.0 8 7.067425001369313E-5 0.0 0.0 0.752433402770784 0.0 9 7.067425001369313E-5 0.0 0.0 0.8277721532853809 0.0 10 7.067425001369313E-5 0.0 0.0 0.9687319449376918 0.0 11 7.067425001369313E-5 0.0 0.0 1.2139362553602002 0.0 12 7.067425001369313E-5 0.0 0.0 1.405816844147377 0.0 13 7.067425001369313E-5 0.0 0.0 1.4818270000371039 0.0 14 7.067425001369313E-5 0.0 0.0 1.5144785035434303 0.0 15 7.067425001369313E-5 0.0 0.0 1.5619362624276252 0.0 16 7.067425001369313E-5 0.0 0.0 1.6727181493240892 0.0 17 7.067425001369313E-5 0.0 0.0 1.8200032863526256 0.0 18 7.067425001369313E-5 0.0 0.0 1.982271364384065 0.0 19 7.067425001369313E-5 0.0 0.0 2.096728312281241 0.0 20 7.067425001369313E-5 0.0 0.0 2.2205849354302383 0.0 21 7.067425001369313E-5 0.0 0.0 2.3820755967115272 0.0 22 7.067425001369313E-5 0.0 0.0 2.569574381997855 0.0 23 7.067425001369313E-5 0.0 0.0 2.75912272053458 0.0 24 7.067425001369313E-5 0.0 0.0 2.8927323901854667 0.0 25 7.067425001369313E-5 0.0 0.0 3.008108103332821 0.0 26 7.067425001369313E-5 0.0 0.0 3.1238018506052367 0.0 27 7.067425001369313E-5 0.0 0.0 3.240944420002933 0.0 28 7.067425001369313E-5 0.0 0.0 3.3699956005279366 0.0 29 7.067425001369313E-5 0.0 0.0 3.521697878182329 0.0 30 7.067425001369313E-5 0.0 0.0 3.721882691346115 0.0 31 7.067425001369313E-5 0.0 0.0 3.8967661230049986 0.0 32 7.067425001369313E-5 0.0 0.0 4.0517194161600205 0.0 33 7.067425001369313E-5 0.0 0.0 4.205753944064865 0.0 34 7.067425001369313E-5 0.0 0.0 4.37703298897305 0.0 35 7.067425001369313E-5 0.0 0.0 4.566652001759789 0.0 36 7.067425001369313E-5 0.0 0.0 4.745139820169371 0.0 37 7.067425001369313E-5 0.0 0.0 4.9259598888294045 0.0 38 7.067425001369313E-5 0.0 0.0 5.1241304858678 0.0 39 7.067425001369313E-5 0.0 0.0 5.411209289423422 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATCGCG 55 1.8189894E-12 45.0 1 AATCGGC 30 2.1666328E-6 44.999996 41 CGACGGT 380 0.0 42.039474 28 CGTAAGG 515 0.0 39.757286 2 CGTTTTT 5535 0.0 39.5122 1 TACGGGA 1710 0.0 39.473686 4 TCGCACG 40 3.4606092E-7 39.375 1 AGGGATT 6350 0.0 39.11811 6 TAGGGAC 3955 0.0 39.02655 5 CGTTAGG 515 0.0 38.8835 2 ACGGGAC 1245 0.0 38.855423 5 CACGACG 390 0.0 38.653847 26 GACCGAT 845 0.0 38.60947 9 GTCGATC 35 6.2515282E-6 38.571426 23 TTAGGGA 5090 0.0 38.36935 4 ACGGGAT 1555 0.0 37.909966 5 ATAGGGA 4405 0.0 37.849033 4 TAGGGAT 5690 0.0 37.72408 5 AAGGGAT 5045 0.0 37.552032 5 CGAAACG 30 1.14034396E-4 37.499996 42 >>END_MODULE